iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048388

Ensembl Protein ID

ENSSTOP00000000551.2

UniProt Accession

I3LX08; I3LX08_ICTTR

Genbank Protein ID

ENSSTOP00000000551

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01066249

Gene Name

PSMD4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000000605.2	ENSSTOT00000000606.2	ENSSTOP00000000551.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	1.00e-05	25.1	279	296
UBD/Alpha-Helix/UIM	3.7e-05	14.0	207	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEee 18
           +E+e+++ A+++Slq +e
   Q: 279  TEEEQIAYAMQMSLQGAE 296
           59*************998 PP

UBD/Alpha-Helix/UIM

   S: 3    deeLqlAlalSlqEeees 20
           d+eL+lAl++S++E++++
   Q: 207  DPELALALRVSMEEQRQR 224
           99*************985 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MVCVDNSEYM RNGDFLPTRL QAQQDAVNIV CHSKTRSNPE NNVGLITLAN DCEVLTTLTP 60
DTGRILSKLH TVQPKGKITF CTGIRVAHLA LKHRQGKNHK MRIIAFVGSP VEDNEKDLVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAGGGAGG AAGGTGGCAA GATGGTGTTG GAGAGCACTA TGGTTTGGTG AGGAACTACT 60
TTGGGGCCCG TGGGGGCGTG ACTGGGTCGG GGGTGCGCAC AGCATCTAGG TCGGCTGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027040--Proteasome_su_Rpn10
IPR003903--UIM_dom
IPR002035--VWF_A

PROSITE

PS50330--UIM
PS50234--VWFA

Pfam

PF02809--UIM
PF13519--VWA_2

SMART

SM00726--UIM
SM00327--VWA

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0008540--C:proteasome regulatory particle, base subcomplex
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001241	Ailuropoda melanoleuca	98.06	2.00e-179	620.00
IUUC-Atr-002938	Amborella trichopoda	42.09	2.00e-58	219.00
IUUC-Apl-003881	Anas platyrhynchos	97.13	3.00e-110	390.00
IUUC-Aca-004397	Anolis carolinensis	97.25	4.00e-117	413.00
IUUC-Aly-005564	Arabidopsis lyrata	40.74	4.00e-53	201.00
IUUC-Ath-007436	Arabidopsis thaliana	40.91	2.00e-52	199.00
IUUC-Ago-007858	Ashbya gossypii	50.45	9.00e-56	209.00
IUUC-Acl-008094	Aspergillus clavatus	44.89	2.00e-36	145.00
IUUC-Afl-008689	Aspergillus flavus	46.22	6.00e-37	147.00
IUUC-Afu-008959	Aspergillus fumigatus	45.74	8.00e-37	146.00
IUUC-Ani-009344	Aspergillus nidulans	43.01	1.00e-23	102.00
IUUC-Ang-009602	Aspergillus niger	44.89	2.00e-35	142.00
IUUC-Aor-009906	Aspergillus oryzae	44.74	9.00e-25	106.00
IUUC-Ate-010267	Aspergillus terreus	44.50	2.00e-30	125.00
IUUC-Ame-011018	Astyanax mexicanus	86.94	8.00e-171	592.00
IUUC-Bgr-012200	Blumeria graminis	49.57	7.00e-47	180.00
IUUC-Bta-013066	Bos taurus	98.06	4.00e-178	616.00
IUUC-Bci-013904	Botrytis cinerea	51.52	2.00e-47	181.00
IUUC-Bdi-014537	Brachypodium distachyon	48.26	1.00e-49	190.00
IUUC-Bol-015474	Brassica oleracea	49.57	1.00e-49	189.00
IUUC-Bra-018039	Brassica rapa	49.57	6.00e-50	191.00
IUUC-Cel-018187	Caenorhabditis elegans	44.03	2.00e-65	242.00
IUUC-Cja-019738	Callithrix jacchus	98.34	0.00e+00	626.00
IUUC-Cfa-020362	Canis familiaris	97.78	6.00e-179	619.00
IUUC-Cpo-021297	Cavia porcellus	97.49	5.00e-174	604.00
IUUC-Cre-022783	Chlamydomonas reinhardtii	49.57	7.00e-45	173.00
IUUC-Cho-024800	Choloepus hoffmanni	97.22	1.00e-56	213.00
IUUC-Cin-025469	Ciona intestinalis	56.09	7.00e-88	317.00
IUUC-Csv-026297	Ciona savignyi	55.46	2.00e-98	352.00
IUUC-Cgl-026657	Colletotrichum gloeosporioides	48.48	3.00e-37	148.00
IUUC-Cne-027027	Cryptococcus neoformans	46.61	2.00e-47	182.00
IUUC-Cme-027212	Cyanidioschyzon merolae	40.07	5.00e-44	171.00
IUUC-Dre-027759	Danio rerio	85.83	8.00e-168	582.00
IUUC-Dno-029528	Dasypus novemcinctus	98.61	0.00e+00	626.00
IUUC-Dor-030255	Dipodomys ordii	97.49	2.00e-177	614.00
IUUC-Dse-031464	Dothistroma septosporum	48.92	8.00e-51	193.00
IUUC-Dme-032000	Drosophila melanogaster	67.58	3.00e-84	305.00
IUUC-Ete-032762	Echinops telfairi	97.51	7.00e-180	622.00
IUUC-Eca-034399	Equus caballus	97.77	0.00e+00	627.00
IUUC-Eeu-035072	Erinaceus europaeus	97.11	9.00e-146	509.00
IUUC-Fca-035993	Felis catus	97.48	3.00e-176	610.00
IUUC-Fal-037623	Ficedula albicollis	64.32	1.00e-119	422.00
IUUC-Fox-037746	Fusarium oxysporum	46.52	3.00e-47	181.00
IUUC-Fso-038431	Fusarium solani	48.70	4.00e-48	184.00
IUUC-Gmo-039290	Gadus morhua	82.45	2.00e-140	491.00
IUUC-Ggr-039821	Gaeumannomyces graminis	48.66	9.00e-40	156.00
IUUC-Gga-040288	Gallus gallus	93.07	1.00e-169	588.00
IUUC-Gac-042587	Gasterosteus aculeatus	85.11	2.00e-162	566.00
IUUC-Gma-044042	Glycine max	51.34	1.00e-54	206.00
IUUC-Ggo-044628	Gorilla gorilla	98.34	0.00e+00	626.00
IUUC-Hsa-045850	Homo sapiens	98.06	0.00e+00	639.00
IUUC-Hvu-047715	Hordeum vulgare	48.26	3.00e-49	188.00
IUUC-Kpa-049158	Komagataella pastoris	53.77	3.00e-53	201.00
IUUC-Lch-050472	Latimeria chalumnae	90.48	2.00e-164	572.00
IUUC-Lpe-051233	Leersia perrieri	47.83	1.00e-46	181.00
IUUC-Loc-052437	Lepisosteus oculatus	76.21	2.00e-90	327.00
IUUC-Lma-053295	Leptosphaeria maculans	52.14	7.00e-46	177.00
IUUC-Laf-053504	Loxodonta africana	98.06	0.00e+00	626.00
IUUC-Mcc-054877	Macaca mulatta	98.34	2.00e-180	624.00
IUUC-Meu-056114	Macropus eugenii	97.23	0.00e+00	635.00
IUUC-Mor-057212	Magnaporthe oryzae	45.89	1.00e-42	166.00
IUUC-Mpo-057587	Magnaporthe poae	49.73	1.00e-40	159.00
IUUC-Mtr-058520	Medicago truncatula	40.10	8.00e-53	200.00
IUUC-Mla-059105	Melampsora laricipopulina	42.11	2.00e-17	82.80
IUUC-Mga-059537	Meleagris gallopavo	91.97	5.00e-175	606.00
IUUC-Mvi-060277	Microbotryum violaceum	36.44	2.00e-37	149.00
IUUC-Mmr-061736	Microcebus murinus	97.51	9.00e-175	605.00
IUUC-Mdo-062403	Monodelphis domestica	96.64	7.00e-179	620.00
IUUC-Mmu-063937	Mus musculus	95.29	2.00e-170	591.00
IUUC-Mac-065456	Musa acuminata	39.85	1.00e-58	219.00
IUUC-Mpu-065901	Mustela putorius furo	98.06	3.00e-179	620.00
IUUC-Mlu-067994	Myotis lucifugus	96.95	0.00e+00	632.00
IUUC-Nfi-068540	Neosartorya fischeri	45.74	1.00e-36	146.00
IUUC-Ncr-068760	Neurospora crassa	49.57	3.00e-51	195.00
IUUC-Nle-069463	Nomascus leucogenys	98.34	0.00e+00	626.00
IUUC-Opr-070298	Ochotona princeps	98.06	2.00e-180	624.00
IUUC-Ont-072615	Oreochromis niloticus	87.19	2.00e-170	591.00
IUUC-Ocu-074141	Oryctolagus cuniculus	97.51	5.00e-180	623.00
IUUC-Oba-075955	Oryza barthii	47.83	4.00e-47	181.00
IUUC-Obr-076545	Oryza brachyantha	47.39	1.00e-45	177.00
IUUC-Ogl-077252	Oryza glaberrima	47.83	5.00e-47	181.00
IUUC-Ogu-078986	Oryza glumaepatula	47.83	5.00e-47	181.00
IUUC-Oin-080166	Oryza indica	47.83	4.00e-47	182.00
IUUC-Olo-080390	Oryza longistaminata	47.83	3.00e-46	180.00
IUUC-Ome-082015	Oryza meridionalis	47.83	3.00e-47	181.00
IUUC-Oni-082397	Oryza nivara	47.83	4.00e-47	181.00
IUUC-Opu-083674	Oryza punctata	47.83	3.00e-47	182.00
IUUC-Oru-085199	Oryza rufipogon	47.83	4.00e-47	181.00
IUUC-Osa-085911	Oryza sativa	47.83	4.00e-47	181.00
IUUC-Ola-087383	Oryzias latipes	86.59	9.00e-167	580.00
IUUC-Olu-087857	Ostreococcus lucimarinus	47.28	1.00e-42	166.00
IUUC-Oga-088882	Otolemur garnettii	96.93	9.00e-178	615.00
IUUC-Oar-089311	Ovis aries	97.78	1.00e-177	615.00
IUUC-Ptr-090931	Pan troglodytes	98.06	0.00e+00	639.00
IUUC-Pan-092286	Papio anubis	98.06	0.00e+00	639.00
IUUC-Psi-093908	Pelodiscus sinensis	92.22	7.00e-168	582.00
IUUC-Pma-094737	Petromyzon marinus	78.20	2.00e-137	481.00
IUUC-Pno-094807	Phaeosphaeria nodorum	51.72	1.00e-51	196.00
IUUC-Ppa-095749	Physcomitrella patens	47.46	2.00e-49	189.00
IUUC-Pfo-097212	Poecilia formosa	85.79	5.00e-168	583.00
IUUC-Pab-097708	Pongo abelii	98.04	0.00e+00	630.00
IUUC-Pop-099138	Populus trichocarpa	42.08	1.00e-60	226.00
IUUC-Pca-100722	Procavia capensis	100.00	2.00e-63	236.00
IUUC-Ppe-101877	Prunus persica	39.85	4.00e-67	248.00
IUUC-Pva-103185	Pteropus vampyrus	97.23	6.00e-179	619.00
IUUC-Pgr-103361	Puccinia graminis	39.57	2.00e-29	123.00
IUUC-Ptt-103848	Puccinia triticina	35.54	6.00e-15	74.30
IUUC-Pte-104114	Pyrenophora teres	50.43	3.00e-49	188.00
IUUC-Pyt-104662	Pyrenophora triticirepentis	50.64	4.00e-50	191.00
IUUC-Rno-104906	Rattus norvegicus	97.51	0.00e+00	637.00
IUUC-Sce-106427	Saccharomyces cerevisiae	47.83	2.00e-52	198.00
IUUC-Sha-106574	Sarcophilus harrisii	95.87	6.00e-179	619.00
IUUC-Sja-107706	Schizosaccharomyces japonicus	47.87	3.00e-46	178.00
IUUC-Spo-108378	Schizosaccharomyces pombe	45.45	2.00e-48	185.00
IUUC-Smo-109639	Selaginella moellendorffii	48.12	4.00e-50	191.00
IUUC-Sit-110284	Setaria italica	50.00	5.00e-47	181.00
IUUC-Sly-111246	Solanum lycopersicum	39.43	6.00e-58	217.00
IUUC-Stu-112695	Solanum tuberosum	39.43	2.00e-58	219.00
IUUC-Sar-113015	Sorex araneus	98.81	5.00e-98	350.00
IUUC-Sbi-114495	Sorghum bicolor	50.00	3.00e-47	182.00
IUUC-Sre-114891	Sporisorium reilianum	53.10	1.00e-55	210.00
IUUC-Ssc-116142	Sus scrofa	98.34	0.00e+00	640.00
IUUC-Tgu-116946	Taeniopygia guttata	90.32	8.00e-128	449.00
IUUC-Tru-118485	Takifugu rubripes	86.24	1.00e-165	577.00
IUUC-Tsy-119004	Tarsius syrichta	95.50	4.00e-148	516.00
IUUC-Tni-120074	Tetraodon nigroviridis	86.91	8.00e-169	585.00
IUUC-Tca-121251	Theobroma cacao	49.36	3.00e-50	192.00
IUUC-Tre-122168	Trichoderma reesei	49.34	1.00e-51	196.00
IUUC-Tvi-122655	Trichoderma virens	48.90	7.00e-48	183.00
IUUC-Tae-124568	Triticum aestivum	48.26	6.00e-49	187.00
IUUC-Tur-126420	Triticum urartu	48.26	6.00e-49	187.00
IUUC-Tme-126937	Tuber melanosporum	53.88	2.00e-53	202.00
IUUC-Tbe-128080	Tupaia belangeri	96.40	4.00e-176	610.00
IUUC-Ttr-128811	Tursiops truncatus	98.34	0.00e+00	626.00
IUUC-Uma-129436	Ustilago maydis	53.54	8.00e-57	213.00
IUUC-Vda-129920	Verticillium dahliae	47.88	5.00e-41	160.00
IUUC-Vpa-130762	Vicugna pacos	100.00	5.00e-62	231.00
IUUC-Vvi-130840	Vitis vinifera	49.35	9.00e-53	200.00
IUUC-Xtr-131967	Xenopus tropicalis	89.71	1.00e-114	405.00
IUUC-Xma-134224	Xiphophorus maculatus	85.24	3.00e-166	577.00
IUUC-Yli-134643	Yarrowia lipolytica	53.28	1.00e-50	192.00
IUUC-Zma-135870	Zea mays	49.57	4.00e-47	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence