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Tag Content
UUCD2 ID IUUC-Pop-098805
UUCD1 version UUC-PoT-00668
Ensembl Protein ID POPTR_0002s25010.1
UniProt Accession B9GQP1; B9GQP1_POPTR
Genbank Protein ID EEE82347.1
Protein Name Tetratricopeptide repeat-containing family protein
Genbank Nucleotide ID CM000338
Gene Name POPTRDRAFT_830590; POPTR_0002s25020g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0002s25010 POPTR_0002s25010.1 POPTR_0002s25010.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/U-box 2.90e-23 82.8 118 191
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box
   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           evp++++C I+l++ rdPv++psG++y+r+ +  +l++ g+ +Pvtr+pl++++lvPnl++++ ++a+++++++
   Q: 118  EVPDYLCCKITLDILRDPVITPSGVSYERAVLLDHLEKVGNFDPVTREPLEPSQLVPNLAIKEAVHAYLDKHGW 191
           69*********************************************************************987 PP
   
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MCRLLILALN LKLALYFYQA LDLGRGANPN GYMVEEIWEE LAKAKYLEWE EESTQRSWEL 60
QSLKEACERA LKEKHFLDDS ETEGFLDDPI VSIVSHLQQL ELLGQVFQKA AEDDTPSEVP 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-098805|E3,U-box|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAATTTTATG AGTGACTTTG ATCATATTAG TTTCTATAGC CGCTGTTGCA AATTGGATCC 60
TAATACATGT TGAATTTTAG TTGCTGTTGG ATACAAAGAA AATGTGCAGG CTATTAATCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-098805|E3,U-box|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat
Interpro

IPR007330--MIT
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50005--TPR
PS50293--TPR_REGION
PS51698--U_BOX
Pfam

PF13181--TPR_8
PF04564--U-box
SMART

SM00028--TPR
SM00504--Ubox
Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
KEGG pop:POPTR_0002s25020g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000537 Aegilops tauschii 60.89 4.00e-60 223.00
IUUC-Aml-001350 Ailuropoda melanoleuca 43.88 7.00e-25 106.00
IUUC-Atr-003168 Amborella trichopoda 65.00 3.00e-61 227.00
IUUC-Apl-003736 Anas platyrhynchos 43.88 4.00e-25 107.00
IUUC-Aca-004751 Anolis carolinensis 38.89 6.00e-23 100.00
IUUC-Aly-006292 Arabidopsis lyrata 65.34 1.00e-65 242.00
IUUC-Ath-007012 Arabidopsis thaliana 65.34 1.00e-65 242.00
IUUC-Acl-008025 Aspergillus clavatus 33.33 2.00e-18 85.50
IUUC-Afl-008721 Aspergillus flavus 33.33 1.00e-17 82.80
IUUC-Afu-008853 Aspergillus fumigatus 34.50 2.00e-18 85.50
IUUC-Ani-009349 Aspergillus nidulans 48.65 2.00e-16 79.30
IUUC-Ang-009674 Aspergillus niger 48.65 2.00e-16 79.30
IUUC-Aor-010014 Aspergillus oryzae 33.33 2.00e-17 82.00
IUUC-Ate-010467 Aspergillus terreus 38.18 3.00e-17 82.00
IUUC-Ame-011215 Astyanax mexicanus 36.31 8.00e-25 106.00
IUUC-Bgr-011971 Blumeria graminis 39.76 6.00e-15 73.90
IUUC-Bta-013025 Bos taurus 43.88 1.00e-24 106.00
IUUC-Bci-013945 Botrytis cinerea 40.91 2.00e-16 79.30
IUUC-Bdi-014801 Brachypodium distachyon 61.58 1.00e-60 225.00
IUUC-Bol-015676 Brassica oleracea 66.10 4.00e-65 241.00
IUUC-Bra-017897 Brassica rapa 66.67 1.00e-66 245.00
IUUC-Cel-018323 Caenorhabditis elegans 35.67 2.00e-22 99.00
IUUC-Cja-019657 Callithrix jacchus 42.86 1.00e-24 106.00
IUUC-Cfa-020470 Canis familiaris 43.88 5.00e-25 107.00
IUUC-Cpo-022033 Cavia porcellus 42.86 1.00e-24 106.00
IUUC-Cre-022896 Chlamydomonas reinhardtii 36.31 2.00e-29 122.00
IUUC-Csa-023038 Chlorocebus sabaeus 42.86 1.00e-24 106.00
IUUC-Cin-025381 Ciona intestinalis 43.33 2.00e-24 105.00
IUUC-Cgl-026524 Colletotrichum gloeosporioides 43.75 8.00e-19 86.70
IUUC-Dre-027610 Danio rerio 42.98 1.00e-25 109.00
IUUC-Dno-030087 Dasypus novemcinctus 41.74 1.00e-24 106.00
IUUC-Dor-031029 Dipodomys ordii 47.25 2.00e-21 95.50
IUUC-Dse-031275 Dothistroma septosporum 38.89 3.00e-12 65.10
IUUC-Dme-031856 Drosophila melanogaster 33.51 3.00e-24 104.00
IUUC-Ete-033087 Echinops telfairi 31.68 5.00e-12 64.30
IUUC-Eca-033512 Equus caballus 43.88 6.00e-25 107.00
IUUC-Fca-036460 Felis catus 43.88 9.00e-25 106.00
IUUC-Fal-037441 Ficedula albicollis 43.88 6.00e-25 107.00
IUUC-Fox-038028 Fusarium oxysporum 31.55 7.00e-16 77.00
IUUC-Fso-038323 Fusarium solani 42.11 5.00e-17 80.90
IUUC-Gmo-038511 Gadus morhua 42.70 8.00e-21 93.60
IUUC-Ggr-039964 Gaeumannomyces graminis 48.65 3.00e-16 78.20
IUUC-Gga-040854 Gallus gallus 43.88 5.00e-25 107.00
IUUC-Gac-042175 Gasterosteus aculeatus 37.60 7.00e-18 83.60
IUUC-Gma-044063 Glycine max 76.27 2.00e-71 261.00
IUUC-Ggo-044512 Gorilla gorilla 42.86 1.00e-24 106.00
IUUC-Hsa-046872 Homo sapiens 42.86 1.00e-24 106.00
IUUC-Hvu-047661 Hordeum vulgare 62.96 1.00e-56 212.00
IUUC-Itr-048871 Ictidomys tridecemlineatus 42.86 1.00e-24 106.00
IUUC-Lch-049988 Latimeria chalumnae 44.79 1.00e-24 106.00
IUUC-Lpe-050693 Leersia perrieri 62.50 6.00e-61 226.00
IUUC-Loc-052195 Lepisosteus oculatus 46.67 1.00e-24 105.00
IUUC-Lma-053207 Leptosphaeria maculans 46.51 8.00e-16 78.60
IUUC-Laf-054584 Loxodonta africana 36.53 3.00e-25 108.00
IUUC-Mcc-054689 Macaca mulatta 42.86 1.00e-24 106.00
IUUC-Meu-055998 Macropus eugenii 50.98 3.00e-13 68.60
IUUC-Mor-057116 Magnaporthe oryzae 34.50 2.00e-20 92.00
IUUC-Mtr-057684 Medicago truncatula 73.60 1.00e-68 252.00
IUUC-Mga-059332 Meleagris gallopavo 43.88 4.00e-25 107.00
IUUC-Mmr-061377 Microcebus murinus 40.71 1.00e-24 106.00
IUUC-Mdo-061963 Monodelphis domestica 43.88 8.00e-25 107.00
IUUC-Mmu-063146 Mus musculus 42.86 1.00e-24 105.00
IUUC-Mac-064932 Musa acuminata 68.18 2.00e-67 247.00
IUUC-Mpu-066418 Mustela putorius furo 43.88 8.00e-25 107.00
IUUC-Mlu-067066 Myotis lucifugus 43.88 1.00e-24 106.00
IUUC-Nfi-068601 Neosartorya fischeri 34.50 2.00e-18 85.50
IUUC-Ncr-068761 Neurospora crassa 36.84 4.00e-13 68.20
IUUC-Nle-069374 Nomascus leucogenys 42.86 1.00e-24 106.00
IUUC-Opr-070765 Ochotona princeps 37.41 6.00e-25 106.00
IUUC-Ont-071996 Oreochromis niloticus 42.11 2.00e-25 108.00
IUUC-Oba-075732 Oryza barthii 59.56 1.00e-59 222.00
IUUC-Obr-076709 Oryza brachyantha 61.93 6.00e-61 226.00
IUUC-Ogl-077495 Oryza glaberrima 61.36 1.00e-59 222.00
IUUC-Ogu-078247 Oryza glumaepatula 59.56 2.00e-59 221.00
IUUC-Oin-079376 Oryza indica 61.36 1.00e-59 222.00
IUUC-Olo-080492 Oryza longistaminata 59.02 9.00e-58 218.00
IUUC-Ome-081935 Oryza meridionalis 45.95 2.00e-34 141.00
IUUC-Oni-082535 Oryza nivara 59.56 2.00e-59 221.00
IUUC-Opu-083988 Oryza punctata 60.11 1.00e-59 223.00
IUUC-Oru-085153 Oryza rufipogon 61.36 5.00e-60 223.00
IUUC-Osa-085936 Oryza sativa 45.54 5.00e-18 83.60
IUUC-Ola-087081 Oryzias latipes 42.50 4.00e-25 108.00
IUUC-Olu-087790 Ostreococcus lucimarinus 38.60 2.00e-29 121.00
IUUC-Oga-088331 Otolemur garnettii 42.86 1.00e-24 106.00
IUUC-Oar-089987 Ovis aries 43.88 2.00e-24 105.00
IUUC-Ptr-090855 Pan troglodytes 42.86 1.00e-24 106.00
IUUC-Pan-092801 Papio anubis 46.07 1.00e-24 106.00
IUUC-Psi-093393 Pelodiscus sinensis 38.89 2.00e-25 108.00
IUUC-Pma-094680 Petromyzon marinus 52.70 4.00e-24 104.00
IUUC-Pno-094913 Phaeosphaeria nodorum 45.45 5.00e-15 74.30
IUUC-Ppa-095508 Physcomitrella patens 44.44 5.00e-47 180.00
IUUC-Pfo-096850 Poecilia formosa 42.98 5.00e-25 107.00
IUUC-Pab-097963 Pongo abelii 42.86 1.00e-24 106.00
IUUC-Pca-100788 Procavia capensis 44.90 5.00e-25 107.00
IUUC-Ppe-101221 Prunus persica 75.28 4.00e-77 280.00
IUUC-Pva-103076 Pteropus vampyrus 42.86 1.00e-23 103.00
IUUC-Pte-104237 Pyrenophora teres 48.78 6.00e-17 80.90
IUUC-Pyt-104468 Pyrenophora triticirepentis 47.56 2.00e-16 79.30
IUUC-Rno-105204 Rattus norvegicus 42.86 9.00e-25 106.00
IUUC-Sha-106579 Sarcophilus harrisii 43.88 7.00e-25 106.00
IUUC-Smo-109215 Selaginella moellendorffii 53.98 2.00e-51 194.00
IUUC-Sit-110665 Setaria italica 61.24 9.00e-61 226.00
IUUC-Sly-111473 Solanum lycopersicum 72.16 3.00e-75 274.00
IUUC-Stu-112353 Solanum tuberosum 72.47 4.00e-75 273.00
IUUC-Sbi-114250 Sorghum bicolor 63.64 4.00e-61 227.00
IUUC-Ssc-115416 Sus scrofa 43.88 6.00e-25 107.00
IUUC-Tgu-117272 Taeniopygia guttata 43.30 2.00e-23 100.00
IUUC-Tru-117777 Takifugu rubripes 45.83 2.00e-25 108.00
IUUC-Tni-120572 Tetraodon nigroviridis 45.83 3.00e-25 108.00
IUUC-Tca-121149 Theobroma cacao 71.75 2.00e-71 261.00
IUUC-Tre-122230 Trichoderma reesei 42.71 2.00e-18 85.90
IUUC-Tvi-122678 Trichoderma virens 46.88 2.00e-20 92.00
IUUC-Tae-123963 Triticum aestivum 60.34 9.00e-60 223.00
IUUC-Tur-126009 Triticum urartu 60.34 6.00e-59 220.00
IUUC-Tme-126948 Tuber melanosporum 48.08 2.00e-20 92.00
IUUC-Ttr-129031 Tursiops truncatus 43.88 7.00e-25 107.00
IUUC-Vda-130023 Verticillium dahliae 34.84 5.00e-18 84.30
IUUC-Vvi-131091 Vitis vinifera 72.67 6.00e-60 221.00
IUUC-Xtr-132871 Xenopus tropicalis 44.79 4.00e-25 107.00
IUUC-Xma-134220 Xiphophorus maculatus 42.98 4.00e-25 107.00
IUUC-Yli-134462 Yarrowia lipolytica 43.53 7.00e-17 80.50
IUUC-Zma-135007 Zea mays 63.64 4.00e-61 227.00
Created Date 25-Jun-2017

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