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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Sce-106377
Ensembl Protein ID YLR421C
UniProt Accession O13563; D6VZ57; RPN13_YEAST
Genbank Protein ID AAB67511.1; AAS56647.1; DAA09723.1
Protein Name 26S proteasome regulatory subunit RPN13; Proteasome non-ATPase subunit 13
Genbank Nucleotide ID U20939; AY558321; BK006945
Gene Name RPN13; DAQ1; YLR421C
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
YLR421C YLR421C YLR421C
Annotation
mRNA Expression
GEOFFGED
Protein-protein Interaction
IIDiRefIndexHINT
Protein 3D Structure
PDBMMDB
Post-translational Modifications (PTMs)
CPLMdbPAFdbPTMUniProt
PHOSIDABioGRID
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
UBD/PRU UBD/PRU 18497817; 23153250
Organism Saccharomyces cerevisiae
Functional Description
(View)

Functional Description


     Component of the 19S cap proteasome complex which acts as a regulatory subunit of the 26S proteasome, involved in the ATP-dependent degradation of ubiquitinated proteins.
 Component of the 19S cap proteasome complex which acts as a regulatory subunit of the 26S proteasome, involved in the ATP-dependent degradation of ubiquitinated proteins.
Protein Sequence
(Fasta)
MSMSSTVIKF RAGVCEYNED SRLCTPIPVQ GEIEIKPNEE EELGFWDFEW RPTEKPVGRE 60
LDPISLILIP GETMWVPIKS SKSGRIFALV FSSNERYFFW LQEKNSGNLP LNELSAKDKE 120
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Protein Fasta Sequence


>IUUC-Sce-106377|UBD,PRU|Saccharomyces cerevisiae
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Nucleotide Sequence
(Fasta)
ATGAGTATGA GTTCAACTGT AATTAAATTC AGGGCTGGTG TTTGTGAATA CAACGAAGAT 60
TCACGTCTAT GTACGCCAAT TCCAGTTCAG GGTGAAATCG AGATCAAACC AAATGAAGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sce-106377|UBD,PRU|Saccharomyces cerevisiae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0007--Acetylation
KW-0024--Alternative initiation
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-0647--Proteasome
KW-1185--Reference proteome
Interpro

IPR006773--26S_Psome_Ubiquitin-recp_Rpn13
Pfam

PF04683--Proteasom_Rpn13
Gene Ontology

GO:0005634--C:nucleus
GO:0008541--C:proteasome regulatory particle, lid subcomplex
GO:0034515--C:proteasome storage granule
GO:0061133--F:endopeptidase activator activity
GO:0070628--F:proteasome binding
GO:0043130--F:ubiquitin binding
GO:0006511--P:ubiquitin-dependent protein catabolic process
KEGG sce:YLR421C
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000735 Aegilops tauschii 39.02 4.00e-03 33.10
IUUC-Aml-002306 Ailuropoda melanoleuca 26.53 2.00e-03 35.00
IUUC-Atr-002494 Amborella trichopoda 28.97 3.00e-04 37.40
IUUC-Apl-003608 Anas platyrhynchos 33.33 1.20e-02 32.00
IUUC-Aca-004810 Anolis carolinensis 26.42 6.00e-04 36.60
IUUC-Aly-006501 Arabidopsis lyrata 28.43 7.00e-04 35.80
IUUC-Ath-007220 Arabidopsis thaliana 27.45 1.00e-03 34.70
IUUC-Ago-007904 Ashbya gossypii 50.00 3.00e-32 128.00
IUUC-Acl-008240 Aspergillus clavatus 34.78 4.00e-10 57.00
IUUC-Afl-008673 Aspergillus flavus 34.55 2.00e-10 57.80
IUUC-Afu-009026 Aspergillus fumigatus 38.64 7.00e-04 35.80
IUUC-Ani-009170 Aspergillus nidulans 33.02 1.00e-09 55.50
IUUC-Ang-009696 Aspergillus niger 35.19 2.00e-10 57.80
IUUC-Aor-009975 Aspergillus oryzae 34.55 2.00e-10 57.80
IUUC-Ate-010404 Aspergillus terreus 31.48 1.00e-09 55.50
IUUC-Ame-011726 Astyanax mexicanus 24.49 3.00e-03 34.30
IUUC-Bgr-012116 Blumeria graminis 29.84 1.00e-08 52.40
IUUC-Bta-012876 Bos taurus 31.34 1.00e-03 34.30
IUUC-Bdi-014600 Brachypodium distachyon 30.48 4.00e-04 36.60
IUUC-Bol-015418 Brassica oleracea 30.00 3.00e-03 34.30
IUUC-Bra-018022 Brassica rapa 29.81 8.00e-04 35.80
IUUC-Cja-019223 Callithrix jacchus 26.73 5.00e-04 37.00
IUUC-Cfa-020839 Canis familiaris 32.35 4.00e-04 34.70
IUUC-Cpo-021820 Cavia porcellus 26.53 2.00e-03 35.00
IUUC-Csa-023622 Chlorocebus sabaeus 26.53 2.00e-03 35.00
IUUC-Cin-025475 Ciona intestinalis 28.16 1.00e-04 38.90
IUUC-Csv-026094 Ciona savignyi 27.84 9.00e-05 38.90
IUUC-Cgl-026557 Colletotrichum gloeosporioides 31.43 1.00e-07 48.50
IUUC-Cne-026937 Cryptococcus neoformans 31.31 3.00e-06 43.90
IUUC-Cme-027138 Cyanidioschyzon merolae 43.59 8.00e-06 42.40
IUUC-Dre-027576 Danio rerio 25.51 1.00e-03 35.80
IUUC-Dno-029119 Dasypus novemcinctus 26.21 1.00e-03 35.40
IUUC-Dor-030837 Dipodomys ordii 26.53 1.00e-03 35.40
IUUC-Dse-031557 Dothistroma septosporum 33.33 1.00e-08 52.40
IUUC-Dme-031872 Drosophila melanogaster 29.90 4.00e-06 43.90
IUUC-Eca-034182 Equus caballus 26.73 4.00e-03 33.90
IUUC-Eeu-035242 Erinaceus europaeus 26.53 2.00e-03 35.00
IUUC-Fca-036448 Felis catus 26.53 2.00e-03 35.00
IUUC-Fal-036857 Ficedula albicollis 26.21 1.00e-03 35.80
IUUC-Fox-037975 Fusarium oxysporum 35.65 6.00e-10 56.20
IUUC-Fso-038361 Fusarium solani 33.08 3.00e-09 54.30
IUUC-Gmo-038621 Gadus morhua 25.74 2.00e-04 38.10
IUUC-Ggr-039789 Gaeumannomyces graminis 35.78 1.00e-10 58.90
IUUC-Gga-040784 Gallus gallus 26.21 1.00e-03 35.80
IUUC-Gac-041531 Gasterosteus aculeatus 26.21 6.00e-05 40.00
IUUC-Gma-044281 Glycine max 28.85 3.00e-06 43.50
IUUC-Ggo-044790 Gorilla gorilla 26.53 2.00e-03 35.00
IUUC-Hsa-046024 Homo sapiens 26.53 2.00e-03 35.00
IUUC-Hvu-047480 Hordeum vulgare 29.52 2.00e-04 37.70
IUUC-Itr-048195 Ictidomys tridecemlineatus 26.53 2.00e-03 34.70
IUUC-Kpa-049226 Komagataella pastoris 40.83 3.00e-23 98.20
IUUC-Lch-049418 Latimeria chalumnae 26.73 2.00e-04 38.50
IUUC-Lpe-050742 Leersia perrieri 30.17 9.00e-05 38.90
IUUC-Loc-052496 Lepisosteus oculatus 25.74 4.00e-04 37.00
IUUC-Lma-053330 Leptosphaeria maculans 34.78 6.00e-11 58.50
IUUC-Laf-054543 Loxodonta africana 42.86 2.00e-03 32.70
IUUC-Mcc-055359 Macaca mulatta 26.53 2.00e-03 35.00
IUUC-Meu-056243 Macropus eugenii 33.33 1.00e-02 32.30
IUUC-Mor-057247 Magnaporthe oryzae 34.86 5.00e-11 60.10
IUUC-Mpo-057457 Magnaporthe poae 35.19 5.00e-10 56.60
IUUC-Mtr-058738 Medicago truncatula 29.09 2.00e-07 47.80
IUUC-Mla-059042 Melampsora laricipopulina 27.78 1.00e-06 44.70
IUUC-Mmr-061152 Microcebus murinus 26.53 2.00e-03 35.00
IUUC-Mdo-062086 Monodelphis domestica 26.21 7.00e-04 36.20
IUUC-Mmu-064131 Mus musculus 26.21 2.00e-03 35.00
IUUC-Mpu-066924 Mustela putorius furo 33.33 6.00e-03 32.70
IUUC-Mlu-068064 Myotis lucifugus 26.53 2.00e-03 35.00
IUUC-Nfi-068545 Neosartorya fischeri 33.33 7.00e-10 56.20
IUUC-Ncr-068847 Neurospora crassa 33.33 1.00e-10 58.50
IUUC-Nle-069563 Nomascus leucogenys 25.51 3.00e-03 33.90
IUUC-Ont-072472 Oreochromis niloticus 27.18 1.00e-04 39.30
IUUC-Oan-072770 Ornithorhynchus anatinus 26.21 1.00e-03 35.80
IUUC-Oba-075129 Oryza barthii 28.04 4.00e-05 40.00
IUUC-Obr-076216 Oryza brachyantha 26.17 5.00e-04 36.20
IUUC-Ogl-077663 Oryza glaberrima 28.04 3.00e-05 40.00
IUUC-Oin-079928 Oryza indica 28.04 3.00e-05 40.00
IUUC-Ome-081406 Oryza meridionalis 34.88 5.00e-03 33.10
IUUC-Oni-083080 Oryza nivara 28.04 4.00e-05 40.00
IUUC-Opu-083569 Oryza punctata 28.04 4.00e-05 40.00
IUUC-Osa-085922 Oryza sativa 28.04 3.00e-05 40.00
IUUC-Ola-087324 Oryzias latipes 25.96 8.00e-05 39.30
IUUC-Oga-089045 Otolemur garnettii 26.53 2.00e-03 35.00
IUUC-Oar-090407 Ovis aries 38.10 2.00e-03 32.70
IUUC-Ptr-090578 Pan troglodytes 26.53 1.00e-03 35.40
IUUC-Pan-092872 Papio anubis 26.53 2.00e-03 35.00
IUUC-Psi-093198 Pelodiscus sinensis 26.21 1.00e-03 35.80
IUUC-Pno-095051 Phaeosphaeria nodorum 35.90 5.00e-11 58.90
IUUC-Ppa-095547 Physcomitrella patens 29.13 7.00e-04 36.20
IUUC-Pfo-096879 Poecilia formosa 25.51 5.00e-04 36.60
IUUC-Pab-098731 Pongo abelii 35.90 8.00e-03 32.70
IUUC-Ppe-101400 Prunus persica 26.17 1.00e-05 41.60
IUUC-Pva-103158 Pteropus vampyrus 32.56 3.10e-02 29.30
IUUC-Pgr-103494 Puccinia graminis 27.36 7.00e-08 48.90
IUUC-Pte-104034 Pyrenophora teres 36.21 1.00e-12 65.10
IUUC-Pyt-104724 Pyrenophora triticirepentis 36.21 2.00e-12 64.70
IUUC-Rno-105937 Rattus norvegicus 26.21 2.00e-03 35.00
IUUC-Sha-106986 Sarcophilus harrisii 26.21 1.00e-03 35.80
IUUC-Sja-107775 Schizosaccharomyces japonicus 26.21 3.00e-05 40.40
IUUC-Spo-108172 Schizosaccharomyces pombe 26.53 5.00e-05 40.00
IUUC-Ssl-108639 Sclerotinia sclerotiorum 33.33 9.00e-10 54.70
IUUC-Smo-109349 Selaginella moellendorffii 38.30 2.50e-02 32.30
IUUC-Sit-110528 Setaria italica 29.51 4.30e-02 30.00
IUUC-Sly-111320 Solanum lycopersicum 29.25 1.00e-04 38.10
IUUC-Sar-113527 Sorex araneus 32.56 1.50e-02 29.30
IUUC-Sbi-114588 Sorghum bicolor 28.57 2.00e-04 38.10
IUUC-Tgu-116881 Taeniopygia guttata 26.21 3.00e-04 35.80
IUUC-Tru-118602 Takifugu rubripes 25.51 2.00e-04 38.10
IUUC-Tni-119694 Tetraodon nigroviridis 25.51 2.00e-04 38.10
IUUC-Tca-121244 Theobroma cacao 36.84 6.00e-03 32.70
IUUC-Tvi-122267 Trichoderma virens 30.23 4.00e-08 50.10
IUUC-Tae-123278 Triticum aestivum 28.57 2.00e-04 37.40
IUUC-Tur-126552 Triticum urartu 36.59 3.00e-03 33.50
IUUC-Tme-126941 Tuber melanosporum 28.97 1.00e-07 48.50
IUUC-Tbe-127775 Tupaia belangeri 43.59 4.00e-03 31.60
IUUC-Ttr-128473 Tursiops truncatus 26.53 2.00e-03 34.70
IUUC-Vda-129665 Verticillium dahliae 32.41 7.00e-09 52.80
IUUC-Vvi-131383 Vitis vinifera 31.37 1.00e-05 42.00
IUUC-Xtr-132581 Xenopus tropicalis 37.88 2.00e-03 32.30
IUUC-Xma-133150 Xiphophorus maculatus 25.51 5.00e-04 37.00
IUUC-Yli-134627 Yarrowia lipolytica 31.06 7.00e-12 62.00
IUUC-Zma-134939 Zea mays 27.62 2.00e-04 37.70
Created Date 25-Jun-2017

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