iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109547

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377575

Gene Name

SELMODRAFT_409107

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_409107	EFJ30597	EFJ30597

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-33	113.3	345	384
UBD/Beta-Prp	8.30e-49	167.1	255	386

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gHt+ v++  f ++ ++++++s Dgt+kvWD+rt ++l++
   Q: 345  GHTSYVNDAIFaTEvNRIITASSDGTVKVWDMRTTDCLQT 384
           8*******99**999**********************996 PP

UBD/Beta-Prp

   S: 130  eetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrf 230
           e+ +  h+++v +v+v+ d+ +l+sG+ D+++++W+++tg++l+++ ++h   v+ +sf+++  +++s+s d t ++  l++g+ +++++ght+ v++  f
   Q: 255  EDSFMMHEDAVLTVAVSRDSEMLASGAQDGKIKVWRIRTGQCLKRFDKAHGMGVTTVSFSRDNSQILSASFDETARIHGLKSGKQLKEFRGHTSYVNDAIF 355
           447889****************************************999**************************************************** PP
   S: 231  spnderlvsgssDgsiriWdlrsgdllktlq 261
             + +r++++ssDg++++Wd+r+ d+l+tl+
   Q: 356  ATEVNRIITASSDGTVKVWDMRTTDCLQTLK 386
           *****************************97 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MALEIEARDV IKVMLQFCKE NSLHQTFQTI QNECQVSLNS VENYDAFVSD MNDGRWDAVL 60
PQVAQLKLPK KKLEDLYEQV VLEMIEVREL DTARAILRQT QAMDYMKQEQ PERYLRLEHL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCTGG AGATCGAAGC ACGAGAGTAA GCGCTTCCCT TGTAAATGCC GATTCTCTGA 60
GCGCCGCCGC ATTCTCCAGC GTGATCAAGG TGATGCTCCA GTTTTGCAAG GAGAATTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00320--WD40

KEGG

smo:SELMODRAFT_409107

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001330	Ailuropoda melanoleuca	63.55	0.00e+00	708.00
IUUC-Atr-002570	Amborella trichopoda	79.06	0.00e+00	874.00
IUUC-Apl-003826	Anas platyrhynchos	63.77	0.00e+00	678.00
IUUC-Aca-005183	Anolis carolinensis	63.30	0.00e+00	702.00
IUUC-Ame-011374	Astyanax mexicanus	62.77	0.00e+00	702.00
IUUC-Bta-012890	Bos taurus	63.55	0.00e+00	708.00
IUUC-Cja-019336	Callithrix jacchus	63.55	0.00e+00	708.00
IUUC-Cfa-021108	Canis familiaris	63.55	0.00e+00	708.00
IUUC-Cpo-022052	Cavia porcellus	63.55	0.00e+00	708.00
IUUC-Cre-022595	Chlamydomonas reinhardtii	63.09	0.00e+00	706.00
IUUC-Csa-023488	Chlorocebus sabaeus	63.55	0.00e+00	708.00
IUUC-Cho-025010	Choloepus hoffmanni	55.95	2.00e-174	604.00
IUUC-Cin-025251	Ciona intestinalis	60.85	0.00e+00	677.00
IUUC-Csv-026092	Ciona savignyi	55.97	1.00e-176	611.00
IUUC-Dre-027382	Danio rerio	62.57	0.00e+00	696.00
IUUC-Dno-029007	Dasypus novemcinctus	63.74	0.00e+00	709.00
IUUC-Dor-030180	Dipodomys ordii	54.42	8.00e-122	429.00
IUUC-Ete-032933	Echinops telfairi	63.02	8.00e-167	578.00
IUUC-Eca-033864	Equus caballus	63.69	0.00e+00	696.00
IUUC-Eeu-034635	Erinaceus europaeus	58.43	9.00e-148	515.00
IUUC-Fca-036119	Felis catus	63.55	0.00e+00	708.00
IUUC-Fal-037396	Ficedula albicollis	63.93	0.00e+00	690.00
IUUC-Gmo-038962	Gadus morhua	61.99	0.00e+00	693.00
IUUC-Gga-040134	Gallus gallus	63.55	0.00e+00	707.00
IUUC-Gac-041630	Gasterosteus aculeatus	62.18	0.00e+00	695.00
IUUC-Ggo-045061	Gorilla gorilla	63.30	0.00e+00	703.00
IUUC-Hsa-046215	Homo sapiens	63.55	0.00e+00	708.00
IUUC-Itr-048826	Ictidomys tridecemlineatus	63.55	0.00e+00	708.00
IUUC-Lch-050209	Latimeria chalumnae	58.95	0.00e+00	639.00
IUUC-Loc-052739	Lepisosteus oculatus	58.38	0.00e+00	634.00
IUUC-Laf-053895	Loxodonta africana	63.42	0.00e+00	703.00
IUUC-Mcc-055183	Macaca mulatta	63.55	0.00e+00	708.00
IUUC-Mga-059222	Meleagris gallopavo	65.31	2.00e-170	591.00
IUUC-Mmr-061749	Microcebus murinus	63.69	0.00e+00	697.00
IUUC-Mdo-062920	Monodelphis domestica	63.35	0.00e+00	707.00
IUUC-Mmu-063228	Mus musculus	63.55	0.00e+00	708.00
IUUC-Mpu-066162	Mustela putorius furo	63.55	0.00e+00	708.00
IUUC-Mlu-067471	Myotis lucifugus	63.16	0.00e+00	705.00
IUUC-Nle-070129	Nomascus leucogenys	63.55	0.00e+00	708.00
IUUC-Opr-071176	Ochotona princeps	63.69	0.00e+00	696.00
IUUC-Ont-071830	Oreochromis niloticus	62.57	0.00e+00	702.00
IUUC-Oan-072778	Ornithorhynchus anatinus	63.74	0.00e+00	709.00
IUUC-Ocu-074570	Oryctolagus cuniculus	63.55	0.00e+00	708.00
IUUC-Ola-087092	Oryzias latipes	62.38	0.00e+00	698.00
IUUC-Oga-088278	Otolemur garnettii	57.92	5.00e-180	623.00
IUUC-Oar-089664	Ovis aries	63.18	0.00e+00	703.00
IUUC-Ptr-090991	Pan troglodytes	63.55	0.00e+00	708.00
IUUC-Pan-092697	Papio anubis	63.55	0.00e+00	708.00
IUUC-Psi-093204	Pelodiscus sinensis	63.93	0.00e+00	691.00
IUUC-Pfo-096988	Poecilia formosa	62.77	0.00e+00	703.00
IUUC-Pab-098288	Pongo abelii	63.55	0.00e+00	708.00
IUUC-Pca-100583	Procavia capensis	59.05	0.00e+00	631.00
IUUC-Pva-102711	Pteropus vampyrus	63.55	0.00e+00	708.00
IUUC-Rno-105614	Rattus norvegicus	63.55	0.00e+00	708.00
IUUC-Sha-107017	Sarcophilus harrisii	63.55	0.00e+00	708.00
IUUC-Sar-112955	Sorex araneus	56.81	8.00e-176	608.00
IUUC-Ssc-116054	Sus scrofa	63.55	0.00e+00	708.00
IUUC-Tgu-116909	Taeniopygia guttata	62.89	0.00e+00	697.00
IUUC-Tru-118195	Takifugu rubripes	62.57	0.00e+00	702.00
IUUC-Tsy-119420	Tarsius syrichta	58.28	0.00e+00	628.00
IUUC-Tni-120416	Tetraodon nigroviridis	62.38	0.00e+00	697.00
IUUC-Tbe-128009	Tupaia belangeri	65.38	3.00e-134	471.00
IUUC-Ttr-128719	Tursiops truncatus	57.31	0.00e+00	625.00
IUUC-Vpa-130579	Vicugna pacos	63.35	0.00e+00	701.00
IUUC-Xtr-132950	Xenopus tropicalis	58.72	0.00e+00	648.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence