iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099219

Ensembl Protein ID

POPTR_0004s20090.1

UniProt Accession

U5GGA5; U5GGA5_POPTR

Genbank Protein ID

ERP62475.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

XM_002328044.1; POPTR_0004s20090g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s20090	POPTR_0004s20090.1	POPTR_0004s20090.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.00e-10	39.9	419	462

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
            C +Cg  g     l++C+ C + +H +C +   +   p+  +w+Cp+C+
   Q: 419  ECRLCGLDGT----LLCCDGCPSSYHSRCIGVV-KMYIPEG-PWYCPECT 462
           5999999999....******************9.*******.6******6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MESMEVKKRG RGRPRKRKPN EEESEEMKSI ANALKKQALD IRWKPLVGRY VLKEFDSGIF 60
LGKIVNYDTG LYRVDYEDGD CEDLESGELR QILLGDDDFD DELFFRRVKL DEFVLQKSEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGACCACC AAAACCTAAA AAGGTAACCT CACTCTCTCC GCAGATGCAA AGACACACAC 60
ACGAGCATCA AATTTATCTT CTAATTCTTG ATTTCTGATT ATTTTTTGGC AGGGATCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018501--DDT_dom
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD
PF15612--WHIM1

SMART

SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0004s20090g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000221	Aegilops tauschii	35.25	0.00e+00	887.00
IUUC-Aml-001431	Ailuropoda melanoleuca	29.17	5.00e-15	78.20
IUUC-Atr-002497	Amborella trichopoda	35.33	0.00e+00	796.00
IUUC-Apl-003251	Anas platyrhynchos	28.57	1.00e-14	76.60
IUUC-Aly-006239	Arabidopsis lyrata	47.71	0.00e+00	873.00
IUUC-Ath-007124	Arabidopsis thaliana	48.39	0.00e+00	871.00
IUUC-Ame-011093	Astyanax mexicanus	29.17	3.00e-13	72.00
IUUC-Bta-012701	Bos taurus	29.17	6.00e-15	77.80
IUUC-Bdi-014067	Brachypodium distachyon	35.28	1.00e-155	544.00
IUUC-Bol-016146	Brassica oleracea	44.54	0.00e+00	837.00
IUUC-Bra-017694	Brassica rapa	47.09	0.00e+00	850.00
IUUC-Cfa-021079	Canis familiaris	29.17	5.00e-15	77.80
IUUC-Csa-023142	Chlorocebus sabaeus	29.17	4.00e-15	78.20
IUUC-Cho-024758	Choloepus hoffmanni	29.17	5.00e-15	77.80
IUUC-Dme-032140	Drosophila melanogaster	29.30	2.00e-14	75.90
IUUC-Ete-032789	Echinops telfairi	28.57	1.00e-13	73.20
IUUC-Eca-033972	Equus caballus	29.17	6.00e-15	77.80
IUUC-Eeu-034541	Erinaceus europaeus	29.17	2.00e-13	72.80
IUUC-Fca-036272	Felis catus	29.17	5.00e-15	77.80
IUUC-Fal-037141	Ficedula albicollis	28.57	2.00e-14	76.30
IUUC-Gga-040833	Gallus gallus	28.57	9.00e-15	77.00
IUUC-Gac-042513	Gasterosteus aculeatus	28.57	8.00e-12	67.00
IUUC-Gma-043978	Glycine max	49.52	0.00e+00	1400.00
IUUC-Hsa-046878	Homo sapiens	29.17	5.00e-15	77.80
IUUC-Hvu-047397	Hordeum vulgare	35.09	0.00e+00	877.00
IUUC-Lch-049744	Latimeria chalumnae	26.83	4.00e-11	65.10
IUUC-Lpe-051272	Leersia perrieri	34.36	2.00e-59	224.00
IUUC-Laf-054223	Loxodonta africana	28.57	1.00e-13	73.60
IUUC-Mcc-054601	Macaca mulatta	29.17	5.00e-15	78.20
IUUC-Mtr-058355	Medicago truncatula	41.30	0.00e+00	665.00
IUUC-Mga-060204	Meleagris gallopavo	28.57	1.00e-14	76.60
IUUC-Mmr-061332	Microcebus murinus	29.17	7.00e-15	77.40
IUUC-Mdo-062245	Monodelphis domestica	29.17	4.00e-15	78.60
IUUC-Mmu-063744	Mus musculus	29.17	2.00e-14	76.30
IUUC-Mac-065252	Musa acuminata	37.95	0.00e+00	1054.00
IUUC-Mpu-066289	Mustela putorius furo	29.17	4.00e-15	78.20
IUUC-Mlu-066991	Myotis lucifugus	29.17	4.00e-15	78.20
IUUC-Nle-070095	Nomascus leucogenys	29.17	4.00e-15	78.60
IUUC-Ont-071778	Oreochromis niloticus	28.22	7.00e-12	67.40
IUUC-Oan-073261	Ornithorhynchus anatinus	28.19	1.00e-11	66.60
IUUC-Ocu-074848	Oryctolagus cuniculus	29.17	5.00e-15	77.80
IUUC-Oba-075125	Oryza barthii	35.37	0.00e+00	914.00
IUUC-Obr-076575	Oryza brachyantha	35.24	8.00e-152	531.00
IUUC-Ogl-077936	Oryza glaberrima	35.37	0.00e+00	914.00
IUUC-Ogu-078676	Oryza glumaepatula	36.00	1.00e-166	581.00
IUUC-Oin-079426	Oryza indica	34.69	9.00e-61	229.00
IUUC-Olo-080881	Oryza longistaminata	25.78	8.00e-67	249.00
IUUC-Ome-081742	Oryza meridionalis	34.69	2.00e-60	228.00
IUUC-Oni-082756	Oryza nivara	34.69	8.00e-61	229.00
IUUC-Opu-083405	Oryza punctata	36.03	9.00e-164	571.00
IUUC-Oru-084745	Oryza rufipogon	35.14	0.00e+00	904.00
IUUC-Ola-086685	Oryzias latipes	30.59	6.00e-12	67.40
IUUC-Oga-088994	Otolemur garnettii	29.17	6.00e-15	77.80
IUUC-Oar-090271	Ovis aries	29.17	6.00e-15	77.80
IUUC-Ptr-090821	Pan troglodytes	29.17	5.00e-15	77.80
IUUC-Psi-093425	Pelodiscus sinensis	27.38	3.00e-13	72.00
IUUC-Pma-094355	Petromyzon marinus	31.18	1.00e-12	70.10
IUUC-Pfo-096995	Poecilia formosa	28.57	6.00e-12	67.80
IUUC-Pab-098056	Pongo abelii	29.17	5.00e-15	77.80
IUUC-Ppe-101582	Prunus persica	29.42	1.00e-72	268.00
IUUC-Pva-103167	Pteropus vampyrus	29.17	9.00e-15	77.00
IUUC-Rno-105749	Rattus norvegicus	27.52	9.00e-11	63.90
IUUC-Sha-106874	Sarcophilus harrisii	29.17	4.00e-15	78.60
IUUC-Smo-108764	Selaginella moellendorffii	29.42	7.00e-75	275.00
IUUC-Sit-109749	Setaria italica	33.11	0.00e+00	769.00
IUUC-Sly-111813	Solanum lycopersicum	43.63	0.00e+00	738.00
IUUC-Sar-113725	Sorex araneus	29.17	1.00e-14	76.60
IUUC-Sbi-113806	Sorghum bicolor	34.59	2.00e-162	566.00
IUUC-Tru-118620	Takifugu rubripes	29.17	2.00e-11	66.20
IUUC-Tni-119746	Tetraodon nigroviridis	29.17	3.00e-13	72.00
IUUC-Tca-121553	Theobroma cacao	54.76	0.00e+00	1736.00
IUUC-Tae-125025	Triticum aestivum	35.17	0.00e+00	892.00
IUUC-Tur-125978	Triticum urartu	33.17	0.00e+00	683.00
IUUC-Tbe-127684	Tupaia belangeri	27.67	1.00e-12	70.10
IUUC-Ttr-128434	Tursiops truncatus	29.17	6.00e-15	77.80
IUUC-Vvi-131129	Vitis vinifera	33.01	2.00e-71	264.00
IUUC-Xtr-132434	Xenopus tropicalis	31.82	1.00e-10	63.20
IUUC-Xma-133765	Xiphophorus maculatus	28.22	1.00e-11	66.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence