iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027867

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Helicase-like transcription factor

Genbank Nucleotide ID

CR788256

Gene Name

hltf

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000026053.8	ENSDART00000132050.1	ENSDARP00000120933.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-07	32.2	697	738

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+++++ p+++ C Hvf++ C+  +    +s++ +++CPlCr
   Q: 697  CAICLDSLRQ-PVITYCAHVFCRPCICEV---IRSEKEQAKCPLCR 738
           ********88.999************444...599**********8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MQSSSSSTAS SSTPPRYAFI DFMDVGSTMT LSQELANLTE DAGQELEAEG NVLFGSIQGL 60
IVGLRYYTGA VNKGEMVSLV REPHNPYDRN AVMVANVYGS QVGHIKKELA AAMAYIMDNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTCAAAAC ACTCGCGCCA CTCACTGGCG TCACGAAAGC GAGACTTGTA TTCAGAATTA 60
GATAACTGAC CTACAATAAA CCCGTGAACG CAGCGATATT CATCGCCCAT GCAGTATTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR030065--HLTF
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016887--F:ATPase activity
GO:0003676--F:nucleic acid binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006301--P:postreplication repair
GO:0000209--P:protein polyubiquitination
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

KEGG

dre:564651

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	38.83	1.00e-110	394.00
IUUC-Aml-001237	Ailuropoda melanoleuca	60.07	0.00e+00	674.00
IUUC-Atr-003058	Amborella trichopoda	38.05	4.00e-106	379.00
IUUC-Apl-003679	Anas platyrhynchos	29.83	2.00e-66	247.00
IUUC-Aca-004994	Anolis carolinensis	54.81	0.00e+00	984.00
IUUC-Aly-005898	Arabidopsis lyrata	39.56	2.00e-117	417.00
IUUC-Ath-007559	Arabidopsis thaliana	39.04	4.00e-117	416.00
IUUC-Ago-007997	Ashbya gossypii	35.14	5.00e-82	299.00
IUUC-Acl-008022	Aspergillus clavatus	31.94	2.00e-81	297.00
IUUC-Afl-008697	Aspergillus flavus	34.12	3.00e-84	306.00
IUUC-Afu-008767	Aspergillus fumigatus	35.78	1.00e-86	315.00
IUUC-Ani-009435	Aspergillus nidulans	34.62	2.00e-84	307.00
IUUC-Ang-009635	Aspergillus niger	35.78	2.00e-88	320.00
IUUC-Aor-010130	Aspergillus oryzae	35.26	8.00e-88	318.00
IUUC-Ate-010582	Aspergillus terreus	33.92	5.00e-77	282.00
IUUC-Ame-011743	Astyanax mexicanus	66.06	0.00e+00	716.00
IUUC-Bgr-012147	Blumeria graminis	32.93	7.00e-86	312.00
IUUC-Bta-013391	Bos taurus	60.59	0.00e+00	717.00
IUUC-Bci-013741	Botrytis cinerea	34.86	1.00e-90	328.00
IUUC-Bdi-014267	Brachypodium distachyon	40.07	3.00e-119	422.00
IUUC-Bol-016075	Brassica oleracea	40.57	3.00e-119	423.00
IUUC-Bra-017057	Brassica rapa	41.34	1.00e-118	421.00
IUUC-Cja-019685	Callithrix jacchus	60.03	0.00e+00	707.00
IUUC-Cfa-020485	Canis familiaris	60.07	0.00e+00	673.00
IUUC-Cpo-021361	Cavia porcellus	61.99	0.00e+00	681.00
IUUC-Cre-022824	Chlamydomonas reinhardtii	30.11	1.00e-61	232.00
IUUC-Csa-023894	Chlorocebus sabaeus	60.52	0.00e+00	711.00
IUUC-Cho-024891	Choloepus hoffmanni	59.68	7.00e-134	471.00
IUUC-Csv-026168	Ciona savignyi	26.88	1.00e-47	184.00
IUUC-Cgl-026606	Colletotrichum gloeosporioides	34.07	1.00e-91	331.00
IUUC-Cne-026829	Cryptococcus neoformans	36.36	3.00e-91	330.00
IUUC-Cme-027110	Cyanidioschyzon merolae	34.21	7.00e-88	319.00
IUUC-Dno-029517	Dasypus novemcinctus	60.42	0.00e+00	695.00
IUUC-Dor-030590	Dipodomys ordii	63.41	6.00e-108	385.00
IUUC-Dse-031471	Dothistroma septosporum	32.06	1.00e-88	322.00
IUUC-Dme-031815	Drosophila melanogaster	31.25	4.00e-33	137.00
IUUC-Ete-032421	Echinops telfairi	50.70	7.00e-157	548.00
IUUC-Eca-034058	Equus caballus	58.85	0.00e+00	654.00
IUUC-Eeu-034597	Erinaceus europaeus	46.63	1.00e-134	474.00
IUUC-Fca-035390	Felis catus	53.34	0.00e+00	937.00
IUUC-Fal-037486	Ficedula albicollis	30.78	1.00e-61	231.00
IUUC-Fox-038039	Fusarium oxysporum	34.19	5.00e-89	323.00
IUUC-Fso-038179	Fusarium solani	34.87	2.00e-92	334.00
IUUC-Gmo-038544	Gadus morhua	61.89	0.00e+00	729.00
IUUC-Ggr-039735	Gaeumannomyces graminis	32.55	6.00e-79	289.00
IUUC-Gga-040472	Gallus gallus	28.15	6.00e-59	223.00
IUUC-Gac-042401	Gasterosteus aculeatus	62.93	0.00e+00	764.00
IUUC-Gma-042995	Glycine max	38.29	7.00e-108	385.00
IUUC-Ggo-045628	Gorilla gorilla	60.69	0.00e+00	715.00
IUUC-Hsa-045930	Homo sapiens	60.52	0.00e+00	713.00
IUUC-Hvu-047747	Hordeum vulgare	38.37	2.00e-111	397.00
IUUC-Itr-048493	Ictidomys tridecemlineatus	59.62	0.00e+00	696.00
IUUC-Kpa-049087	Komagataella pastoris	33.10	3.00e-81	297.00
IUUC-Lch-050617	Latimeria chalumnae	63.72	0.00e+00	751.00
IUUC-Lpe-051724	Leersia perrieri	39.63	2.00e-118	419.00
IUUC-Loc-052785	Lepisosteus oculatus	68.00	0.00e+00	798.00
IUUC-Lma-052956	Leptosphaeria maculans	32.15	2.00e-85	310.00
IUUC-Laf-054309	Loxodonta africana	59.90	0.00e+00	688.00
IUUC-Mcc-055493	Macaca mulatta	60.10	0.00e+00	709.00
IUUC-Meu-056270	Macropus eugenii	58.85	1.00e-177	617.00
IUUC-Mor-056943	Magnaporthe oryzae	36.97	5.00e-90	326.00
IUUC-Mpo-057407	Magnaporthe poae	32.39	1.00e-84	308.00
IUUC-Mtr-058172	Medicago truncatula	39.15	4.00e-111	395.00
IUUC-Mla-059170	Melampsora laricipopulina	32.18	1.00e-78	288.00
IUUC-Mga-059553	Meleagris gallopavo	29.41	3.00e-64	240.00
IUUC-Mvi-060365	Microbotryum violaceum	35.22	6.00e-94	339.00
IUUC-Mmr-061043	Microcebus murinus	52.08	0.00e+00	925.00
IUUC-Mdo-062919	Monodelphis domestica	53.79	0.00e+00	892.00
IUUC-Mmu-064338	Mus musculus	59.09	0.00e+00	708.00
IUUC-Mac-065666	Musa acuminata	34.96	8.00e-87	315.00
IUUC-Mpu-066781	Mustela putorius furo	59.90	0.00e+00	674.00
IUUC-Mlu-068076	Myotis lucifugus	60.00	0.00e+00	692.00
IUUC-Nfi-068386	Neosartorya fischeri	34.61	5.00e-83	302.00
IUUC-Ncr-068844	Neurospora crassa	35.48	3.00e-91	330.00
IUUC-Nle-069947	Nomascus leucogenys	60.52	0.00e+00	712.00
IUUC-Opr-070388	Ochotona princeps	47.13	4.00e-159	555.00
IUUC-Ont-071782	Oreochromis niloticus	65.11	0.00e+00	736.00
IUUC-Oan-073331	Ornithorhynchus anatinus	49.76	1.00e-47	185.00
IUUC-Ocu-074705	Oryctolagus cuniculus	62.85	0.00e+00	701.00
IUUC-Oba-075881	Oryza barthii	39.96	3.00e-120	426.00
IUUC-Obr-076344	Oryza brachyantha	38.43	1.00e-112	400.00
IUUC-Ogl-076957	Oryza glaberrima	39.96	3.00e-120	426.00
IUUC-Ogu-078648	Oryza glumaepatula	39.02	8.00e-114	404.00
IUUC-Oin-079449	Oryza indica	38.99	1.00e-114	407.00
IUUC-Olo-080721	Oryza longistaminata	38.99	1.00e-114	407.00
IUUC-Ome-081579	Oryza meridionalis	38.81	2.00e-114	406.00
IUUC-Oni-083054	Oryza nivara	38.99	1.00e-114	407.00
IUUC-Opu-083706	Oryza punctata	38.81	1.00e-114	407.00
IUUC-Oru-085259	Oryza rufipogon	38.99	5.00e-115	408.00
IUUC-Osa-085686	Oryza sativa	38.57	6.00e-107	382.00
IUUC-Ola-086830	Oryzias latipes	55.86	0.00e+00	1004.00
IUUC-Olu-087669	Ostreococcus lucimarinus	28.37	5.00e-54	206.00
IUUC-Oga-088120	Otolemur garnettii	62.17	0.00e+00	644.00
IUUC-Oar-089293	Ovis aries	60.42	0.00e+00	715.00
IUUC-Ptr-091418	Pan troglodytes	60.52	0.00e+00	712.00
IUUC-Pan-092579	Papio anubis	60.23	3.00e-119	423.00
IUUC-Psi-093626	Pelodiscus sinensis	60.93	0.00e+00	690.00
IUUC-Pno-094841	Phaeosphaeria nodorum	38.06	2.00e-87	317.00
IUUC-Ppa-095291	Physcomitrella patens	45.35	6.00e-139	488.00
IUUC-Pfo-096540	Poecilia formosa	59.09	0.00e+00	1110.00
IUUC-Pab-098010	Pongo abelii	60.34	0.00e+00	710.00
IUUC-Pop-099320	Populus trichocarpa	38.48	5.00e-108	386.00
IUUC-Pca-100648	Procavia capensis	59.48	0.00e+00	691.00
IUUC-Ppe-102077	Prunus persica	39.66	8.00e-103	368.00
IUUC-Pva-102896	Pteropus vampyrus	57.29	7.00e-166	578.00
IUUC-Pgr-103403	Puccinia graminis	33.57	1.00e-77	285.00
IUUC-Ptt-103966	Puccinia triticina	33.51	1.00e-76	281.00
IUUC-Pte-104242	Pyrenophora teres	32.72	8.00e-85	309.00
IUUC-Pyt-104728	Pyrenophora triticirepentis	32.52	4.00e-86	313.00
IUUC-Rno-106130	Rattus norvegicus	59.20	0.00e+00	702.00
IUUC-Sce-106159	Saccharomyces cerevisiae	32.97	6.00e-81	295.00
IUUC-Sha-107221	Sarcophilus harrisii	53.84	0.00e+00	903.00
IUUC-Sja-107985	Schizosaccharomyces japonicus	34.04	1.00e-86	315.00
IUUC-Spo-108026	Schizosaccharomyces pombe	31.17	2.00e-84	307.00
IUUC-Ssl-108388	Sclerotinia sclerotiorum	34.01	7.00e-89	322.00
IUUC-Smo-109465	Selaginella moellendorffii	41.24	2.00e-116	414.00
IUUC-Sit-109770	Setaria italica	40.33	2.00e-119	423.00
IUUC-Sly-111031	Solanum lycopersicum	38.54	2.00e-112	400.00
IUUC-Stu-112600	Solanum tuberosum	38.54	6.00e-113	402.00
IUUC-Sar-113719	Sorex araneus	60.00	0.00e+00	725.00
IUUC-Sbi-113927	Sorghum bicolor	39.71	3.00e-109	390.00
IUUC-Sre-114938	Sporisorium reilianum	31.18	2.00e-77	284.00
IUUC-Ssc-116186	Sus scrofa	60.24	0.00e+00	709.00
IUUC-Tru-117768	Takifugu rubripes	57.10	0.00e+00	1013.00
IUUC-Tsy-118957	Tarsius syrichta	61.54	0.00e+00	665.00
IUUC-Tni-120618	Tetraodon nigroviridis	62.13	0.00e+00	738.00
IUUC-Tca-121146	Theobroma cacao	37.91	9.00e-111	395.00
IUUC-Tre-121896	Trichoderma reesei	35.16	1.00e-96	348.00
IUUC-Tvi-122597	Trichoderma virens	35.74	1.00e-95	344.00
IUUC-Tae-125897	Triticum aestivum	39.84	5.00e-113	402.00
IUUC-Tur-125999	Triticum urartu	38.37	1.00e-111	397.00
IUUC-Tme-126953	Tuber melanosporum	33.16	3.00e-90	327.00
IUUC-Tbe-127612	Tupaia belangeri	46.90	2.00e-118	421.00
IUUC-Ttr-128243	Tursiops truncatus	60.72	1.00e-117	417.00
IUUC-Uma-129441	Ustilago maydis	30.95	1.00e-77	285.00
IUUC-Vda-129933	Verticillium dahliae	34.83	1.00e-81	298.00
IUUC-Vpa-130672	Vicugna pacos	60.42	0.00e+00	699.00
IUUC-Vvi-131204	Vitis vinifera	40.88	7.00e-123	435.00
IUUC-Xtr-132730	Xenopus tropicalis	50.30	0.00e+00	883.00
IUUC-Xma-133384	Xiphophorus maculatus	58.98	0.00e+00	1098.00
IUUC-Yli-134350	Yarrowia lipolytica	31.29	6.00e-76	279.00
IUUC-Zma-134966	Zea mays	40.45	6.00e-125	441.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence