iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114859

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G139100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g021450	Sb07g021450.1	Sb07g021450.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	2.10e-28	99.0	119	166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadm+kgktpeeiR+tF i+nD+t+eEe+++R En+WA
   Q: 119  KGLLDLTCQTVADMMKGKTPEEIRETFHIKNDLTEEEEEAIRTENRWA 166
           89*********************************************9 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAASSEAEKT KKMVTLRSSD SEEFEVEEAV AMESQTIRHM IEDDCADNGI PLPNVNSKIL 60
AKVIEYCNKH VHAAAAQHAG LAAAAYDGED LKSWDAEFVK VDQATLFDLI LAANYLNIKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGT CTTCCGAGGC TGAGAAGACG AAGAAGATGG TTACGTTGAG GAGCTCCGAC 60
TCGGAGGAGT TCGAGGTGGA GGAGGCGGTG GCGATGGAGT CGCAGACCAT CCGCCACATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_07g021450

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024854	Choloepus hoffmanni	42.25	4.00e-11	59.30
IUUC-Eeu-034817	Erinaceus europaeus	70.73	8.00e-14	67.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence