iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114132

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G173800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g038270	Sb03g038270.1	Sb03g038270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	29.9	122	164

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f dg  ++vlp C H +h  C+  w         +++CP+Cr
   Q: 122  CAICLGEFADGekVRVLPrCAHGYHVRCVDTW------LLSHDSCPTCR 164
           ********55555999999*************......9999******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGVHAKSMSW YMSPPGSPPA PGSAATEAQH ALSSSPGGSS DASFDTNMVI ILAALLFALL 60
FALGLNSLAR CLIRWARRAS EGEDGGAGAG AGGLKKRALR SIPVEVYGAC GADGAAVDAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAAAACTT TTCCAAACCA AGTTAGCTGC GGAGTGGGTG CTCTAAAGCT AACGCTCTCT 60
GCAGTCTGGA CTCTGGTTCG CGGTGGCCGC AGCTGCAGCG TCCCCTCCCT TTTTTTGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_09g023450

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003049	Amborella trichopoda	58.60	7.00e-36	142.00
IUUC-Apl-004188	Anas platyrhynchos	52.08	3.00e-12	66.60
IUUC-Aly-006386	Arabidopsis lyrata	54.23	2.00e-28	117.00
IUUC-Ath-007408	Arabidopsis thaliana	54.23	3.00e-28	116.00
IUUC-Ame-011764	Astyanax mexicanus	52.17	2.00e-11	64.30
IUUC-Bdi-014577	Brachypodium distachyon	63.30	7.00e-35	139.00
IUUC-Bol-015294	Brassica oleracea	55.00	5.00e-28	116.00
IUUC-Bra-016992	Brassica rapa	53.57	3.00e-28	117.00
IUUC-Dre-027553	Danio rerio	56.25	4.00e-13	69.30
IUUC-Gmo-039099	Gadus morhua	56.25	4.00e-13	68.90
IUUC-Gga-041243	Gallus gallus	45.31	2.00e-12	66.60
IUUC-Gma-043926	Glycine max	59.73	1.00e-34	138.00
IUUC-Hvu-047060	Hordeum vulgare	56.21	3.00e-32	130.00
IUUC-Lpe-050757	Leersia perrieri	68.12	3.00e-47	180.00
IUUC-Loc-051830	Lepisosteus oculatus	53.19	1.00e-11	64.30
IUUC-Mtr-058744	Medicago truncatula	57.97	2.00e-30	124.00
IUUC-Mga-059706	Meleagris gallopavo	45.31	1.00e-12	67.80
IUUC-Mac-064889	Musa acuminata	65.67	4.00e-33	133.00
IUUC-Ogl-077815	Oryza glaberrima	74.71	4.00e-40	156.00
IUUC-Ogu-078945	Oryza glumaepatula	85.45	3.00e-24	103.00
IUUC-Oin-079303	Oryza indica	74.42	4.00e-39	153.00
IUUC-Ome-081438	Oryza meridionalis	74.71	2.00e-31	127.00
IUUC-Oni-082553	Oryza nivara	67.63	2.00e-30	124.00
IUUC-Opu-083997	Oryza punctata	66.17	3.00e-32	130.00
IUUC-Oru-084390	Oryza rufipogon	85.45	3.00e-24	103.00
IUUC-Osa-085682	Oryza sativa	75.00	2.00e-39	154.00
IUUC-Ola-087358	Oryzias latipes	54.35	4.00e-12	65.90
IUUC-Psi-093301	Pelodiscus sinensis	45.31	1.00e-12	68.20
IUUC-Pop-099512	Populus trichocarpa	61.36	1.00e-30	125.00
IUUC-Ppe-101991	Prunus persica	52.31	7.00e-29	119.00
IUUC-Sit-110370	Setaria italica	76.70	3.00e-34	138.00
IUUC-Sly-111371	Solanum lycopersicum	58.65	9.00e-32	129.00
IUUC-Stu-112741	Solanum tuberosum	58.65	9.00e-32	129.00
IUUC-Ssc-116087	Sus scrofa	45.31	5.00e-14	70.10
IUUC-Tru-118502	Takifugu rubripes	52.17	3.00e-11	63.20
IUUC-Tsy-119210	Tarsius syrichta	45.31	1.00e-12	67.80
IUUC-Tae-123035	Triticum aestivum	68.57	9.00e-37	145.00
IUUC-Tur-126629	Triticum urartu	60.20	2.00e-27	113.00
IUUC-Vvi-131731	Vitis vinifera	61.54	3.00e-32	130.00
IUUC-Xtr-132280	Xenopus tropicalis	51.06	5.00e-11	62.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence