iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ggo-044428

UUCD1 version

UUC-GoG-00978

Ensembl Protein ID

ENSGGOP00000018333.1

UniProt Accession

G3RRA9; G3RRA9_GORGO

Protein Name

Uncharacterized protein

Gene Name

CHD4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000001930.2	ENSGGOT00000023272.1	ENSGGOP00000018333.1
ENSGGOG00000001930.2	ENSGGOT00000001947.2	ENSGGOP00000001905.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.10e-16	59.7	424	468

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e w Cp+C+
   Q: 424  EFCRVCKDGGE----LLCCDTCPSSYHIHCLNPP-LPEIPNGE-WLCPRCT 468
           58*********....*******************.*******8.******6 PP

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MASGLGSPSP CSAGSEEEDM DALLNNSLPP PHPENEEDPE EDLSETETPK LKKKKKPKKP 60
RDPKIPKSKR QKKERMLLCR QLGDSSGEGP EFVEEEEEVA LRSDSEGSDY TPDDDDDDSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGACTCGGG CCAGTGTAGA GGGCCCCAGG CCGCCGGCAG GAGCAGCTGG GCCAATTCCC 60
TGGCCGGGAG CGGAAGGGGA TGGCGTCGGG CCTGGGCTCC CCGTCCCCCT GCTCGGCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028725--CHD4
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00249--PHD

Gene Ontology

GO:0005813--C:centrosome
GO:0005737--C:cytoplasm
GO:0016020--C:membrane
GO:0000790--C:nuclear chromatin
GO:0016581--C:NuRD complex
GO:0032993--C:protein-DNA complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0031492--F:nucleosomal DNA binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980--F:RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0006355--P:regulation of transcription, DNA-templated
GO:0051225--P:spindle assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001361	Ailuropoda melanoleuca	88.19	0.00e+00	2696.00
IUUC-Apl-004175	Anas platyrhynchos	83.32	0.00e+00	2407.00
IUUC-Aca-004774	Anolis carolinensis	80.79	0.00e+00	2506.00
IUUC-Bta-013220	Bos taurus	89.92	0.00e+00	2619.00
IUUC-Cja-019510	Callithrix jacchus	89.08	0.00e+00	2627.00
IUUC-Cfa-020422	Canis familiaris	90.60	0.00e+00	2674.00
IUUC-Cpo-021704	Cavia porcellus	89.42	0.00e+00	2609.00
IUUC-Csa-023625	Chlorocebus sabaeus	90.98	0.00e+00	2675.00
IUUC-Dre-027505	Danio rerio	71.78	0.00e+00	2173.00
IUUC-Dno-029656	Dasypus novemcinctus	89.87	0.00e+00	2633.00
IUUC-Dor-030354	Dipodomys ordii	83.32	0.00e+00	1593.00
IUUC-Eca-034112	Equus caballus	90.55	0.00e+00	2679.00
IUUC-Fca-036056	Felis catus	90.60	0.00e+00	2675.00
IUUC-Gga-040216	Gallus gallus	84.34	0.00e+00	2515.00
IUUC-Hsa-045908	Homo sapiens	89.40	0.00e+00	2690.00
IUUC-Itr-048002	Ictidomys tridecemlineatus	90.22	0.00e+00	2643.00
IUUC-Lch-049948	Latimeria chalumnae	68.20	0.00e+00	1633.00
IUUC-Mcc-055773	Macaca mulatta	89.24	0.00e+00	2671.00
IUUC-Mga-059633	Meleagris gallopavo	84.48	0.00e+00	2514.00
IUUC-Mmr-060886	Microcebus murinus	88.93	0.00e+00	2680.00
IUUC-Mdo-062872	Monodelphis domestica	86.40	0.00e+00	2325.00
IUUC-Mmu-063672	Mus musculus	89.28	0.00e+00	2578.00
IUUC-Mpu-066692	Mustela putorius furo	90.55	0.00e+00	2675.00
IUUC-Mlu-067785	Myotis lucifugus	90.18	0.00e+00	2660.00
IUUC-Nle-070039	Nomascus leucogenys	89.17	0.00e+00	2627.00
IUUC-Ocu-074177	Oryctolagus cuniculus	89.11	0.00e+00	2642.00
IUUC-Oga-088970	Otolemur garnettii	89.09	0.00e+00	2678.00
IUUC-Oar-090422	Ovis aries	89.59	0.00e+00	2567.00
IUUC-Pan-092441	Papio anubis	90.97	0.00e+00	2676.00
IUUC-Psi-093530	Pelodiscus sinensis	81.62	0.00e+00	2465.00
IUUC-Pfo-097530	Poecilia formosa	72.19	0.00e+00	1843.00
IUUC-Pab-097959	Pongo abelii	88.53	0.00e+00	2592.00
IUUC-Pva-103186	Pteropus vampyrus	88.53	0.00e+00	2588.00
IUUC-Rno-105692	Rattus norvegicus	88.53	0.00e+00	2585.00
IUUC-Ssc-115295	Sus scrofa	90.23	0.00e+00	2642.00
IUUC-Tgu-117484	Taeniopygia guttata	80.68	0.00e+00	2497.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence