iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086809

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04044460

Gene Name

rnft1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000012310.1	ENSORLT00000015412.1	ENSORLP00000015411.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-07	31.6	340	378

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+ +f+  p  l C+H+f+a+C+  w       ++e +CPlCr
   Q: 340  CPICQGEFRS-PQALLCQHIFCAECITLW------FNREKSCPLCR 378
           ********88.999***************......**********8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MQPSSVDGGV QTGNGLSLTL QPELLTRTPG ASAAATATPD KSGGEVHVSM TGGESGGGAS 60
SRRSRAHSHS HSHSHRHDQG APRSTSEHEL DAPDSDPDSG EPSSSLSDLR CLFRWIQRSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGACGTCA AATCAGCGTC AAAAATGTCC CGTAGGACTT AGCTTCACGG CTAATAACCC 60
GCCGTTGGTT TTTGATTTTC TTTTACTTTG GGTTTGTTTT GGTTACCTGG CTTTTGTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001586	Ailuropoda melanoleuca	52.50	9.00e-91	327.00
IUUC-Apl-003875	Anas platyrhynchos	52.92	7.00e-77	280.00
IUUC-Aca-004325	Anolis carolinensis	50.32	3.00e-75	275.00
IUUC-Ame-010748	Astyanax mexicanus	58.40	1.00e-110	392.00
IUUC-Bta-013167	Bos taurus	54.38	6.00e-94	337.00
IUUC-Cja-019669	Callithrix jacchus	54.69	1.00e-94	340.00
IUUC-Cfa-020610	Canis familiaris	52.50	4.00e-91	327.00
IUUC-Cpo-021979	Cavia porcellus	51.88	1.00e-81	296.00
IUUC-Csa-023752	Chlorocebus sabaeus	53.75	1.00e-93	336.00
IUUC-Cho-024880	Choloepus hoffmanni	50.52	2.00e-77	283.00
IUUC-Dre-028522	Danio rerio	62.33	2.00e-95	342.00
IUUC-Dno-029312	Dasypus novemcinctus	53.44	8.00e-92	330.00
IUUC-Dor-030524	Dipodomys ordii	43.67	2.00e-48	185.00
IUUC-Ete-032456	Echinops telfairi	46.75	4.00e-75	275.00
IUUC-Eeu-034649	Erinaceus europaeus	52.94	9.00e-31	127.00
IUUC-Fca-036321	Felis catus	52.01	2.00e-89	322.00
IUUC-Fal-036873	Ficedula albicollis	53.21	4.00e-79	288.00
IUUC-Gmo-038501	Gadus morhua	61.98	8.00e-111	393.00
IUUC-Gga-040583	Gallus gallus	53.33	1.00e-81	296.00
IUUC-Gac-042530	Gasterosteus aculeatus	66.00	4.00e-124	437.00
IUUC-Ggo-045577	Gorilla gorilla	52.65	4.00e-91	328.00
IUUC-Hsa-046395	Homo sapiens	53.61	1.00e-92	333.00
IUUC-Itr-048888	Ictidomys tridecemlineatus	53.44	2.00e-93	335.00
IUUC-Lch-049516	Latimeria chalumnae	59.04	6.00e-100	357.00
IUUC-Loc-052692	Lepisosteus oculatus	62.75	2.00e-111	395.00
IUUC-Laf-054478	Loxodonta africana	54.38	2.00e-94	338.00
IUUC-Meu-056056	Macropus eugenii	56.06	2.00e-78	285.00
IUUC-Mga-059908	Meleagris gallopavo	53.36	1.00e-65	242.00
IUUC-Mdo-063071	Monodelphis domestica	55.14	3.00e-93	335.00
IUUC-Mmu-063446	Mus musculus	52.78	2.00e-89	322.00
IUUC-Mpu-065810	Mustela putorius furo	50.00	1.00e-71	263.00
IUUC-Nle-069009	Nomascus leucogenys	53.44	3.00e-99	355.00
IUUC-Ont-071863	Oreochromis niloticus	72.25	6.00e-135	473.00
IUUC-Oan-073490	Ornithorhynchus anatinus	53.44	3.00e-95	341.00
IUUC-Ocu-074346	Oryctolagus cuniculus	54.15	6.00e-91	327.00
IUUC-Oga-087950	Otolemur garnettii	54.64	8.00e-89	320.00
IUUC-Oar-089816	Ovis aries	54.69	9.00e-95	340.00
IUUC-Ptr-090736	Pan troglodytes	53.61	1.00e-92	333.00
IUUC-Psi-093766	Pelodiscus sinensis	53.57	4.00e-88	317.00
IUUC-Pfo-097090	Poecilia formosa	71.74	4.00e-118	417.00
IUUC-Pab-098474	Pongo abelii	54.06	1.00e-93	336.00
IUUC-Rno-105126	Rattus norvegicus	48.55	3.00e-91	328.00
IUUC-Sce-106136	Saccharomyces cerevisiae	56.76	3.00e-06	46.60
IUUC-Sha-107537	Sarcophilus harrisii	56.07	2.00e-95	342.00
IUUC-Sar-113494	Sorex araneus	63.16	4.00e-28	118.00
IUUC-Tgu-117409	Taeniopygia guttata	55.22	3.00e-84	304.00
IUUC-Tru-117926	Takifugu rubripes	68.62	1.00e-126	446.00
IUUC-Tsy-118995	Tarsius syrichta	53.61	1.00e-86	313.00
IUUC-Tni-120361	Tetraodon nigroviridis	67.74	2.00e-135	475.00
IUUC-Tbe-128158	Tupaia belangeri	38.12	3.00e-48	185.00
IUUC-Ttr-128496	Tursiops truncatus	52.81	9.00e-90	323.00
IUUC-Vpa-130045	Vicugna pacos	44.12	3.00e-55	209.00
IUUC-Xtr-132923	Xenopus tropicalis	49.69	3.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence