iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121470

Ensembl Protein ID

EOY23965

UniProt Accession

A0A061G276; A0A061G276_THECC

Genbank Protein ID

EOY23965.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001881

Gene Name

TCM_015691

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_015691	EOY23965	EOY23965

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-06	28.6	102	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl +f+d+  +++l  C Hvfh++C+  w         + +CP+Cr
   Q: 102  CTICLGEFSDEdmLRLLTiCCHVFHKECVDLW------LESHKTCPVCR 144
           ********77655555446*************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSTYSPYAQS PSSNYNPPVP IIIAIIFVLL FFFGFFAIYF FRCFVHNLVV LWNRRRNPSG 60
ALVGTAGANM SNGLDPELIQ AFPTFSYSSV KEFRREKYGL ECTICLGEFS DEDMLRLLTI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGCATCAG CTTTCCAAAT TAAGCTTACC ACTTTTTGTC ATACTCATAA AAGACATCGA 60
CATGTGTCCT TGTTCTAACA CAAAAACAAA GGAAAAATCT AAGCAAATAA AATAAAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005577	Arabidopsis lyrata	42.28	3.00e-50	191.00
IUUC-Ath-007042	Arabidopsis thaliana	42.28	2.00e-49	187.00
IUUC-Bol-015459	Brassica oleracea	42.91	2.00e-52	198.00
IUUC-Bra-018021	Brassica rapa	48.82	1.00e-49	190.00
IUUC-Cme-027309	Cyanidioschyzon merolae	46.81	1.00e-10	61.20
IUUC-Gma-042843	Glycine max	39.68	1.00e-39	155.00
IUUC-Mtr-058535	Medicago truncatula	45.69	3.00e-43	167.00
IUUC-Psi-093642	Pelodiscus sinensis	32.80	2.00e-12	65.10
IUUC-Pop-099444	Populus trichocarpa	49.37	2.00e-59	221.00
IUUC-Ppe-101206	Prunus persica	51.41	6.00e-62	229.00
IUUC-Sly-111357	Solanum lycopersicum	44.84	1.00e-53	202.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence