iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-106941

Ensembl Protein ID

ENSSHAP00000008958.1

UniProt Accession

G3W0K3; G3W0K3_SARHA

Genbank Protein ID

ENSSHAP00000008958

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01086827

Gene Name

RRP9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000007762.1	ENSSHAT00000009032.1	ENSSHAP00000008958.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-32	109.2	261	293
UBD/Beta-Prp	4.80e-46	157.4	80	251

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           gH++s+ c+++ ++ +++sGs Dg++ +W l++
   Q: 261  GHQGSIDCIQLiNEEHMISGSEDGSLALWGLSK 293
           8*********9999***************9876 PP

UBD/Beta-Prp

   S: 132  tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...........tgghtdsvyslsfdsngkelvsgsldgtvklwdl 209
           +l+gh+ +++c+v+ pd++ ++sG++D t+  W +++gk l++             g h d v +++++s+gk+l+sg++++ + +wd 
   Q: 80   VLRGHQLSITCLVITPDNSAIFSGAKDCTIIKWGVESGKKLHQIqrvkkgaegqpPG-HADHVLCMAISSDGKYLASGDKNKLILIWDA 167
           899*********************************************999998666.******************************* PP
   S: 210  qtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgse.dskvniwkl 294
            t + ++t++gh+d v+ ++f + ++ l+s+s+D+s+++W++  + ++ tl +h++ v++ ++  +++  +v++++ d++v++wk 
   Q: 168  GTCRHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENAYIETLFGHQDAVTALDG--LSRESCVTAGGrDGTVRVWKI 251
           99999**********************************************************..999999999999*******96 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

RTKEEEDEEL EETAQEKKLR LAKLYLEQLR QQEEEKAEEE AFGNDQVAGR LKEDVLEQRG 60
RLQKLVAKEV QAPVAADIRV LRGHQLSITC LVITPDNSAI FSGAKDCTII KWGVESGKKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGACCAAGG AAGAGGAAGA TGAGGAGCTG GAGGAGACTG CCCAGGAGAA GAAGCTCCGG 60
CTGGCTAAGC TGTACTTGGA GCAGTTGAGG CAGCAAGGTA AGTGACAGAA GCCTGGGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0034511--F:U3 snoRNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	33.77	1.00e-56	213.00
IUUC-Aml-002072	Ailuropoda melanoleuca	83.94	0.00e+00	665.00
IUUC-Atr-002824	Amborella trichopoda	38.11	3.00e-70	259.00
IUUC-Apl-003264	Anas platyrhynchos	72.73	2.00e-158	551.00
IUUC-Aca-004898	Anolis carolinensis	76.90	7.00e-177	613.00
IUUC-Aly-005535	Arabidopsis lyrata	38.50	1.00e-67	250.00
IUUC-Ath-007003	Arabidopsis thaliana	39.30	4.00e-68	252.00
IUUC-Ago-007710	Ashbya gossypii	27.55	1.00e-49	191.00
IUUC-Acl-008345	Aspergillus clavatus	34.07	2.00e-57	217.00
IUUC-Afl-008718	Aspergillus flavus	30.64	3.00e-52	199.00
IUUC-Afu-008966	Aspergillus fumigatus	28.94	1.00e-52	201.00
IUUC-Ani-009214	Aspergillus nidulans	31.70	6.00e-58	218.00
IUUC-Ang-009774	Aspergillus niger	34.57	2.00e-59	223.00
IUUC-Aor-009956	Aspergillus oryzae	30.64	3.00e-52	199.00
IUUC-Ate-010449	Aspergillus terreus	31.44	2.00e-55	209.00
IUUC-Ame-011860	Astyanax mexicanus	70.99	2.00e-166	578.00
IUUC-Bgr-012213	Blumeria graminis	32.65	9.00e-65	241.00
IUUC-Bta-012698	Bos taurus	84.06	0.00e+00	658.00
IUUC-Bci-013973	Botrytis cinerea	30.21	8.00e-61	228.00
IUUC-Bdi-014790	Brachypodium distachyon	36.62	5.00e-64	238.00
IUUC-Bol-016068	Brassica oleracea	38.50	2.00e-68	253.00
IUUC-Bra-017410	Brassica rapa	38.50	3.00e-64	239.00
IUUC-Cel-018616	Caenorhabditis elegans	36.75	1.00e-72	267.00
IUUC-Cja-019532	Callithrix jacchus	83.83	0.00e+00	674.00
IUUC-Cfa-020961	Canis familiaris	79.02	0.00e+00	654.00
IUUC-Cpo-021527	Cavia porcellus	84.83	0.00e+00	665.00
IUUC-Csa-023106	Chlorocebus sabaeus	85.57	0.00e+00	677.00
IUUC-Cin-025670	Ciona intestinalis	52.79	2.00e-123	435.00
IUUC-Csv-026172	Ciona savignyi	51.66	2.00e-115	409.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	34.12	5.00e-66	245.00
IUUC-Cne-027070	Cryptococcus neoformans	29.30	3.00e-43	169.00
IUUC-Cme-027125	Cyanidioschyzon merolae	26.42	6.00e-32	132.00
IUUC-Dre-027919	Danio rerio	68.22	1.00e-157	549.00
IUUC-Dno-029684	Dasypus novemcinctus	85.31	3.00e-151	527.00
IUUC-Dor-030363	Dipodomys ordii	76.35	1.00e-93	336.00
IUUC-Dse-031503	Dothistroma septosporum	32.40	4.00e-60	225.00
IUUC-Dme-031979	Drosophila melanogaster	43.00	5.00e-92	331.00
IUUC-Eca-033735	Equus caballus	85.11	0.00e+00	658.00
IUUC-Fca-036193	Felis catus	84.54	0.00e+00	676.00
IUUC-Fal-037058	Ficedula albicollis	70.82	6.00e-165	573.00
IUUC-Fox-038036	Fusarium oxysporum	32.63	5.00e-62	231.00
IUUC-Fso-038298	Fusarium solani	33.03	6.00e-63	234.00
IUUC-Gmo-038796	Gadus morhua	65.74	7.00e-139	486.00
IUUC-Ggr-040074	Gaeumannomyces graminis	31.57	1.00e-51	197.00
IUUC-Gga-040743	Gallus gallus	74.29	4.00e-131	460.00
IUUC-Gac-042583	Gasterosteus aculeatus	64.32	7.00e-159	553.00
IUUC-Gma-042659	Glycine max	38.29	5.00e-76	278.00
IUUC-Ggo-045543	Gorilla gorilla	85.57	0.00e+00	678.00
IUUC-Hsa-047017	Homo sapiens	85.57	0.00e+00	679.00
IUUC-Hvu-047173	Hordeum vulgare	37.14	3.00e-69	255.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	81.59	0.00e+00	659.00
IUUC-Kpa-049262	Komagataella pastoris	30.16	2.00e-52	199.00
IUUC-Lch-050566	Latimeria chalumnae	72.85	4.00e-153	534.00
IUUC-Lpe-051651	Leersia perrieri	34.92	2.00e-64	239.00
IUUC-Loc-051997	Lepisosteus oculatus	69.81	8.00e-161	560.00
IUUC-Lma-053182	Leptosphaeria maculans	31.38	1.00e-57	217.00
IUUC-Laf-054105	Loxodonta africana	84.52	0.00e+00	657.00
IUUC-Mcc-055215	Macaca mulatta	85.57	0.00e+00	678.00
IUUC-Meu-055943	Macropus eugenii	92.29	0.00e+00	727.00
IUUC-Mor-057069	Magnaporthe oryzae	33.05	2.00e-63	236.00
IUUC-Mpo-057358	Magnaporthe poae	31.44	2.00e-50	193.00
IUUC-Mtr-058209	Medicago truncatula	38.60	1.00e-78	286.00
IUUC-Mla-059043	Melampsora laricipopulina	28.22	4.00e-47	182.00
IUUC-Mga-060024	Meleagris gallopavo	71.39	5.00e-147	513.00
IUUC-Mvi-060371	Microbotryum violaceum	30.45	2.00e-61	230.00
IUUC-Mmr-061403	Microcebus murinus	84.73	0.00e+00	674.00
IUUC-Mdo-063026	Monodelphis domestica	94.68	0.00e+00	739.00
IUUC-Mmu-063646	Mus musculus	83.58	0.00e+00	666.00
IUUC-Mac-065149	Musa acuminata	38.92	6.00e-77	281.00
IUUC-Mpu-065760	Mustela putorius furo	84.79	0.00e+00	682.00
IUUC-Mlu-067963	Myotis lucifugus	85.79	0.00e+00	670.00
IUUC-Nfi-068288	Neosartorya fischeri	33.09	6.00e-56	211.00
IUUC-Ncr-068679	Neurospora crassa	33.91	1.00e-57	217.00
IUUC-Nle-069766	Nomascus leucogenys	78.66	2.00e-175	608.00
IUUC-Opr-070906	Ochotona princeps	84.78	0.00e+00	671.00
IUUC-Ont-071661	Oreochromis niloticus	67.34	2.00e-158	551.00
IUUC-Oan-073465	Ornithorhynchus anatinus	70.05	1.00e-146	512.00
IUUC-Ocu-074263	Oryctolagus cuniculus	85.57	0.00e+00	677.00
IUUC-Oba-075607	Oryza barthii	37.02	4.00e-61	228.00
IUUC-Ogl-077387	Oryza glaberrima	35.98	2.00e-63	236.00
IUUC-Ogu-078323	Oryza glumaepatula	36.80	2.00e-63	236.00
IUUC-Oin-079977	Oryza indica	30.93	1.00e-41	164.00
IUUC-Olo-080857	Oryza longistaminata	36.72	1.00e-63	237.00
IUUC-Ome-081568	Oryza meridionalis	36.46	6.00e-63	234.00
IUUC-Oni-082685	Oryza nivara	36.53	3.00e-66	245.00
IUUC-Opu-084049	Oryza punctata	36.53	2.00e-63	236.00
IUUC-Oru-084348	Oryza rufipogon	36.53	3.00e-66	245.00
IUUC-Osa-086076	Oryza sativa	36.53	3.00e-66	245.00
IUUC-Ola-086991	Oryzias latipes	69.02	1.00e-158	552.00
IUUC-Olu-087891	Ostreococcus lucimarinus	35.77	4.00e-64	238.00
IUUC-Oga-088991	Otolemur garnettii	85.68	0.00e+00	669.00
IUUC-Oar-090430	Ovis aries	83.09	0.00e+00	656.00
IUUC-Ptr-091359	Pan troglodytes	85.82	0.00e+00	681.00
IUUC-Pan-092499	Papio anubis	85.57	0.00e+00	677.00
IUUC-Pma-094447	Petromyzon marinus	60.34	3.00e-122	431.00
IUUC-Pno-095008	Phaeosphaeria nodorum	31.90	1.00e-60	227.00
IUUC-Ppa-095680	Physcomitrella patens	37.80	2.00e-73	270.00
IUUC-Pfo-096430	Poecilia formosa	68.84	9.00e-160	556.00
IUUC-Pab-097649	Pongo abelii	85.57	0.00e+00	677.00
IUUC-Pop-100055	Populus trichocarpa	40.53	7.00e-78	284.00
IUUC-Pca-100317	Procavia capensis	67.44	2.00e-119	422.00
IUUC-Ppe-101999	Prunus persica	39.70	2.00e-78	286.00
IUUC-Pva-103046	Pteropus vampyrus	84.08	0.00e+00	673.00
IUUC-Pgr-103655	Puccinia graminis	29.43	1.00e-49	191.00
IUUC-Ptt-103812	Puccinia triticina	31.46	7.00e-46	178.00
IUUC-Pte-104243	Pyrenophora teres	30.89	4.00e-55	209.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	31.25	3.00e-57	216.00
IUUC-Rno-104973	Rattus norvegicus	83.58	0.00e+00	668.00
IUUC-Sce-106329	Saccharomyces cerevisiae	25.30	8.00e-45	174.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	31.05	3.00e-60	225.00
IUUC-Spo-108329	Schizosaccharomyces pombe	36.34	2.00e-71	263.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	31.54	2.00e-62	233.00
IUUC-Smo-109198	Selaginella moellendorffii	37.24	2.00e-62	232.00
IUUC-Sit-109694	Setaria italica	37.92	2.00e-72	266.00
IUUC-Sly-111294	Solanum lycopersicum	38.60	1.00e-77	283.00
IUUC-Stu-112747	Solanum tuberosum	39.38	3.00e-79	289.00
IUUC-Sar-113315	Sorex araneus	83.57	3.00e-65	242.00
IUUC-Sbi-114694	Sorghum bicolor	36.41	5.00e-71	261.00
IUUC-Sre-114937	Sporisorium reilianum	29.26	3.00e-62	233.00
IUUC-Ssc-116127	Sus scrofa	83.83	0.00e+00	668.00
IUUC-Tgu-117242	Taeniopygia guttata	68.65	4.00e-105	373.00
IUUC-Tru-118285	Takifugu rubripes	67.68	1.00e-163	569.00
IUUC-Tni-120368	Tetraodon nigroviridis	66.92	4.00e-159	554.00
IUUC-Tca-121724	Theobroma cacao	37.82	4.00e-70	258.00
IUUC-Tre-122106	Trichoderma reesei	32.84	6.00e-65	241.00
IUUC-Tvi-122526	Trichoderma virens	32.87	8.00e-66	244.00
IUUC-Tae-125579	Triticum aestivum	36.88	6.00e-68	251.00
IUUC-Tur-126548	Triticum urartu	36.62	1.00e-67	250.00
IUUC-Tme-126985	Tuber melanosporum	34.20	2.00e-63	236.00
IUUC-Tbe-127923	Tupaia belangeri	85.18	0.00e+00	667.00
IUUC-Ttr-129308	Tursiops truncatus	79.19	1.00e-175	608.00
IUUC-Uma-129472	Ustilago maydis	29.55	7.00e-57	215.00
IUUC-Vda-129910	Verticillium dahliae	33.20	5.00e-66	245.00
IUUC-Vvi-131683	Vitis vinifera	38.99	2.00e-83	302.00
IUUC-Xtr-132118	Xenopus tropicalis	68.02	5.00e-157	546.00
IUUC-Xma-133804	Xiphophorus maculatus	67.84	1.00e-157	549.00
IUUC-Yli-134639	Yarrowia lipolytica	30.88	8.00e-57	214.00
IUUC-Zma-135779	Zea mays	37.05	8.00e-67	247.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence