iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-004065

Ensembl Protein ID

ENSAPLP00000003000.1

UniProt Accession

U3I6X9; U3I6X9_ANAPL

Genbank Protein ID

ENSAPLP00000003000

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01134478

Gene Name

UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000003494.1	ENSAPLT00000003594.1	ENSAPLP00000003000.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	92.75	4.00e-141	498.00	IUUC-Hsa-046680
UBD/Other/Other	92.75	4.00e-141	498.00	IUUC-Hsa-046680
UBD/Other/Other	39.32	1.00e-46	181.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

VIMPPSALDQ LSRLNITYPM LFKLTNKNSD RMTHCGVLEF VADEGICYLP HWMMQNLLLE 60
EGGLVQVESV NLQVATYSKF QPQSPDFLDI TNPKAVLENA LRNFACLTTG DVIAINYNEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAATTATGC CACCTTCTGC TCTGGATCAA CTCAGTAAGT GAATATTTTG TTCTGGAATA 60
ACGCTGTTAG AAATATGAGT AAAAGCATAA GCAAATACCA CAGTTGTTTA GTTACCTATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	53.89	1.00e-60	226.00
IUUC-Aml-001398	Ailuropoda melanoleuca	92.75	2.00e-142	497.00
IUUC-Atr-002449	Amborella trichopoda	49.76	3.00e-55	207.00
IUUC-Aca-004973	Anolis carolinensis	91.60	1.00e-143	501.00
IUUC-Aly-005501	Arabidopsis lyrata	53.40	5.00e-61	227.00
IUUC-Ath-007324	Arabidopsis thaliana	54.68	9.00e-63	233.00
IUUC-Ago-007918	Ashbya gossypii	38.81	6.00e-49	187.00
IUUC-Acl-008362	Aspergillus clavatus	41.69	1.00e-58	219.00
IUUC-Afl-008690	Aspergillus flavus	60.00	2.00e-55	208.00
IUUC-Afu-008787	Aspergillus fumigatus	42.30	5.00e-57	214.00
IUUC-Ani-009385	Aspergillus nidulans	58.12	5.00e-54	204.00
IUUC-Ang-009709	Aspergillus niger	60.00	3.00e-55	208.00
IUUC-Aor-010240	Aspergillus oryzae	60.00	2.00e-55	208.00
IUUC-Ate-010551	Aspergillus terreus	60.49	8.00e-56	210.00
IUUC-Ame-011417	Astyanax mexicanus	87.45	3.00e-131	460.00
IUUC-Bgr-011986	Blumeria graminis	57.23	2.00e-52	199.00
IUUC-Bta-012559	Bos taurus	92.86	7.00e-96	342.00
IUUC-Bci-013767	Botrytis cinerea	57.76	9.00e-51	193.00
IUUC-Bdi-014336	Brachypodium distachyon	55.10	1.00e-60	226.00
IUUC-Bol-015824	Brassica oleracea	47.10	5.00e-62	230.00
IUUC-Bra-016732	Brassica rapa	46.74	6.00e-62	230.00
IUUC-Cel-018590	Caenorhabditis elegans	39.52	8.00e-48	183.00
IUUC-Cja-019487	Callithrix jacchus	93.51	5.00e-143	499.00
IUUC-Cfa-020497	Canis familiaris	93.13	8.00e-143	499.00
IUUC-Cpo-022150	Cavia porcellus	92.75	2.00e-142	497.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	51.98	1.00e-54	205.00
IUUC-Csa-023602	Chlorocebus sabaeus	92.75	3.00e-142	497.00
IUUC-Cin-025594	Ciona intestinalis	58.58	8.00e-86	309.00
IUUC-Csv-026040	Ciona savignyi	57.46	6.00e-87	313.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	44.44	1.00e-46	180.00
IUUC-Cne-026990	Cryptococcus neoformans	45.22	6.00e-35	141.00
IUUC-Cme-027323	Cyanidioschyzon merolae	46.98	6.00e-40	157.00
IUUC-Dre-027987	Danio rerio	86.31	2.00e-129	454.00
IUUC-Dor-030294	Dipodomys ordii	91.60	5.00e-140	489.00
IUUC-Dse-031411	Dothistroma septosporum	36.86	4.00e-50	191.00
IUUC-Dme-031798	Drosophila melanogaster	55.72	9.00e-82	296.00
IUUC-Ete-032432	Echinops telfairi	92.37	2.00e-141	494.00
IUUC-Eca-034427	Equus caballus	92.75	3.00e-142	497.00
IUUC-Eeu-034917	Erinaceus europaeus	63.74	4.00e-81	294.00
IUUC-Fca-035380	Felis catus	93.13	8.00e-143	499.00
IUUC-Fal-037659	Ficedula albicollis	97.33	8.00e-148	515.00
IUUC-Fox-038062	Fusarium oxysporum	51.79	3.00e-15	74.30
IUUC-Fso-038111	Fusarium solani	34.67	5.00e-46	177.00
IUUC-Gmo-039298	Gadus morhua	84.53	1.00e-121	429.00
IUUC-Ggr-039771	Gaeumannomyces graminis	53.75	2.00e-49	189.00
IUUC-Gga-040313	Gallus gallus	98.09	1.00e-148	518.00
IUUC-Gac-042009	Gasterosteus aculeatus	83.40	1.00e-121	429.00
IUUC-Gma-043844	Glycine max	49.58	3.00e-61	228.00
IUUC-Ggo-044639	Gorilla gorilla	81.54	4.00e-137	480.00
IUUC-Hsa-046680	Homo sapiens	92.75	3.00e-142	497.00
IUUC-Hvu-047614	Hordeum vulgare	53.89	1.00e-60	226.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	92.75	2.00e-142	497.00
IUUC-Kpa-049136	Komagataella pastoris	35.82	4.00e-49	188.00
IUUC-Lch-050607	Latimeria chalumnae	88.17	4.00e-134	470.00
IUUC-Lpe-050726	Leersia perrieri	51.58	4.00e-56	211.00
IUUC-Loc-051848	Lepisosteus oculatus	86.74	5.00e-132	462.00
IUUC-Lma-053187	Leptosphaeria maculans	42.19	2.00e-57	216.00
IUUC-Laf-053569	Loxodonta africana	91.32	1.00e-139	488.00
IUUC-Mcc-055275	Macaca mulatta	92.37	2.00e-141	494.00
IUUC-Mor-056967	Magnaporthe oryzae	37.13	7.00e-51	194.00
IUUC-Mpo-057399	Magnaporthe poae	54.38	5.00e-50	191.00
IUUC-Mtr-058353	Medicago truncatula	52.71	2.00e-60	225.00
IUUC-Mla-058830	Melampsora laricipopulina	45.28	9.00e-38	150.00
IUUC-Mga-059803	Meleagris gallopavo	98.85	9.00e-150	521.00
IUUC-Mvi-060456	Microbotryum violaceum	48.73	4.00e-41	162.00
IUUC-Mmr-060573	Microcebus murinus	92.37	1.00e-141	495.00
IUUC-Mdo-062831	Monodelphis domestica	93.89	7.00e-144	502.00
IUUC-Mmu-064302	Mus musculus	93.51	3.00e-142	497.00
IUUC-Mac-065200	Musa acuminata	53.30	5.00e-60	224.00
IUUC-Mpu-065922	Mustela putorius furo	92.37	4.00e-142	496.00
IUUC-Mlu-068236	Myotis lucifugus	91.32	2.00e-140	491.00
IUUC-Nfi-068417	Neosartorya fischeri	42.30	5.00e-57	214.00
IUUC-Ncr-068747	Neurospora crassa	49.40	2.00e-48	185.00
IUUC-Nle-069948	Nomascus leucogenys	81.27	2.00e-137	481.00
IUUC-Opr-070919	Ochotona princeps	76.17	2.00e-106	378.00
IUUC-Ont-071467	Oreochromis niloticus	86.79	3.00e-129	454.00
IUUC-Oan-073436	Ornithorhynchus anatinus	66.94	4.00e-41	159.00
IUUC-Ocu-074427	Oryctolagus cuniculus	93.13	9.00e-136	475.00
IUUC-Oba-075440	Oryza barthii	53.40	2.00e-61	229.00
IUUC-Obr-076275	Oryza brachyantha	52.63	3.00e-55	207.00
IUUC-Ogl-077237	Oryza glaberrima	53.40	1.00e-61	229.00
IUUC-Ogu-078934	Oryza glumaepatula	53.40	1.00e-61	229.00
IUUC-Oin-079475	Oryza indica	54.81	8.00e-62	229.00
IUUC-Olo-080285	Oryza longistaminata	60.62	9.00e-56	209.00
IUUC-Ome-081887	Oryza meridionalis	54.85	2.00e-61	229.00
IUUC-Oni-082064	Oryza nivara	53.88	7.00e-62	230.00
IUUC-Opu-083610	Oryza punctata	52.91	2.00e-61	228.00
IUUC-Oru-084911	Oryza rufipogon	45.07	3.00e-62	231.00
IUUC-Osa-085366	Oryza sativa	53.40	2.00e-61	229.00
IUUC-Ola-086846	Oryzias latipes	73.27	1.00e-115	409.00
IUUC-Olu-087879	Ostreococcus lucimarinus	46.19	8.00e-52	197.00
IUUC-Oga-089017	Otolemur garnettii	91.70	2.00e-140	491.00
IUUC-Oar-089970	Ovis aries	89.69	3.00e-135	474.00
IUUC-Ptr-091147	Pan troglodytes	83.33	3.00e-129	454.00
IUUC-Pan-091757	Papio anubis	84.47	1.00e-124	439.00
IUUC-Psi-093931	Pelodiscus sinensis	97.33	2.00e-147	514.00
IUUC-Pno-094775	Phaeosphaeria nodorum	53.22	1.00e-51	196.00
IUUC-Ppa-095156	Physcomitrella patens	53.30	4.00e-58	217.00
IUUC-Pfo-097295	Poecilia formosa	84.91	6.00e-128	449.00
IUUC-Pab-098537	Pongo abelii	92.75	3.00e-142	497.00
IUUC-Pop-099436	Populus trichocarpa	51.67	2.00e-60	225.00
IUUC-Pca-100631	Procavia capensis	79.00	3.00e-130	457.00
IUUC-Ppe-101259	Prunus persica	52.68	1.00e-61	229.00
IUUC-Pva-102679	Pteropus vampyrus	82.64	6.00e-123	433.00
IUUC-Pgr-103475	Puccinia graminis	48.75	6.00e-40	157.00
IUUC-Ptt-104012	Puccinia triticina	40.00	4.00e-27	115.00
IUUC-Pte-104071	Pyrenophora teres	57.06	4.00e-54	204.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	57.06	4.00e-54	204.00
IUUC-Rno-104858	Rattus norvegicus	92.75	5.00e-142	496.00
IUUC-Sce-106174	Saccharomyces cerevisiae	39.86	3.00e-49	188.00
IUUC-Sha-107075	Sarcophilus harrisii	94.66	3.00e-145	507.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	43.22	4.00e-53	201.00
IUUC-Spo-108259	Schizosaccharomyces pombe	45.15	7.00e-46	177.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	39.23	1.00e-50	192.00
IUUC-Smo-109290	Selaginella moellendorffii	56.93	1.00e-60	226.00
IUUC-Sit-109992	Setaria italica	53.40	1.00e-60	226.00
IUUC-Sly-110858	Solanum lycopersicum	54.08	2.00e-59	222.00
IUUC-Stu-112028	Solanum tuberosum	59.09	6.00e-54	203.00
IUUC-Sar-113061	Sorex araneus	91.98	6.00e-141	492.00
IUUC-Sbi-114882	Sorghum bicolor	45.26	2.00e-61	228.00
IUUC-Sre-115104	Sporisorium reilianum	49.04	2.00e-39	155.00
IUUC-Ssc-115403	Sus scrofa	92.75	5.00e-142	496.00
IUUC-Tgu-117013	Taeniopygia guttata	98.85	8.00e-150	522.00
IUUC-Tru-118307	Takifugu rubripes	85.98	4.00e-124	437.00
IUUC-Tsy-119309	Tarsius syrichta	79.58	7.00e-63	233.00
IUUC-Tni-120209	Tetraodon nigroviridis	85.98	2.00e-123	434.00
IUUC-Tca-121421	Theobroma cacao	53.20	5.00e-62	230.00
IUUC-Tre-122235	Trichoderma reesei	47.53	3.00e-46	178.00
IUUC-Tvi-122421	Trichoderma virens	48.15	3.00e-46	178.00
IUUC-Tae-124587	Triticum aestivum	53.89	5.00e-61	227.00
IUUC-Tur-126353	Triticum urartu	34.95	3.00e-24	106.00
IUUC-Tme-126918	Tuber melanosporum	57.32	9.00e-54	203.00
IUUC-Ttr-129286	Tursiops truncatus	82.88	3.00e-128	451.00
IUUC-Uma-129404	Ustilago maydis	50.32	1.00e-40	159.00
IUUC-Vda-129746	Verticillium dahliae	48.24	1.00e-46	179.00
IUUC-Vpa-130648	Vicugna pacos	63.74	5.00e-24	104.00
IUUC-Vvi-131301	Vitis vinifera	52.71	9.00e-60	223.00
IUUC-Xtr-132583	Xenopus tropicalis	89.31	8.00e-136	475.00
IUUC-Xma-133129	Xiphophorus maculatus	85.28	5.00e-128	449.00
IUUC-Yli-134515	Yarrowia lipolytica	47.17	2.00e-43	169.00
IUUC-Zma-135266	Zea mays	44.44	9.00e-61	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence