iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037312

Ensembl Protein ID

ENSFALP00000004982.1

UniProt Accession

U3JQC8; U3JQC8_FICAL

Genbank Protein ID

ENSFALP00000004982

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01001119

Gene Name

CHD4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000004785.1	ENSFALT00000005006.1	ENSFALP00000004982.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.50e-16	60.0	444	488

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e w Cp+C+
   Q: 444  EFCRVCKDGGE----LLCCDACPSSYHIHCLNPP-LPEIPNGE-WLCPRCT 488
           58*********....*******************.*******8.******6 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MASGIGSPSP CSGGSDDDEM EILLNNAIPQ HPEPEEEPEE ELLSEADTPK IKKKKKPKKL 60
KEPKVPKLSK RQKKELGDSS GEGNEFVEEE EEVLRSDSEG SDYTPGKKKK KKLGPKKEKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACTGGCCAG ACTGGCAAGA AGGCGACAAG CTGTGTAAGC CCGGGCCTCC CCCAGTGTGG 60
AGGACATGGC TTCGGGCATT GGGTCTCCAT CACCGTGCTC AGGGGGCAGT GATGATGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028725--CHD4
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0006355--P:regulation of transcription, DNA-templated
GO:0051225--P:spindle assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001361	Ailuropoda melanoleuca	90.06	0.00e+00	2308.00
IUUC-Apl-004175	Anas platyrhynchos	96.28	0.00e+00	2345.00
IUUC-Aca-004774	Anolis carolinensis	94.78	0.00e+00	2339.00
IUUC-Bta-013220	Bos taurus	93.69	0.00e+00	2311.00
IUUC-Cja-019510	Callithrix jacchus	86.97	0.00e+00	2026.00
IUUC-Cfa-020422	Canis familiaris	93.68	0.00e+00	2314.00
IUUC-Cpo-021704	Cavia porcellus	94.11	0.00e+00	2289.00
IUUC-Csa-023625	Chlorocebus sabaeus	93.11	0.00e+00	2319.00
IUUC-Cho-024361	Choloepus hoffmanni	87.32	0.00e+00	1400.00
IUUC-Csv-025847	Ciona savignyi	55.93	0.00e+00	1392.00
IUUC-Dno-029656	Dasypus novemcinctus	93.42	0.00e+00	2309.00
IUUC-Dor-030354	Dipodomys ordii	92.24	0.00e+00	1805.00
IUUC-Eca-034112	Equus caballus	93.11	0.00e+00	2309.00
IUUC-Eeu-034777	Erinaceus europaeus	69.52	0.00e+00	1702.00
IUUC-Fca-036056	Felis catus	93.68	0.00e+00	2315.00
IUUC-Gmo-038957	Gadus morhua	75.68	0.00e+00	1345.00
IUUC-Gga-040216	Gallus gallus	99.28	0.00e+00	2416.00
IUUC-Gma-043999	Glycine max	43.60	0.00e+00	722.00
IUUC-Hsa-045908	Homo sapiens	90.11	0.00e+00	2313.00
IUUC-Itr-048002	Ictidomys tridecemlineatus	93.68	0.00e+00	2314.00
IUUC-Lch-049948	Latimeria chalumnae	79.83	0.00e+00	1887.00
IUUC-Loc-052144	Lepisosteus oculatus	84.84	0.00e+00	2098.00
IUUC-Mcc-055773	Macaca mulatta	91.31	0.00e+00	2312.00
IUUC-Meu-056292	Macropus eugenii	64.88	0.00e+00	894.00
IUUC-Mga-059633	Meleagris gallopavo	98.89	0.00e+00	2400.00
IUUC-Mmr-060886	Microcebus murinus	90.75	0.00e+00	2308.00
IUUC-Mdo-062872	Monodelphis domestica	95.00	0.00e+00	2071.00
IUUC-Mmu-063672	Mus musculus	92.45	0.00e+00	2300.00
IUUC-Mpu-066692	Mustela putorius furo	93.75	0.00e+00	2315.00
IUUC-Mlu-067785	Myotis lucifugus	93.68	0.00e+00	2307.00
IUUC-Nle-070039	Nomascus leucogenys	92.05	0.00e+00	2270.00
IUUC-Ont-072418	Oreochromis niloticus	83.07	0.00e+00	2122.00
IUUC-Ocu-074177	Oryctolagus cuniculus	90.91	0.00e+00	2325.00
IUUC-Ola-086880	Oryzias latipes	82.09	0.00e+00	2157.00
IUUC-Oga-088970	Otolemur garnettii	91.96	0.00e+00	2310.00
IUUC-Oar-090422	Ovis aries	95.42	0.00e+00	2286.00
IUUC-Pan-092441	Papio anubis	93.11	0.00e+00	2319.00
IUUC-Psi-093530	Pelodiscus sinensis	95.30	0.00e+00	2373.00
IUUC-Ppa-095213	Physcomitrella patens	42.33	0.00e+00	717.00
IUUC-Pfo-097530	Poecilia formosa	82.73	0.00e+00	2097.00
IUUC-Pab-097959	Pongo abelii	91.36	0.00e+00	2239.00
IUUC-Pva-103186	Pteropus vampyrus	93.58	0.00e+00	2276.00
IUUC-Rno-105692	Rattus norvegicus	92.61	0.00e+00	2311.00
IUUC-Sly-110976	Solanum lycopersicum	43.54	0.00e+00	728.00
IUUC-Ssc-115295	Sus scrofa	93.68	0.00e+00	2313.00
IUUC-Tgu-117484	Taeniopygia guttata	99.35	0.00e+00	2447.00
IUUC-Tru-118745	Takifugu rubripes	81.57	0.00e+00	2104.00
IUUC-Tsy-119261	Tarsius syrichta	86.70	0.00e+00	1557.00
IUUC-Ttr-128478	Tursiops truncatus	93.05	0.00e+00	2256.00
IUUC-Vvi-130849	Vitis vinifera	42.94	0.00e+00	718.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence