iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036856

Ensembl Protein ID

ENSFALP00000000875.1

UniProt Accession

U3JDM1; U3JDM1_FICAL

Genbank Protein ID

ENSFALP00000000875

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000991

Gene Name

TNRC6C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000000848.1	ENSFALT00000000880.1	ENSFALP00000000875.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	37.28	2.00e-28	126.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MATGSAQGNF TGHTKKTNGN NGANGALVQS TSNQSALGAG GANGNGSSAR VWGVAAGSSS 60
GLAHCSASGG DGKMDNMMGD ARSQNCWGAS NSNAGINLNL NPNANPAAWP VLGHEGTVGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTACAG GGAGTGCCCA AGGCAACTTC ACTGGACATA CAAAGAAAAC TAATGGCAAT 60
AATGGCGCCA ACGGAGCACT CGTCCAAAGC ACTTCTAACC AGAGTGCCCT TGGAGCTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033499--TNRC6C
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF10427--Ago_hook
PF12938--M_domain
PF00076--RRM_1
PF16608--TNRC6-PABC_bdg
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation
GO:0060213--P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	42.56	0.00e+00	775.00
IUUC-Apl-003191	Anas platyrhynchos	92.73	0.00e+00	2400.00
IUUC-Aca-004717	Anolis carolinensis	90.84	0.00e+00	2336.00
IUUC-Acl-008209	Aspergillus clavatus	42.11	1.10e-01	32.30
IUUC-Ani-009386	Aspergillus nidulans	43.18	3.50e-02	33.90
IUUC-Ame-010681	Astyanax mexicanus	49.35	0.00e+00	813.00
IUUC-Bta-012915	Bos taurus	37.09	7.00e-102	366.00
IUUC-Cja-019614	Callithrix jacchus	83.37	0.00e+00	2060.00
IUUC-Cfa-020452	Canis familiaris	37.27	4.00e-111	397.00
IUUC-Cpo-021452	Cavia porcellus	81.70	0.00e+00	2157.00
IUUC-Csa-023169	Chlorocebus sabaeus	42.14	0.00e+00	761.00
IUUC-Cho-024655	Choloepus hoffmanni	41.88	1.00e-127	452.00
IUUC-Dre-028059	Danio rerio	55.72	0.00e+00	1070.00
IUUC-Dno-029734	Dasypus novemcinctus	41.07	0.00e+00	744.00
IUUC-Dor-030671	Dipodomys ordii	44.72	0.00e+00	680.00
IUUC-Dme-032014	Drosophila melanogaster	37.64	1.00e-28	122.00
IUUC-Ete-032774	Echinops telfairi	74.51	0.00e+00	1373.00
IUUC-Eca-033866	Equus caballus	83.84	0.00e+00	2076.00
IUUC-Eeu-034572	Erinaceus europaeus	62.28	3.00e-40	161.00
IUUC-Gga-040531	Gallus gallus	92.40	0.00e+00	2341.00
IUUC-Gac-041681	Gasterosteus aculeatus	51.23	0.00e+00	890.00
IUUC-Ggo-045143	Gorilla gorilla	83.43	0.00e+00	2110.00
IUUC-Hsa-045913	Homo sapiens	84.37	0.00e+00	2093.00
IUUC-Hvu-047206	Hordeum vulgare	34.55	3.40e-01	29.60
IUUC-Lch-049619	Latimeria chalumnae	43.12	0.00e+00	831.00
IUUC-Loc-052289	Lepisosteus oculatus	70.43	0.00e+00	1025.00
IUUC-Laf-053607	Loxodonta africana	84.03	0.00e+00	2164.00
IUUC-Mcc-055342	Macaca mulatta	84.42	0.00e+00	2047.00
IUUC-Meu-056275	Macropus eugenii	51.98	1.00e-104	375.00
IUUC-Mga-059241	Meleagris gallopavo	39.41	5.00e-129	456.00
IUUC-Mmr-061348	Microcebus murinus	36.98	3.00e-107	383.00
IUUC-Mdo-062155	Monodelphis domestica	83.59	0.00e+00	2217.00
IUUC-Mmu-064259	Mus musculus	42.36	1.00e-114	407.00
IUUC-Mpu-066534	Mustela putorius furo	54.68	9.00e-85	309.00
IUUC-Mlu-067834	Myotis lucifugus	42.77	0.00e+00	791.00
IUUC-Nle-069168	Nomascus leucogenys	41.75	0.00e+00	740.00
IUUC-Opr-070976	Ochotona princeps	36.24	2.00e-76	281.00
IUUC-Ocu-074534	Oryctolagus cuniculus	74.20	0.00e+00	680.00
IUUC-Oga-088116	Otolemur garnettii	41.93	0.00e+00	763.00
IUUC-Oar-090041	Ovis aries	36.94	2.00e-101	364.00
IUUC-Ptr-091135	Pan troglodytes	86.46	0.00e+00	2067.00
IUUC-Pan-092665	Papio anubis	86.69	0.00e+00	2057.00
IUUC-Psi-093057	Pelodiscus sinensis	87.05	0.00e+00	2239.00
IUUC-Pma-094508	Petromyzon marinus	37.62	3.00e-73	269.00
IUUC-Pfo-097115	Poecilia formosa	54.54	0.00e+00	656.00
IUUC-Pab-097935	Pongo abelii	42.03	0.00e+00	769.00
IUUC-Pca-100481	Procavia capensis	75.60	0.00e+00	892.00
IUUC-Pva-102376	Pteropus vampyrus	39.36	1.00e-75	279.00
IUUC-Rno-105508	Rattus norvegicus	38.39	6.00e-107	382.00
IUUC-Sar-113036	Sorex araneus	49.80	6.00e-42	166.00
IUUC-Sbi-114163	Sorghum bicolor	29.23	4.40e-01	30.00
IUUC-Ssc-115574	Sus scrofa	63.10	0.00e+00	1303.00
IUUC-Tgu-117233	Taeniopygia guttata	94.77	0.00e+00	2312.00
IUUC-Tru-117725	Takifugu rubripes	52.08	0.00e+00	941.00
IUUC-Tsy-118786	Tarsius syrichta	37.33	1.00e-69	258.00
IUUC-Tbe-127989	Tupaia belangeri	75.59	0.00e+00	813.00
IUUC-Ttr-128518	Tursiops truncatus	83.34	0.00e+00	2174.00
IUUC-Vpa-130230	Vicugna pacos	44.01	1.00e-76	282.00
IUUC-Xtr-132265	Xenopus tropicalis	73.18	0.00e+00	1820.00
IUUC-Xma-133981	Xiphophorus maculatus	58.24	0.00e+00	934.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence