iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115942

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU311184

Gene Name

TRIM40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000001236.3	ENSSSCT00000033688.1	ENSSSCP00000028552.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.10e-10	40.0	14	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iC+e +k+  ++++CgH+f++ Cl q++   k s+s+  +CPlCr
   Q: 14   CPICQEGLKE-AVSTDCGHLFCRVCLaQHL--GKASASGVLSCPLCR 57
           ********99.999************7777..8889**********8 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MIPLREDSRE EGLCPICQEG LKEAVSTDCG HLFCRVCLAQ HLGKASASGV LSCPLCRKPC 60
SEGVLGAGYT CHSHQKKVCW FCEESRLLLC VECRGSPEHS SHCELAIENA ISHYKERLNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGAACCA TTCCCCAGCT GACCATCCCT TTAGATCCGG AGCCCGAGAA AAAGACCTGA 60
CGTCGTAGCA GGAGAAACCG AGGTAGGATA CCAAGAGAGC TTTTCTGGAA GTGCACTAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000315--Znf_B-box
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008385--C:IkappaB kinase complex
GO:0008270--F:zinc ion binding
GO:0032088--P:negative regulation of NF-kappaB transcription factor activity
GO:0042177--P:negative regulation of protein catabolic process
GO:1900181--P:negative regulation of protein localization to nucleus
GO:0045116--P:protein neddylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001427	Ailuropoda melanoleuca	57.14	2.00e-56	211.00
IUUC-Bta-012543	Bos taurus	65.94	8.00e-75	272.00
IUUC-Cja-018793	Callithrix jacchus	60.31	1.00e-67	249.00
IUUC-Csa-023101	Chlorocebus sabaeus	64.37	4.00e-82	296.00
IUUC-Cho-024926	Choloepus hoffmanni	64.79	7.00e-24	103.00
IUUC-Dno-029338	Dasypus novemcinctus	53.88	8.00e-50	189.00
IUUC-Dor-030164	Dipodomys ordii	59.47	7.00e-62	229.00
IUUC-Dse-031337	Dothistroma septosporum	45.10	9.00e-08	50.80
IUUC-Ete-032446	Echinops telfairi	46.64	3.00e-42	164.00
IUUC-Eca-034042	Equus caballus	73.08	4.00e-88	317.00
IUUC-Eeu-034444	Erinaceus europaeus	56.00	2.00e-64	238.00
IUUC-Ggo-044410	Gorilla gorilla	66.54	2.00e-82	298.00
IUUC-Hsa-046211	Homo sapiens	66.14	2.00e-81	295.00
IUUC-Itr-048126	Ictidomys tridecemlineatus	57.56	1.00e-69	255.00
IUUC-Laf-054019	Loxodonta africana	58.96	2.00e-58	218.00
IUUC-Mcc-054616	Macaca mulatta	70.08	8.00e-95	339.00
IUUC-Meu-055981	Macropus eugenii	41.44	7.00e-38	149.00
IUUC-Mdo-062958	Monodelphis domestica	46.90	8.00e-45	172.00
IUUC-Mmu-063571	Mus musculus	59.07	2.00e-71	261.00
IUUC-Nle-069843	Nomascus leucogenys	56.64	5.00e-27	112.00
IUUC-Opr-071083	Ochotona princeps	55.95	2.00e-71	261.00
IUUC-Ocu-073939	Oryctolagus cuniculus	62.11	5.00e-69	253.00
IUUC-Oga-088040	Otolemur garnettii	66.28	8.00e-81	292.00
IUUC-Oar-089914	Ovis aries	70.51	2.00e-98	352.00
IUUC-Ptr-091240	Pan troglodytes	59.51	9.00e-74	269.00
IUUC-Pan-092095	Papio anubis	70.80	3.00e-86	310.00
IUUC-Pab-098406	Pongo abelii	66.93	7.00e-84	303.00
IUUC-Pca-101043	Procavia capensis	59.83	1.00e-67	249.00
IUUC-Pva-102651	Pteropus vampyrus	69.84	5.00e-96	343.00
IUUC-Rno-106090	Rattus norvegicus	58.40	5.00e-71	260.00
IUUC-Smo-109616	Selaginella moellendorffii	45.10	2.00e-06	45.40
IUUC-Tsy-119497	Tarsius syrichta	65.74	2.00e-82	298.00
IUUC-Tbe-127279	Tupaia belangeri	63.31	4.00e-64	237.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence