iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           CaiC++d+k   +++pC H+fha Cl+kw       + +++CPlC
   Q: 537  CAICYQDMKS-AVITPCSHFFHAGCLKKW------LYVQDTCPLC 574
           ********99.888***************......********** PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAAKEKLEAV LNVALRVPSI MLLDVLYRWD VSSFFQQIQR SSLSNNPLFQ YKYLALNMHY 60
VGYILSVVLL TLPRQHLVQL YLYFLTALLL YAGHQISRDY VRSELESAYE GPMYLEPLSM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAGACCAA ACATGGCTGC AAAGGAGAAG CTGGAGGCAG TGTTGAACGT GGCCTTGAGG 60
GTGCCAAGCA TCATGCTGCT GGACGTCCTG TACAGGTGGG ACGTCAGCTC CTTTTTCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025754--TRC8_N_dom
IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13705--TRC8_N
PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

rno:287212

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002354	Ailuropoda melanoleuca	95.46	0.00e+00	1190.00
IUUC-Apl-003823	Anas platyrhynchos	89.67	0.00e+00	1116.00
IUUC-Aca-004944	Anolis carolinensis	92.78	0.00e+00	1104.00
IUUC-Ame-011578	Astyanax mexicanus	88.79	0.00e+00	1008.00
IUUC-Bta-012560	Bos taurus	89.41	0.00e+00	1154.00
IUUC-Cel-018539	Caenorhabditis elegans	28.33	1.00e-62	234.00
IUUC-Cja-018929	Callithrix jacchus	93.36	0.00e+00	1164.00
IUUC-Cfa-021110	Canis familiaris	95.01	0.00e+00	1184.00
IUUC-Cpo-022452	Cavia porcellus	94.28	0.00e+00	1174.00
IUUC-Csa-024116	Chlorocebus sabaeus	94.13	0.00e+00	1176.00
IUUC-Csv-025845	Ciona savignyi	41.25	2.00e-33	134.00
IUUC-Dre-028299	Danio rerio	88.62	0.00e+00	1041.00
IUUC-Dno-029615	Dasypus novemcinctus	93.80	0.00e+00	1171.00
IUUC-Ete-032551	Echinops telfairi	70.08	0.00e+00	830.00
IUUC-Eca-033349	Equus caballus	97.12	0.00e+00	1122.00
IUUC-Eeu-035349	Erinaceus europaeus	98.04	0.00e+00	711.00
IUUC-Fca-035696	Felis catus	94.86	0.00e+00	1182.00
IUUC-Fal-037495	Ficedula albicollis	89.83	0.00e+00	1093.00
IUUC-Gmo-039374	Gadus morhua	83.07	0.00e+00	1006.00
IUUC-Gga-040146	Gallus gallus	91.03	0.00e+00	1114.00
IUUC-Gac-041731	Gasterosteus aculeatus	83.94	0.00e+00	1025.00
IUUC-Ggo-045158	Gorilla gorilla	94.38	0.00e+00	1170.00
IUUC-Hsa-045787	Homo sapiens	94.43	0.00e+00	1181.00
IUUC-Itr-048928	Ictidomys tridecemlineatus	94.40	0.00e+00	1079.00
IUUC-Lch-050499	Latimeria chalumnae	91.83	0.00e+00	1054.00
IUUC-Loc-052482	Lepisosteus oculatus	90.08	0.00e+00	1041.00
IUUC-Laf-053362	Loxodonta africana	95.02	0.00e+00	1178.00
IUUC-Mcc-055779	Macaca mulatta	94.07	0.00e+00	1162.00
IUUC-Meu-056130	Macropus eugenii	69.47	1.00e-144	506.00
IUUC-Mga-059742	Meleagris gallopavo	90.67	0.00e+00	1107.00
IUUC-Mmr-060812	Microcebus murinus	95.03	0.00e+00	1191.00
IUUC-Mdo-063045	Monodelphis domestica	91.83	0.00e+00	1113.00
IUUC-Mmu-064377	Mus musculus	96.54	0.00e+00	1234.00
IUUC-Mpu-066637	Mustela putorius furo	94.70	0.00e+00	1179.00
IUUC-Mlu-066985	Myotis lucifugus	94.74	0.00e+00	1161.00
IUUC-Nle-069833	Nomascus leucogenys	94.07	0.00e+00	1165.00
IUUC-Opr-070210	Ochotona princeps	82.01	3.00e-130	459.00
IUUC-Ont-072116	Oreochromis niloticus	83.26	0.00e+00	1038.00
IUUC-Oan-073730	Ornithorhynchus anatinus	91.28	0.00e+00	1130.00
IUUC-Ocu-074958	Oryctolagus cuniculus	93.52	0.00e+00	1174.00
IUUC-Ola-087368	Oryzias latipes	88.97	0.00e+00	1021.00
IUUC-Oga-088301	Otolemur garnettii	94.66	0.00e+00	1174.00
IUUC-Oar-089745	Ovis aries	94.13	0.00e+00	1176.00
IUUC-Ptr-091397	Pan troglodytes	94.43	0.00e+00	1180.00
IUUC-Pan-092817	Papio anubis	94.28	0.00e+00	1178.00
IUUC-Psi-093820	Pelodiscus sinensis	87.35	0.00e+00	1066.00
IUUC-Pma-094457	Petromyzon marinus	66.67	5.00e-171	593.00
IUUC-Pfo-097173	Poecilia formosa	83.46	0.00e+00	1032.00
IUUC-Pab-097630	Pongo abelii	94.13	0.00e+00	1175.00
IUUC-Pca-100472	Procavia capensis	92.31	0.00e+00	1157.00
IUUC-Pva-102485	Pteropus vampyrus	92.90	0.00e+00	1093.00
IUUC-Sha-106580	Sarcophilus harrisii	93.93	0.00e+00	1141.00
IUUC-Ssc-116438	Sus scrofa	91.83	0.00e+00	1047.00
IUUC-Tgu-116638	Taeniopygia guttata	89.79	0.00e+00	1094.00
IUUC-Tru-117779	Takifugu rubripes	86.13	0.00e+00	1033.00
IUUC-Tsy-119541	Tarsius syrichta	92.80	0.00e+00	1116.00
IUUC-Tni-119862	Tetraodon nigroviridis	88.15	0.00e+00	1032.00
IUUC-Tbe-127328	Tupaia belangeri	88.70	0.00e+00	1040.00
IUUC-Ttr-129066	Tursiops truncatus	95.60	7.00e-180	624.00
IUUC-Xtr-132826	Xenopus tropicalis	84.51	0.00e+00	1086.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence