iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mga-059528

UUCD1 version

UUC-MeG-00706

Ensembl Protein ID

ENSMGAP00000016521.1

UniProt Accession

G1NRB9; G1NRB9_MELGA

Protein Name

Uncharacterized protein

Gene Name

TRIM13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000015580.1	ENSMGAT00000017495.1	ENSMGAP00000016521.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-08	33.6	10	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C+iC++ f+d p+vlpC H f+++Cl+ +    +         f+CP+Cr
   Q: 10   CPICCSLFDD-PRVLPCSHNFCRKCLEGIldgnVRNVLWRPSPFKCPTCR 58
           ********99.**************96665655455556999999****8 PP

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

MELLEEDLTC PICCSLFDDP RVLPCSHNFC RKCLEGILDG NVRNVLWRPS PFKCPTCRKE 60
TPVTGINSLQ VNYSLKGIVE KYNKIKITPK MPVCKVHSGQ PLNIFCRTDM QLICGVCATR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCTCC TAGAAGAAGA TCTCACCTGT CCCATTTGCT GTAGCCTGTT TGATGATCCT 60
CGTGTCCTGC CCTGCTCACA CAACTTCTGC AGAAAGTGTC TAGAGGGAAT ACTGGATGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0097038--C:perinuclear endoplasmic reticulum
GO:0004871--F:signal transducer activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045087--P:innate immune response
GO:1902187--P:negative regulation of viral release from host cell
GO:0032897--P:negative regulation of viral transcription
GO:0010942--P:positive regulation of cell death
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0016239--P:positive regulation of macroautophagy
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0051865--P:protein autoubiquitination
GO:0010332--P:response to gamma radiation
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000827	Aegilops tauschii	39.62	9.00e-06	43.90
IUUC-Aml-002269	Ailuropoda melanoleuca	74.75	2.00e-175	607.00
IUUC-Apl-004168	Anas platyrhynchos	94.12	0.00e+00	776.00
IUUC-Aca-004395	Anolis carolinensis	77.70	0.00e+00	663.00
IUUC-Ame-011325	Astyanax mexicanus	48.15	3.00e-69	255.00
IUUC-Bta-012613	Bos taurus	74.51	1.00e-174	605.00
IUUC-Cja-018856	Callithrix jacchus	74.75	0.00e+00	636.00
IUUC-Cfa-021019	Canis familiaris	74.26	7.00e-173	599.00
IUUC-Cpo-021845	Cavia porcellus	74.51	2.00e-174	604.00
IUUC-Csa-023380	Chlorocebus sabaeus	75.49	2.00e-177	614.00
IUUC-Cho-024733	Choloepus hoffmanni	62.16	9.00e-66	243.00
IUUC-Dre-028675	Danio rerio	52.21	5.00e-117	414.00
IUUC-Dno-030018	Dasypus novemcinctus	75.00	0.00e+00	626.00
IUUC-Dor-030599	Dipodomys ordii	68.03	3.00e-97	347.00
IUUC-Ete-033134	Echinops telfairi	74.51	0.00e+00	627.00
IUUC-Eca-033931	Equus caballus	75.00	8.00e-174	602.00
IUUC-Eeu-034903	Erinaceus europaeus	73.77	8.00e-173	599.00
IUUC-Fca-035642	Felis catus	75.74	1.00e-174	605.00
IUUC-Fal-037108	Ficedula albicollis	94.85	0.00e+00	813.00
IUUC-Gga-040903	Gallus gallus	97.50	0.00e+00	819.00
IUUC-Ggo-044635	Gorilla gorilla	75.25	4.00e-177	613.00
IUUC-Hsa-046345	Homo sapiens	75.25	5.00e-177	613.00
IUUC-Itr-048220	Ictidomys tridecemlineatus	75.43	1.00e-168	585.00
IUUC-Lch-050599	Latimeria chalumnae	63.68	1.00e-151	529.00
IUUC-Loc-052378	Lepisosteus oculatus	63.73	1.00e-118	418.00
IUUC-Laf-053332	Loxodonta africana	75.98	3.00e-180	623.00
IUUC-Mcc-054705	Macaca mulatta	75.00	4.00e-176	610.00
IUUC-Meu-056825	Macropus eugenii	76.23	0.00e+00	649.00
IUUC-Mmr-060688	Microcebus murinus	75.00	4.00e-175	606.00
IUUC-Mdo-061882	Monodelphis domestica	75.25	0.00e+00	647.00
IUUC-Mmu-064352	Mus musculus	72.79	4.00e-177	613.00
IUUC-Mpu-066712	Mustela putorius furo	75.20	3.00e-162	564.00
IUUC-Mlu-068093	Myotis lucifugus	74.33	6.00e-173	599.00
IUUC-Nle-069310	Nomascus leucogenys	75.00	4.00e-176	610.00
IUUC-Ont-071759	Oreochromis niloticus	60.71	2.00e-113	402.00
IUUC-Oan-073673	Ornithorhynchus anatinus	74.02	0.00e+00	643.00
IUUC-Ocu-074192	Oryctolagus cuniculus	74.51	2.00e-176	611.00
IUUC-Obr-076671	Oryza brachyantha	40.00	5.00e-06	44.70
IUUC-Ogl-076954	Oryza glaberrima	38.60	2.00e-06	46.60
IUUC-Ola-087424	Oryzias latipes	58.51	2.00e-113	402.00
IUUC-Oga-088808	Otolemur garnettii	75.00	1.00e-175	608.00
IUUC-Oar-089553	Ovis aries	74.75	7.00e-175	605.00
IUUC-Ptr-090518	Pan troglodytes	75.00	2.00e-175	607.00
IUUC-Pan-092781	Papio anubis	75.00	3.00e-176	610.00
IUUC-Psi-093914	Pelodiscus sinensis	89.49	0.00e+00	774.00
IUUC-Pma-094162	Petromyzon marinus	36.00	4.00e-43	167.00
IUUC-Pfo-096346	Poecilia formosa	48.17	4.00e-111	394.00
IUUC-Pca-100914	Procavia capensis	74.26	0.00e+00	629.00
IUUC-Pva-102728	Pteropus vampyrus	74.51	4.00e-174	603.00
IUUC-Rno-105922	Rattus norvegicus	73.04	1.00e-169	588.00
IUUC-Sha-107124	Sarcophilus harrisii	75.00	0.00e+00	652.00
IUUC-Sja-107830	Schizosaccharomyces japonicus	37.21	6.00e-08	51.60
IUUC-Sar-113607	Sorex araneus	73.53	7.00e-169	586.00
IUUC-Ssc-116355	Sus scrofa	75.49	1.00e-176	611.00
IUUC-Tgu-116476	Taeniopygia guttata	94.85	0.00e+00	810.00
IUUC-Tru-118737	Takifugu rubripes	58.44	6.00e-113	400.00
IUUC-Tsy-118908	Tarsius syrichta	74.26	7.00e-178	615.00
IUUC-Tni-119737	Tetraodon nigroviridis	33.12	7.00e-49	186.00
IUUC-Tbe-127258	Tupaia belangeri	75.49	8.00e-177	612.00
IUUC-Ttr-128921	Tursiops truncatus	35.26	3.00e-52	198.00
IUUC-Vpa-130138	Vicugna pacos	74.75	3.00e-175	607.00
IUUC-Xtr-132100	Xenopus tropicalis	57.32	8.00e-138	483.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence