iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086970

UUCD1 version

UUC-OrL-01015

Ensembl Protein ID

ENSORLP00000025484.1

UniProt Accession

H2N215; H2N215_ORYLA

Protein Name

Uncharacterized protein

Gene Name

rnf4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000020573.1	ENSORLT00000025485.1	ENSORLP00000025484.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-07	30.7	138	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ +       + ++++ CgHvf+ +Cl       +s   + +CP+Cr
   Q: 138  CPVCLDLYseivgsGRLVVSTKCGHVFCSQCL------RDSLTSSHTCPTCR 183
           ******9966665544488899*********9......445899999****8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MSSSAQRKRR PTESPRVSRP SIKTSRVAQS RRAVNRGTHT GADSAPPAET IDVMDNTDDG 60
VEEVVDLTCE GAEAAVVDLT NNNDSVLLVD EDPQSSTVPA GESYVLSSDE DEDTPLFSSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTACCAGA CTCAGTTCTT CGGATAACAC TTTTGGAGTA AAATAAGAGG CCGAAAAGGC 60
GCCAAGCAGC AAACGACAGC AACATCAAAC GGTAAGAGTC GAGAAAGAGA TCACCGAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ola:101172393

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	40.98	2.00e-11	62.40
IUUC-Aml-002206	Ailuropoda melanoleuca	43.81	2.00e-31	128.00
IUUC-Atr-002771	Amborella trichopoda	35.59	5.00e-10	57.80
IUUC-Apl-004120	Anas platyrhynchos	44.55	2.00e-35	141.00
IUUC-Aca-004236	Anolis carolinensis	47.42	6.00e-35	140.00
IUUC-Aly-005728	Arabidopsis lyrata	37.70	1.00e-10	58.90
IUUC-Ath-007366	Arabidopsis thaliana	37.70	2.00e-10	58.50
IUUC-Ame-011555	Astyanax mexicanus	60.26	9.00e-45	172.00
IUUC-Bta-012913	Bos taurus	40.84	5.00e-33	133.00
IUUC-Bdi-014655	Brachypodium distachyon	44.26	4.00e-11	61.60
IUUC-Bol-015811	Brassica oleracea	36.07	3.00e-10	58.20
IUUC-Bra-017153	Brassica rapa	36.07	3.00e-10	57.80
IUUC-Cja-019151	Callithrix jacchus	40.82	8.00e-29	119.00
IUUC-Cfa-020868	Canis familiaris	40.61	2.00e-28	118.00
IUUC-Cpo-022249	Cavia porcellus	41.21	2.00e-26	112.00
IUUC-Csa-024125	Chlorocebus sabaeus	43.56	2.00e-30	125.00
IUUC-Cin-025749	Ciona intestinalis	49.18	7.00e-15	73.90
IUUC-Csv-026318	Ciona savignyi	47.54	3.00e-14	71.60
IUUC-Dre-028145	Danio rerio	59.60	3.00e-41	160.00
IUUC-Dno-029605	Dasypus novemcinctus	43.30	5.00e-35	140.00
IUUC-Dor-030898	Dipodomys ordii	41.24	2.00e-31	128.00
IUUC-Dse-031284	Dothistroma septosporum	53.57	1.00e-09	56.60
IUUC-Dme-032177	Drosophila melanogaster	45.16	3.00e-13	68.90
IUUC-Ete-032694	Echinops telfairi	38.89	5.00e-29	120.00
IUUC-Eca-033443	Equus caballus	43.37	3.00e-31	127.00
IUUC-Eeu-034603	Erinaceus europaeus	66.67	2.00e-25	107.00
IUUC-Fca-035507	Felis catus	40.93	7.00e-30	122.00
IUUC-Fal-037382	Ficedula albicollis	51.32	3.00e-34	137.00
IUUC-Gmo-038960	Gadus morhua	79.59	3.00e-21	93.60
IUUC-Gga-040493	Gallus gallus	42.64	2.00e-34	138.00
IUUC-Gac-042194	Gasterosteus aculeatus	63.27	2.00e-58	218.00
IUUC-Gma-042666	Glycine max	25.00	6.00e-09	53.50
IUUC-Ggo-044726	Gorilla gorilla	41.84	3.00e-30	124.00
IUUC-Hsa-046212	Homo sapiens	41.84	3.00e-30	124.00
IUUC-Hvu-047630	Hordeum vulgare	40.98	2.00e-11	62.40
IUUC-Itr-047892	Ictidomys tridecemlineatus	38.58	2.00e-29	122.00
IUUC-Lpe-050920	Leersia perrieri	39.34	1.00e-10	59.30
IUUC-Loc-051907	Lepisosteus oculatus	58.28	2.00e-39	154.00
IUUC-Laf-054145	Loxodonta africana	40.67	3.00e-30	124.00
IUUC-Mcc-055689	Macaca mulatta	41.84	1.00e-29	122.00
IUUC-Meu-056654	Macropus eugenii	68.25	1.00e-25	108.00
IUUC-Mtr-058314	Medicago truncatula	42.86	1.00e-11	62.40
IUUC-Mga-059303	Meleagris gallopavo	45.50	1.00e-35	142.00
IUUC-Mmr-061355	Microcebus murinus	40.82	1.00e-29	122.00
IUUC-Mdo-062968	Monodelphis domestica	41.18	7.00e-32	129.00
IUUC-Mmu-064421	Mus musculus	41.75	1.00e-32	132.00
IUUC-Mac-064573	Musa acuminata	39.34	6.00e-11	61.20
IUUC-Mpu-066522	Mustela putorius furo	39.50	8.00e-31	126.00
IUUC-Mlu-067065	Myotis lucifugus	39.67	8.00e-30	122.00
IUUC-Nle-069198	Nomascus leucogenys	41.33	2.00e-29	121.00
IUUC-Opr-071141	Ochotona princeps	44.79	8.00e-33	132.00
IUUC-Oan-073341	Ornithorhynchus anatinus	33.33	8.00e-07	45.80
IUUC-Ocu-073787	Oryctolagus cuniculus	42.64	2.00e-34	138.00
IUUC-Oba-075460	Oryza barthii	40.98	1.00e-10	60.10
IUUC-Obr-076406	Oryza brachyantha	38.71	2.00e-11	62.80
IUUC-Ogl-077094	Oryza glaberrima	40.98	1.00e-10	60.10
IUUC-Ogu-078677	Oryza glumaepatula	40.98	1.00e-10	60.10
IUUC-Oin-079992	Oryza indica	40.98	1.00e-10	60.10
IUUC-Olo-080257	Oryza longistaminata	39.34	1.00e-10	59.70
IUUC-Ome-081943	Oryza meridionalis	40.98	1.00e-10	60.50
IUUC-Oni-082671	Oryza nivara	40.98	1.00e-10	60.10
IUUC-Opu-083644	Oryza punctata	40.98	1.00e-10	60.10
IUUC-Oru-084650	Oryza rufipogon	40.98	1.00e-10	60.10
IUUC-Osa-086110	Oryza sativa	40.98	1.00e-10	60.10
IUUC-Olu-087634	Ostreococcus lucimarinus	44.07	2.00e-10	58.20
IUUC-Oga-088242	Otolemur garnettii	42.27	5.00e-33	133.00
IUUC-Oar-089469	Ovis aries	43.22	5.00e-35	140.00
IUUC-Ptr-091254	Pan troglodytes	39.80	5.00e-27	113.00
IUUC-Pan-092919	Papio anubis	45.68	1.00e-29	122.00
IUUC-Psi-093929	Pelodiscus sinensis	42.45	3.00e-33	134.00
IUUC-Pma-094118	Petromyzon marinus	59.02	2.00e-19	86.70
IUUC-Ppa-095567	Physcomitrella patens	39.34	6.00e-11	60.80
IUUC-Pfo-097412	Poecilia formosa	72.45	8.00e-63	232.00
IUUC-Pab-098424	Pongo abelii	42.35	3.00e-30	124.00
IUUC-Pop-099483	Populus trichocarpa	38.71	2.00e-09	55.10
IUUC-Pca-100463	Procavia capensis	29.49	4.00e-05	40.80
IUUC-Ppe-102052	Prunus persica	48.48	2.00e-10	58.90
IUUC-Pva-102594	Pteropus vampyrus	34.67	1.00e-08	52.00
IUUC-Rno-105460	Rattus norvegicus	37.44	8.00e-30	122.00
IUUC-Sha-107487	Sarcophilus harrisii	41.09	1.00e-34	139.00
IUUC-Smo-108908	Selaginella moellendorffii	32.79	9.00e-08	50.10
IUUC-Sit-109959	Setaria italica	34.43	1.00e-04	40.40
IUUC-Stu-112694	Solanum tuberosum	39.68	3.00e-09	55.10
IUUC-Sar-113601	Sorex araneus	38.46	9.00e-29	119.00
IUUC-Sbi-114398	Sorghum bicolor	39.34	7.00e-06	43.90
IUUC-Ssc-115911	Sus scrofa	42.35	1.00e-30	125.00
IUUC-Tgu-117264	Taeniopygia guttata	51.68	3.00e-33	134.00
IUUC-Tru-117663	Takifugu rubripes	70.86	6.00e-51	192.00
IUUC-Tsy-118883	Tarsius syrichta	45.27	3.00e-29	120.00
IUUC-Tae-124872	Triticum aestivum	40.98	2.00e-11	62.80
IUUC-Tur-126408	Triticum urartu	40.98	2.00e-11	62.80
IUUC-Ttr-128950	Tursiops truncatus	66.67	3.00e-25	108.00
IUUC-Vvi-130833	Vitis vinifera	37.70	3.00e-10	58.50
IUUC-Xtr-132879	Xenopus tropicalis	53.38	7.00e-32	129.00
IUUC-Xma-133319	Xiphophorus maculatus	75.54	8.00e-51	191.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence