iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050304

Ensembl Protein ID

ENSLACP00000022565.1

UniProt Accession

M3XIK9; M3XIK9_LATCH

Genbank Protein ID

ENSLACP00000022565

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01090759

Gene Name

RNF225

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000022217.1	ENSLACT00000025582.1	ENSLACP00000022565.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.90e-08	33.1	12	59

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC++ +++    p+vl+C H+f+++Cl k+ + +++  ke +CP+Cr
   Q: 12   CVICFSQYDNIfklPKVLNCHHIFCLECLAKI-NVNSVREKEVTCPICR 59
           ******9955222277788**********999.77778**********8 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MASEASENEV ECVICFSQYD NIFKLPKVLN CHHIFCLECL AKINVNSVRE KEVTCPICRE 60
VTPLPRGKGL PALDNDSILL SQLPPEMQKA QSIRFSRNKG RLYIKQKPAS KSLLKNVHVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCCG AGGCCAGCGA GAACGAGGTG GAGTGCGTCA TCTGCTTCAG CCAGTACGAC 60
AACATCTTCA AGCTCCCCAA GGTCCTCAAC TGTCACCACA TCTTCTGCCT GGAGTGCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

lcm:102365839

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011609	Astyanax mexicanus	35.42	7.00e-29	120.00
IUUC-Cja-019712	Callithrix jacchus	46.74	4.00e-18	84.70
IUUC-Cfa-020515	Canis familiaris	44.21	3.00e-17	82.40
IUUC-Csa-023296	Chlorocebus sabaeus	46.74	7.00e-18	84.30
IUUC-Dre-028812	Danio rerio	37.19	1.00e-31	130.00
IUUC-Gmo-038633	Gadus morhua	55.10	8.00e-29	117.00
IUUC-Gac-042137	Gasterosteus aculeatus	53.27	1.00e-30	126.00
IUUC-Hsa-046242	Homo sapiens	46.74	5.00e-18	84.70
IUUC-Mmr-061708	Microcebus murinus	43.96	8.00e-17	80.90
IUUC-Mmu-063087	Mus musculus	43.01	5.00e-16	78.20
IUUC-Nle-069438	Nomascus leucogenys	46.74	4.00e-18	85.10
IUUC-Ola-086363	Oryzias latipes	59.34	1.00e-26	112.00
IUUC-Oga-088916	Otolemur garnettii	42.71	8.00e-17	80.90
IUUC-Pfo-097287	Poecilia formosa	35.12	2.00e-32	132.00
IUUC-Pab-098138	Pongo abelii	46.74	6.00e-18	84.30
IUUC-Pte-104093	Pyrenophora teres	31.11	2.00e-06	45.40
IUUC-Rno-105774	Rattus norvegicus	43.01	4.00e-16	78.60
IUUC-Tru-118029	Takifugu rubripes	37.04	8.00e-34	137.00
IUUC-Tni-120086	Tetraodon nigroviridis	44.08	1.00e-32	133.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence