iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095531

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544918

Gene Name

PHYPADRAFT_119600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S29_244V6	PP1S29_244V6.1	PP1S29_244V6.1
PP1S29_244V6	PP1S29_244V6.3	PP1S29_244V6.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-35	120.5	405	442
UBD/Beta-Prp	2.20e-57	195.2	327	521

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH   v++++f ++  +l++GsdD+t++vWDlr+  +l
   Q: 405  GHVKAVYGVDFsPNgYHLATGSDDHTCRVWDLRKKQCL 442
           7999********77799***************998886 PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdk 108
             ++f+p++ +l t+s d+t ++wdv+tg  l   +gh+  v+ + f++dg + ++++ D++ +vwdl+tgk + +l+gh + v+ ++fsp+g++
   Q: 327  ARIAFHPSGLYLGTASFDKTWRLWDVSTGIELLLQEGHSRSVYGIAFQQDGALAASCGMDALSRVWDLRTGKSILALEGHVKAVYGVDFSPNGYH 421
           5699**************************99999************************************************************ PP
   S: 109  lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldg 202
           l++Gs+d t rvwdl+++qcl+ +   h+++v+ v+++p++   lv++s D+t r+W+ +  k ++tl g h+++v  ++++ +g +++++s+d+
   Q: 422  LATGSDDHTCRVWDLRKKQCLY-VIPAHNSLVSQVKYDPSDgYFLVTASFDNTSRIWSGRDFKPVKTLAG-HESKVAGIDVSTDGSYIATVSHDR 514
           **********************.******************8999***********************99.************************ PP
   S: 203  tvklwdl 209
           t+klw+ 
   Q: 515  TIKLWSH 521
           *****85 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MADSSLPPGV TLEEDVDMDH PRYPSLGPAP DNGEPSSPDD SPDSPTAEPM ENDEHLYQVS 60
EESQRARERK EQLVQQLLMR RRATALAVPT NDSAVRQRLR HLGHPITLFG EREMERRDRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCAGCTTC GATCGCAACA AAGAGCAGAC CCTCGCCCAG AGCGCAGGGT CGGAGGCGCA 60
TCGTTCAGCT AATGTTGCTG GAGGGCCCAA GCTCGTGGTC CTGTGGCGTT GTTAGGGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

ppp:PHYPADRAFT_119600

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	60.55	1.00e-144	505.00
IUUC-Aml-001737	Ailuropoda melanoleuca	45.36	2.00e-118	418.00
IUUC-Atr-002828	Amborella trichopoda	62.10	2.00e-163	567.00
IUUC-Apl-003723	Anas platyrhynchos	45.81	3.00e-117	414.00
IUUC-Aca-004972	Anolis carolinensis	46.14	7.00e-116	410.00
IUUC-Aly-006531	Arabidopsis lyrata	61.92	1.00e-142	499.00
IUUC-Ath-007367	Arabidopsis thaliana	60.00	1.00e-159	555.00
IUUC-Ago-007893	Ashbya gossypii	33.56	5.00e-56	211.00
IUUC-Acl-008236	Aspergillus clavatus	37.95	3.00e-79	288.00
IUUC-Afl-008522	Aspergillus flavus	39.51	1.00e-86	313.00
IUUC-Afu-008904	Aspergillus fumigatus	38.43	2.00e-86	312.00
IUUC-Ani-009198	Aspergillus nidulans	37.45	7.00e-86	310.00
IUUC-Ang-009662	Aspergillus niger	39.04	2.00e-84	305.00
IUUC-Aor-009881	Aspergillus oryzae	39.51	1.00e-86	312.00
IUUC-Ate-010333	Aspergillus terreus	37.73	1.00e-80	293.00
IUUC-Ame-011697	Astyanax mexicanus	43.04	3.00e-115	407.00
IUUC-Bgr-012254	Blumeria graminis	35.83	2.00e-85	309.00
IUUC-Bta-012615	Bos taurus	45.36	1.00e-118	419.00
IUUC-Bci-013720	Botrytis cinerea	36.40	3.00e-85	308.00
IUUC-Bdi-014302	Brachypodium distachyon	62.28	1.00e-154	538.00
IUUC-Bol-015594	Brassica oleracea	61.94	8.00e-150	523.00
IUUC-Bra-017465	Brassica rapa	61.51	2.00e-149	521.00
IUUC-Cel-018632	Caenorhabditis elegans	38.64	2.00e-81	296.00
IUUC-Cja-019747	Callithrix jacchus	45.36	1.00e-118	419.00
IUUC-Cfa-020288	Canis familiaris	45.36	2.00e-118	419.00
IUUC-Cpo-021440	Cavia porcellus	45.57	2.00e-117	415.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	50.14	2.00e-96	344.00
IUUC-Csa-023139	Chlorocebus sabaeus	50.76	9.00e-101	358.00
IUUC-Cho-024481	Choloepus hoffmanni	44.59	6.00e-117	413.00
IUUC-Cin-025106	Ciona intestinalis	41.48	1.00e-103	369.00
IUUC-Csv-026087	Ciona savignyi	41.92	3.00e-103	368.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	35.50	3.00e-82	299.00
IUUC-Cne-026793	Cryptococcus neoformans	39.85	8.00e-99	353.00
IUUC-Dre-028723	Danio rerio	43.24	5.00e-112	397.00
IUUC-Dno-029299	Dasypus novemcinctus	45.14	4.00e-118	417.00
IUUC-Dse-031562	Dothistroma septosporum	34.07	1.00e-75	276.00
IUUC-Dme-031783	Drosophila melanogaster	40.00	2.00e-87	315.00
IUUC-Ete-032669	Echinops telfairi	45.26	6.00e-119	420.00
IUUC-Eca-033566	Equus caballus	45.36	3.00e-118	418.00
IUUC-Eeu-034524	Erinaceus europaeus	53.19	3.00e-76	278.00
IUUC-Fca-036215	Felis catus	45.36	2.00e-118	418.00
IUUC-Fal-037018	Ficedula albicollis	43.62	8.00e-93	333.00
IUUC-Fox-037936	Fusarium oxysporum	33.33	6.00e-76	277.00
IUUC-Fso-038366	Fusarium solani	35.67	9.00e-83	300.00
IUUC-Gmo-038966	Gadus morhua	44.23	8.00e-88	316.00
IUUC-Ggr-039942	Gaeumannomyces graminis	37.40	1.00e-80	293.00
IUUC-Gga-040797	Gallus gallus	45.47	1.00e-117	416.00
IUUC-Gac-042598	Gasterosteus aculeatus	43.48	2.00e-104	372.00
IUUC-Gma-044220	Glycine max	65.30	4.00e-154	537.00
IUUC-Ggo-044682	Gorilla gorilla	45.36	3.00e-118	418.00
IUUC-Hsa-045804	Homo sapiens	45.36	2.00e-118	418.00
IUUC-Hvu-047567	Hordeum vulgare	58.71	9.00e-132	462.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	45.57	8.00e-119	419.00
IUUC-Kpa-049369	Komagataella pastoris	33.87	5.00e-56	210.00
IUUC-Lch-050074	Latimeria chalumnae	43.30	4.00e-101	361.00
IUUC-Lpe-051333	Leersia perrieri	61.61	2.00e-137	481.00
IUUC-Loc-052164	Lepisosteus oculatus	43.91	1.00e-115	409.00
IUUC-Lma-053088	Leptosphaeria maculans	38.19	1.00e-78	286.00
IUUC-Laf-053460	Loxodonta africana	45.36	2.00e-118	419.00
IUUC-Mcc-055859	Macaca mulatta	45.36	2.00e-118	418.00
IUUC-Meu-056134	Macropus eugenii	46.00	7.00e-120	423.00
IUUC-Mor-057251	Magnaporthe oryzae	36.38	2.00e-79	288.00
IUUC-Mpo-057375	Magnaporthe poae	42.40	2.00e-53	201.00
IUUC-Mtr-057656	Medicago truncatula	64.37	4.00e-135	474.00
IUUC-Mla-059145	Melampsora laricipopulina	42.33	1.00e-94	339.00
IUUC-Mga-059855	Meleagris gallopavo	46.04	1.00e-117	416.00
IUUC-Mvi-060372	Microbotryum violaceum	42.53	2.00e-86	312.00
IUUC-Mmr-060826	Microcebus murinus	45.36	3.00e-118	418.00
IUUC-Mdo-062748	Monodelphis domestica	45.79	2.00e-119	422.00
IUUC-Mmu-063351	Mus musculus	45.36	5.00e-118	417.00
IUUC-Mac-064846	Musa acuminata	61.93	2.00e-142	497.00
IUUC-Mpu-066006	Mustela putorius furo	45.36	2.00e-118	418.00
IUUC-Mlu-067398	Myotis lucifugus	45.36	1.00e-118	419.00
IUUC-Nfi-068399	Neosartorya fischeri	37.97	2.00e-88	318.00
IUUC-Ncr-068711	Neurospora crassa	37.45	1.00e-86	313.00
IUUC-Nle-069982	Nomascus leucogenys	45.36	1.00e-118	419.00
IUUC-Opr-070596	Ochotona princeps	45.57	6.00e-119	420.00
IUUC-Ont-072374	Oreochromis niloticus	46.21	1.00e-109	389.00
IUUC-Oan-073166	Ornithorhynchus anatinus	48.74	7.00e-102	363.00
IUUC-Ocu-074371	Oryctolagus cuniculus	45.57	7.00e-119	420.00
IUUC-Oba-075083	Oryza barthii	61.72	1.00e-149	522.00
IUUC-Obr-076405	Oryza brachyantha	60.40	4.00e-141	493.00
IUUC-Ogl-077683	Oryza glaberrima	61.94	4.00e-149	520.00
IUUC-Ogu-078486	Oryza glumaepatula	61.72	4.00e-148	517.00
IUUC-Oin-079679	Oryza indica	61.72	4.00e-153	534.00
IUUC-Olo-080243	Oryza longistaminata	60.78	5.00e-128	450.00
IUUC-Ome-081230	Oryza meridionalis	61.72	2.00e-153	534.00
IUUC-Oni-082961	Oryza nivara	61.72	3.00e-153	534.00
IUUC-Opu-083189	Oryza punctata	61.51	7.00e-152	529.00
IUUC-Oru-084353	Oryza rufipogon	61.93	4.00e-147	513.00
IUUC-Osa-085458	Oryza sativa	61.72	2.00e-153	534.00
IUUC-Ola-086940	Oryzias latipes	45.43	1.00e-114	405.00
IUUC-Olu-087580	Ostreococcus lucimarinus	41.42	8.00e-74	270.00
IUUC-Oga-088703	Otolemur garnettii	43.29	2.00e-112	399.00
IUUC-Oar-089829	Ovis aries	45.36	3.00e-118	418.00
IUUC-Ptr-090838	Pan troglodytes	45.36	2.00e-118	418.00
IUUC-Pan-092261	Papio anubis	45.26	8.00e-117	413.00
IUUC-Psi-093020	Pelodiscus sinensis	46.36	8.00e-118	416.00
IUUC-Pno-094858	Phaeosphaeria nodorum	37.45	4.00e-79	288.00
IUUC-Pfo-096812	Poecilia formosa	43.81	1.00e-95	342.00
IUUC-Pab-097805	Pongo abelii	49.30	2.00e-99	355.00
IUUC-Pop-100051	Populus trichocarpa	62.72	1.00e-151	528.00
IUUC-Pca-100152	Procavia capensis	45.14	4.00e-118	417.00
IUUC-Ppe-101244	Prunus persica	64.48	4.00e-145	507.00
IUUC-Pva-102529	Pteropus vampyrus	43.20	2.00e-108	385.00
IUUC-Pgr-103550	Puccinia graminis	38.62	1.00e-96	346.00
IUUC-Ptt-103951	Puccinia triticina	49.58	5.00e-68	251.00
IUUC-Pte-104151	Pyrenophora teres	36.50	6.00e-74	270.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	36.29	1.00e-73	270.00
IUUC-Rno-105747	Rattus norvegicus	45.36	8.00e-118	416.00
IUUC-Sce-106418	Saccharomyces cerevisiae	31.99	2.00e-61	229.00
IUUC-Sha-107334	Sarcophilus harrisii	46.00	1.00e-119	422.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	37.39	9.00e-70	256.00
IUUC-Spo-108189	Schizosaccharomyces pombe	39.91	7.00e-86	310.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	36.19	2.00e-83	301.00
IUUC-Smo-108924	Selaginella moellendorffii	62.32	5.00e-161	560.00
IUUC-Sit-110102	Setaria italica	61.91	1.00e-151	528.00
IUUC-Sly-111668	Solanum lycopersicum	63.12	1.00e-148	519.00
IUUC-Stu-111928	Solanum tuberosum	63.12	3.00e-148	517.00
IUUC-Sar-113266	Sorex araneus	39.96	5.00e-100	357.00
IUUC-Sbi-114134	Sorghum bicolor	62.72	3.00e-152	530.00
IUUC-Sre-115114	Sporisorium reilianum	41.20	5.00e-98	350.00
IUUC-Ssc-115443	Sus scrofa	45.36	3.00e-118	418.00
IUUC-Tgu-117157	Taeniopygia guttata	45.15	8.00e-116	409.00
IUUC-Tru-118587	Takifugu rubripes	47.49	7.00e-115	406.00
IUUC-Tsy-119157	Tarsius syrichta	50.14	2.00e-105	375.00
IUUC-Tni-120427	Tetraodon nigroviridis	46.90	1.00e-114	405.00
IUUC-Tca-121368	Theobroma cacao	65.52	6.00e-165	573.00
IUUC-Tre-122074	Trichoderma reesei	34.81	1.00e-82	299.00
IUUC-Tvi-122349	Trichoderma virens	33.94	3.00e-80	291.00
IUUC-Tae-125651	Triticum aestivum	60.94	9.00e-150	522.00
IUUC-Tur-126532	Triticum urartu	59.23	9.00e-130	456.00
IUUC-Tme-126951	Tuber melanosporum	37.80	2.00e-85	309.00
IUUC-Tbe-128136	Tupaia belangeri	41.25	2.00e-101	362.00
IUUC-Ttr-129169	Tursiops truncatus	37.82	2.00e-53	202.00
IUUC-Uma-129399	Ustilago maydis	41.65	1.00e-95	342.00
IUUC-Vda-129842	Verticillium dahliae	34.28	1.00e-80	293.00
IUUC-Vpa-130440	Vicugna pacos	45.36	1.00e-118	419.00
IUUC-Vvi-131075	Vitis vinifera	66.82	2.00e-154	538.00
IUUC-Xma-133002	Xiphophorus maculatus	50.56	3.00e-101	360.00
IUUC-Yli-134569	Yarrowia lipolytica	35.15	5.00e-73	267.00
IUUC-Zma-135799	Zea mays	59.18	4.00e-149	520.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence