iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093936

Ensembl Protein ID

ENSPSIP00000016465.1

UniProt Accession

K7G854; K7G854_PELSI

Genbank Protein ID

ENSPSIP00000016465

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01172840

Gene Name

RLIM

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000014679.1	ENSPSIT00000016541.1	ENSPSIP00000016465.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-07	30.7	543	584

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++ +g  ++ lpC H +h +C+ +w       s + +CP+Cr
   Q: 543  CSVCITEYTEGnkLRKLPCSHEYHVHCIDRW------LSENSTCPICR 584
           9*******5554499****************......**********8 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MESSDSNDKG TIDHSEAQRR SQLDRLEREE AFYHFVNNLN EEDYRLMRDN NLLGTPGEIT 60
EEELMRRLHQ VKEGPPQQNG DENRGAEATE DVSNRDSIID WLNSVRQTGN TTRSGQRGNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNGAGCTG 60
CAGGCAGAGG CACGAGGGCC GGGGGCTGGC GGTGACACGG CGCCACGGGC TCCTCAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043433--P:negative regulation of sequence-specific DNA binding transcription factor activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0060816--P:random inactivation of X chromosome
GO:1900095--P:regulation of dosage compensation by inactivation of X chromosome
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001407	Ailuropoda melanoleuca	75.06	4.00e-142	498.00
IUUC-Atr-002539	Amborella trichopoda	44.26	1.00e-14	73.90
IUUC-Apl-003969	Anas platyrhynchos	87.09	0.00e+00	894.00
IUUC-Aca-005377	Anolis carolinensis	78.69	4.00e-150	524.00
IUUC-Ame-011097	Astyanax mexicanus	58.15	1.00e-102	367.00
IUUC-Bta-013113	Bos taurus	74.59	1.00e-147	516.00
IUUC-Bdi-014392	Brachypodium distachyon	47.06	6.00e-14	70.90
IUUC-Bol-015085	Brassica oleracea	43.01	7.00e-16	77.80
IUUC-Bra-017624	Brassica rapa	43.01	7.00e-16	77.80
IUUC-Cja-018860	Callithrix jacchus	73.30	1.00e-141	496.00
IUUC-Cfa-020358	Canis familiaris	73.11	2.00e-141	496.00
IUUC-Cpo-021533	Cavia porcellus	73.87	5.00e-128	450.00
IUUC-Cre-022755	Chlamydomonas reinhardtii	44.68	9.00e-14	67.40
IUUC-Csa-023242	Chlorocebus sabaeus	71.46	2.00e-135	475.00
IUUC-Cho-024536	Choloepus hoffmanni	65.19	2.00e-114	405.00
IUUC-Cne-026941	Cryptococcus neoformans	36.14	4.00e-12	66.20
IUUC-Dre-027894	Danio rerio	55.95	4.00e-154	537.00
IUUC-Dno-029606	Dasypus novemcinctus	73.98	3.00e-152	531.00
IUUC-Dor-031042	Dipodomys ordii	68.31	4.00e-132	464.00
IUUC-Ete-033099	Echinops telfairi	69.56	0.00e+00	665.00
IUUC-Eca-033976	Equus caballus	73.30	1.00e-151	529.00
IUUC-Eeu-034964	Erinaceus europaeus	66.83	4.00e-170	590.00
IUUC-Fca-035662	Felis catus	75.06	4.00e-142	498.00
IUUC-Fal-036996	Ficedula albicollis	82.81	0.00e+00	806.00
IUUC-Gga-040816	Gallus gallus	87.29	0.00e+00	881.00
IUUC-Gac-041767	Gasterosteus aculeatus	60.00	7.00e-94	337.00
IUUC-Gma-043292	Glycine max	47.37	7.00e-16	78.20
IUUC-Ggo-044754	Gorilla gorilla	73.26	3.00e-148	518.00
IUUC-Hsa-045776	Homo sapiens	73.26	3.00e-148	518.00
IUUC-Hvu-047745	Hordeum vulgare	52.94	1.00e-14	74.30
IUUC-Itr-048044	Ictidomys tridecemlineatus	73.02	9.00e-150	523.00
IUUC-Lch-050178	Latimeria chalumnae	69.39	0.00e+00	634.00
IUUC-Lpe-051680	Leersia perrieri	56.25	2.00e-14	73.20
IUUC-Loc-052124	Lepisosteus oculatus	59.94	3.00e-149	521.00
IUUC-Laf-054328	Loxodonta africana	74.89	9.00e-149	520.00
IUUC-Mcc-054739	Macaca mulatta	73.26	1.00e-148	520.00
IUUC-Meu-056359	Macropus eugenii	74.96	0.00e+00	731.00
IUUC-Mtr-058167	Medicago truncatula	47.37	5.00e-15	75.10
IUUC-Mga-059838	Meleagris gallopavo	87.29	0.00e+00	893.00
IUUC-Mmr-060608	Microcebus murinus	74.44	8.00e-143	500.00
IUUC-Mdo-061961	Monodelphis domestica	77.28	7.00e-148	517.00
IUUC-Mmu-064278	Mus musculus	69.34	4.00e-126	444.00
IUUC-Mac-064703	Musa acuminata	44.44	3.00e-14	72.40
IUUC-Mpu-066539	Mustela putorius furo	66.24	5.00e-111	394.00
IUUC-Mlu-066930	Myotis lucifugus	74.76	2.00e-153	535.00
IUUC-Nle-069311	Nomascus leucogenys	73.03	5.00e-148	517.00
IUUC-Opr-071124	Ochotona princeps	72.02	1.00e-58	220.00
IUUC-Ont-071511	Oreochromis niloticus	60.17	3.00e-93	335.00
IUUC-Oan-073036	Ornithorhynchus anatinus	76.58	3.00e-146	511.00
IUUC-Ocu-073795	Oryctolagus cuniculus	72.93	0.00e+00	697.00
IUUC-Oba-075403	Oryza barthii	56.25	2.00e-14	73.60
IUUC-Obr-076503	Oryza brachyantha	56.25	3.00e-14	72.80
IUUC-Ogl-077574	Oryza glaberrima	56.25	2.00e-14	73.60
IUUC-Ogu-077986	Oryza glumaepatula	56.25	2.00e-14	73.60
IUUC-Oin-079091	Oryza indica	56.25	2.00e-14	73.60
IUUC-Ome-081627	Oryza meridionalis	56.25	2.00e-14	73.20
IUUC-Oni-082260	Oryza nivara	56.25	2.00e-14	73.20
IUUC-Opu-083578	Oryza punctata	56.25	2.00e-14	73.60
IUUC-Oru-084794	Oryza rufipogon	56.25	2.00e-14	73.60
IUUC-Osa-085348	Oryza sativa	56.25	2.00e-14	73.60
IUUC-Ola-087461	Oryzias latipes	59.66	2.00e-86	313.00
IUUC-Olu-087781	Ostreococcus lucimarinus	40.58	7.00e-13	66.20
IUUC-Oga-088022	Otolemur garnettii	73.62	0.00e+00	727.00
IUUC-Oar-089348	Ovis aries	74.82	4.00e-148	518.00
IUUC-Ptr-090604	Pan troglodytes	73.03	1.00e-148	519.00
IUUC-Pan-092322	Papio anubis	73.26	1.00e-148	520.00
IUUC-Ppa-095197	Physcomitrella patens	46.58	4.00e-16	79.30
IUUC-Pab-098671	Pongo abelii	73.03	7.00e-148	517.00
IUUC-Pop-099808	Populus trichocarpa	45.95	2.00e-15	76.30
IUUC-Pca-100263	Procavia capensis	72.27	0.00e+00	691.00
IUUC-Pva-102709	Pteropus vampyrus	74.21	2.00e-137	482.00
IUUC-Ptt-103976	Puccinia triticina	43.75	1.00e-10	59.30
IUUC-Rno-105759	Rattus norvegicus	69.02	0.00e+00	640.00
IUUC-Sha-106792	Sarcophilus harrisii	74.53	2.00e-128	452.00
IUUC-Sit-109852	Setaria italica	56.25	2.00e-14	73.60
IUUC-Sly-111747	Solanum lycopersicum	62.86	2.00e-12	67.00
IUUC-Stu-112633	Solanum tuberosum	62.86	2.00e-12	66.60
IUUC-Sar-113271	Sorex araneus	69.37	3.00e-132	465.00
IUUC-Sbi-114435	Sorghum bicolor	56.25	2.00e-14	73.60
IUUC-Ssc-115738	Sus scrofa	75.76	2.00e-150	525.00
IUUC-Tgu-117205	Taeniopygia guttata	86.29	0.00e+00	858.00
IUUC-Tru-118123	Takifugu rubripes	87.62	1.00e-54	207.00
IUUC-Tsy-119421	Tarsius syrichta	74.16	9.00e-154	536.00
IUUC-Tni-120299	Tetraodon nigroviridis	64.60	2.00e-83	303.00
IUUC-Tca-121367	Theobroma cacao	47.37	8.00e-16	77.80
IUUC-Tae-123264	Triticum aestivum	35.29	4.00e-15	75.50
IUUC-Tur-126084	Triticum urartu	48.89	2.00e-13	72.00
IUUC-Tbe-127543	Tupaia belangeri	73.86	0.00e+00	763.00
IUUC-Vpa-130058	Vicugna pacos	75.53	3.00e-142	498.00
IUUC-Vvi-131093	Vitis vinifera	47.37	6.00e-16	78.20
IUUC-Xtr-132663	Xenopus tropicalis	62.77	4.00e-158	551.00
IUUC-Xma-133076	Xiphophorus maculatus	60.52	1.00e-92	333.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence