iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mga-059716

Ensembl Protein ID

ENSMGAP00000018225.1

UniProt Accession

G3URC3; G3URC3_MELGA

Protein Name

Uncharacterized protein

Gene Name

LDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000012591.2	ENSMGAT00000019314.1	ENSMGAP00000019361.1
ENSMGAG00000012591.2	ENSMGAT00000014170.2	ENSMGAP00000013267.2
ENSMGAG00000012591.2	ENSMGAT00000018646.1	ENSMGAP00000018225.1
ENSMGAG00000012591.2	ENSMGAT00000018597.1	ENSMGAP00000017539.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	63.42	1.00e-120	429.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

MSSAPHDPFY SSPFGPFYRR HTPYMVQPEY RIYEMNKRLQ ARSEDSDNLW WDAFATEFFE 60
DDATLTLSFC LEDGPKRYTI GRTLIPRYFS TVFEGGVTDL YYILKHSKES YHNSSITVDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGTTGGC GGTACTCTGT GTCGCTTGAA CCTCCGCGAG CAGGCAAGAT GTCCAGCGCA 60
CCACATGACC CTTTCTATTC TTCTCCTTTT GGCCCGTTCT ACAGGAGGCA CACGCCGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0031252--C:cell leading edge
GO:0005730--C:nucleolus
GO:0005886--C:plasma membrane
GO:0005667--C:transcription factor complex
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0010669--P:epithelial structure maintenance
GO:0044089--P:positive regulation of cellular component biogenesis
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	23.84	1.00e-03	38.90
IUUC-Aml-002031	Ailuropoda melanoleuca	77.09	6.00e-152	530.00
IUUC-Atr-003083	Amborella trichopoda	20.36	1.00e-04	42.00
IUUC-Apl-004210	Anas platyrhynchos	79.58	2.00e-118	418.00
IUUC-Aca-005241	Anolis carolinensis	78.21	4.00e-154	536.00
IUUC-Aly-006204	Arabidopsis lyrata	24.56	2.00e-06	47.80
IUUC-Ath-007339	Arabidopsis thaliana	24.56	2.00e-06	47.80
IUUC-Ame-010910	Astyanax mexicanus	73.18	7.00e-149	519.00
IUUC-Bgr-012180	Blumeria graminis	22.61	5.00e-07	49.30
IUUC-Bta-012596	Bos taurus	95.42	0.00e+00	667.00
IUUC-Bci-013927	Botrytis cinerea	29.19	4.00e-09	56.60
IUUC-Bol-015721	Brassica oleracea	24.40	9.00e-07	48.50
IUUC-Bra-017183	Brassica rapa	24.40	8.00e-07	48.90
IUUC-Cel-018189	Caenorhabditis elegans	34.67	1.00e-29	124.00
IUUC-Cja-019586	Callithrix jacchus	96.51	0.00e+00	679.00
IUUC-Cfa-021188	Canis familiaris	77.09	1.00e-151	529.00
IUUC-Cpo-022350	Cavia porcellus	77.09	3.00e-150	524.00
IUUC-Csa-023816	Chlorocebus sabaeus	77.37	3.00e-152	530.00
IUUC-Cho-024958	Choloepus hoffmanni	78.64	3.00e-92	331.00
IUUC-Cin-025721	Ciona intestinalis	52.19	9.00e-94	336.00
IUUC-Csv-026065	Ciona savignyi	55.76	2.00e-97	348.00
IUUC-Dre-027356	Danio rerio	82.47	0.00e+00	634.00
IUUC-Dno-029918	Dasypus novemcinctus	77.20	2.00e-147	514.00
IUUC-Dor-030634	Dipodomys ordii	77.09	5.00e-152	530.00
IUUC-Dse-031245	Dothistroma septosporum	25.00	5.00e-04	39.70
IUUC-Dme-031667	Drosophila melanogaster	63.64	2.00e-125	442.00
IUUC-Ete-032246	Echinops telfairi	93.83	0.00e+00	651.00
IUUC-Eca-034015	Equus caballus	96.25	0.00e+00	679.00
IUUC-Eeu-034902	Erinaceus europaeus	77.09	5.00e-152	530.00
IUUC-Fca-035903	Felis catus	76.67	3.00e-150	524.00
IUUC-Fal-037407	Ficedula albicollis	98.92	0.00e+00	672.00
IUUC-Gmo-039466	Gadus morhua	74.37	4.00e-156	543.00
IUUC-Ggr-040030	Gaeumannomyces graminis	23.35	3.00e-05	43.90
IUUC-Gga-040214	Gallus gallus	78.65	9.00e-156	542.00
IUUC-Gac-042214	Gasterosteus aculeatus	74.24	3.00e-158	550.00
IUUC-Gma-042794	Glycine max	24.34	1.00e-08	55.50
IUUC-Ggo-044988	Gorilla gorilla	96.51	0.00e+00	685.00
IUUC-Hsa-046092	Homo sapiens	97.30	0.00e+00	687.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	77.09	9.00e-152	529.00
IUUC-Lch-049895	Latimeria chalumnae	89.16	3.00e-107	380.00
IUUC-Lpe-050806	Leersia perrieri	26.58	7.00e-05	42.40
IUUC-Loc-052845	Lepisosteus oculatus	75.63	5.00e-155	540.00
IUUC-Lma-053090	Leptosphaeria maculans	25.20	3.00e-06	47.00
IUUC-Laf-054538	Loxodonta africana	76.15	2.00e-154	537.00
IUUC-Mcc-055116	Macaca mulatta	97.29	1.00e-153	535.00
IUUC-Meu-056777	Macropus eugenii	71.79	2.00e-136	478.00
IUUC-Mpo-057376	Magnaporthe poae	23.70	4.00e-05	43.50
IUUC-Mtr-058142	Medicago truncatula	25.38	4.00e-08	53.50
IUUC-Mmr-060649	Microcebus murinus	95.98	0.00e+00	679.00
IUUC-Mdo-062535	Monodelphis domestica	97.32	0.00e+00	675.00
IUUC-Mmu-064036	Mus musculus	95.15	0.00e+00	681.00
IUUC-Mac-065338	Musa acuminata	24.31	6.00e-06	46.20
IUUC-Mpu-065719	Mustela putorius furo	77.09	9.00e-152	529.00
IUUC-Mlu-067219	Myotis lucifugus	76.39	1.00e-149	522.00
IUUC-Ncr-068691	Neurospora crassa	21.37	2.00e-04	41.20
IUUC-Nle-068983	Nomascus leucogenys	96.90	0.00e+00	646.00
IUUC-Opr-070467	Ochotona princeps	77.09	5.00e-152	530.00
IUUC-Ont-071566	Oreochromis niloticus	75.70	4.00e-159	553.00
IUUC-Oan-073368	Ornithorhynchus anatinus	77.65	2.00e-152	531.00
IUUC-Ocu-074854	Oryctolagus cuniculus	95.81	0.00e+00	649.00
IUUC-Ola-086364	Oryzias latipes	75.42	2.00e-158	551.00
IUUC-Oga-088235	Otolemur garnettii	95.98	0.00e+00	672.00
IUUC-Oar-089547	Ovis aries	77.09	6.00e-152	530.00
IUUC-Ptr-091423	Pan troglodytes	96.51	0.00e+00	679.00
IUUC-Pan-092378	Papio anubis	77.37	2.00e-152	531.00
IUUC-Psi-093638	Pelodiscus sinensis	97.32	0.00e+00	662.00
IUUC-Pma-094384	Petromyzon marinus	63.64	4.00e-55	206.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.59	3.00e-07	50.10
IUUC-Pfo-096031	Poecilia formosa	74.86	5.00e-160	556.00
IUUC-Pab-097886	Pongo abelii	96.90	0.00e+00	646.00
IUUC-Pop-099430	Populus trichocarpa	25.82	1.00e-06	48.10
IUUC-Pca-101138	Procavia capensis	77.09	5.00e-152	530.00
IUUC-Ppe-101293	Prunus persica	24.11	1.00e-07	51.20
IUUC-Pva-103215	Pteropus vampyrus	95.98	0.00e+00	681.00
IUUC-Pte-104238	Pyrenophora teres	29.49	8.00e-06	44.70
IUUC-Rno-105968	Rattus norvegicus	95.69	0.00e+00	686.00
IUUC-Sha-107595	Sarcophilus harrisii	76.82	9.00e-150	522.00
IUUC-Sja-107950	Schizosaccharomyces japonicus	17.83	5.00e-06	45.10
IUUC-Ssl-108527	Sclerotinia sclerotiorum	25.32	1.00e-06	48.10
IUUC-Smo-109552	Selaginella moellendorffii	20.08	6.00e-06	46.20
IUUC-Sly-110873	Solanum lycopersicum	26.09	4.00e-07	50.10
IUUC-Stu-112586	Solanum tuberosum	21.40	3.00e-06	47.00
IUUC-Sar-113076	Sorex araneus	89.52	4.00e-134	470.00
IUUC-Sre-115143	Sporisorium reilianum	23.81	1.10e-01	31.60
IUUC-Ssc-115755	Sus scrofa	77.53	2.00e-153	534.00
IUUC-Tgu-117326	Taeniopygia guttata	98.65	0.00e+00	669.00
IUUC-Tru-117858	Takifugu rubripes	84.88	0.00e+00	642.00
IUUC-Tsy-119296	Tarsius syrichta	89.81	7.00e-177	612.00
IUUC-Tni-119822	Tetraodon nigroviridis	74.50	1.00e-157	548.00
IUUC-Tca-120935	Theobroma cacao	25.38	4.00e-08	53.50
IUUC-Tbe-127366	Tupaia belangeri	76.26	1.00e-146	511.00
IUUC-Ttr-128484	Tursiops truncatus	85.79	9.00e-169	585.00
IUUC-Vpa-130304	Vicugna pacos	96.61	1.00e-152	531.00
IUUC-Vvi-131560	Vitis vinifera	23.01	6.00e-06	46.20
IUUC-Xtr-132062	Xenopus tropicalis	78.65	9.00e-156	542.00
IUUC-Xma-134288	Xiphophorus maculatus	75.98	6.00e-160	556.00
IUUC-Yli-134374	Yarrowia lipolytica	20.47	1.00e-03	37.70
IUUC-Zma-135310	Zea mays	24.61	7.00e-04	38.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence