iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107609

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01217347

Gene Name

LNX1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000015394.1	ENSSHAT00000018282.1	ENSSHAP00000018132.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	80.11	0.00e+00	1155.00	IUUC-Hsa-046470
E3 activity/RING/RING	78.07	0.00e+00	1134.00	IUUC-Mmu-063364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MIQPDPFEDP DSTSETLCAI CGQTHSPEEN HFYSYAEEVD DDLICHICLQ ALLEPLDTPC 60
GHTYCTLCLT NFLVEKDFCP VDRKTIILQN CKKSSILVNK LLNKLMVTCP FTEHCSEVLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAAAGTACA TAGCTCGGTG CAAATGAGTC TAAGTGAATA ATTTGCACCT GGCTCAGGTA 60
TTCGGGCAGA TGCCAGGCAG GGAGGAATTT ACTGCCCGGC TCGATCAGTC ACCAAGGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001478--PDZ
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00595--PDZ
PF00097--zf-C3HC4

SMART

SM00228--PDZ
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051260--P:protein homooligomerization
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002005	Ailuropoda melanoleuca	78.83	0.00e+00	1079.00
IUUC-Apl-003561	Anas platyrhynchos	76.41	0.00e+00	1082.00
IUUC-Aca-005346	Anolis carolinensis	73.23	0.00e+00	1078.00
IUUC-Bta-012970	Bos taurus	79.53	0.00e+00	1126.00
IUUC-Cja-019412	Callithrix jacchus	79.70	0.00e+00	1122.00
IUUC-Cfa-020735	Canis familiaris	79.43	0.00e+00	1170.00
IUUC-Cpo-022198	Cavia porcellus	71.25	0.00e+00	965.00
IUUC-Cgl-026455	Colletotrichum gloeosporioides	32.28	4.00e-16	79.30
IUUC-Dre-028841	Danio rerio	49.62	3.00e-28	117.00
IUUC-Dno-028889	Dasypus novemcinctus	80.50	0.00e+00	1179.00
IUUC-Dor-030810	Dipodomys ordii	71.18	0.00e+00	829.00
IUUC-Fca-036264	Felis catus	80.69	0.00e+00	1111.00
IUUC-Fal-037198	Ficedula albicollis	76.27	0.00e+00	1143.00
IUUC-Gga-040766	Gallus gallus	71.04	0.00e+00	1084.00
IUUC-Ggo-045057	Gorilla gorilla	80.25	0.00e+00	1152.00
IUUC-Hsa-046470	Homo sapiens	80.11	0.00e+00	1171.00
IUUC-Itr-048393	Ictidomys tridecemlineatus	80.52	0.00e+00	1191.00
IUUC-Lch-050081	Latimeria chalumnae	65.44	0.00e+00	972.00
IUUC-Loc-052884	Lepisosteus oculatus	62.60	0.00e+00	942.00
IUUC-Laf-054498	Loxodonta africana	81.61	0.00e+00	1194.00
IUUC-Meu-056401	Macropus eugenii	54.91	5.00e-141	494.00
IUUC-Mla-059113	Melampsora laricipopulina	34.69	1.00e-09	57.40
IUUC-Mga-059504	Meleagris gallopavo	75.21	0.00e+00	1120.00
IUUC-Mmr-060696	Microcebus murinus	58.31	0.00e+00	727.00
IUUC-Mdo-062731	Monodelphis domestica	91.30	0.00e+00	1356.00
IUUC-Mmu-063364	Mus musculus	78.07	0.00e+00	1150.00
IUUC-Mpu-066626	Mustela putorius furo	79.84	0.00e+00	1144.00
IUUC-Mlu-068207	Myotis lucifugus	78.75	0.00e+00	1129.00
IUUC-Nle-069304	Nomascus leucogenys	80.38	0.00e+00	1173.00
IUUC-Opr-071080	Ochotona princeps	67.36	0.00e+00	974.00
IUUC-Ont-072002	Oreochromis niloticus	58.57	0.00e+00	824.00
IUUC-Ola-086477	Oryzias latipes	58.26	0.00e+00	842.00
IUUC-Oga-089142	Otolemur garnettii	77.55	0.00e+00	1106.00
IUUC-Oar-090359	Ovis aries	78.61	0.00e+00	1131.00
IUUC-Ptr-090797	Pan troglodytes	80.25	0.00e+00	1172.00
IUUC-Pan-091910	Papio anubis	79.84	0.00e+00	1167.00
IUUC-Psi-093386	Pelodiscus sinensis	75.65	0.00e+00	1093.00
IUUC-Pfo-096370	Poecilia formosa	58.32	0.00e+00	816.00
IUUC-Pab-097761	Pongo abelii	79.93	0.00e+00	891.00
IUUC-Pva-102443	Pteropus vampyrus	81.42	0.00e+00	910.00
IUUC-Rno-106030	Rattus norvegicus	78.20	0.00e+00	1149.00
IUUC-Sar-113333	Sorex araneus	77.55	0.00e+00	1131.00
IUUC-Ssc-116222	Sus scrofa	70.75	0.00e+00	987.00
IUUC-Tgu-117019	Taeniopygia guttata	76.94	0.00e+00	1115.00
IUUC-Tru-118481	Takifugu rubripes	59.73	0.00e+00	855.00
IUUC-Tni-119796	Tetraodon nigroviridis	49.20	0.00e+00	641.00
IUUC-Tbe-127538	Tupaia belangeri	76.57	0.00e+00	1117.00
IUUC-Ttr-128787	Tursiops truncatus	78.23	0.00e+00	1091.00
IUUC-Xtr-132476	Xenopus tropicalis	64.11	0.00e+00	902.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence