iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006295

Ensembl Protein ID

fgenesh2_kg.4__207__AT2G22840.1

UniProt Accession

D7LE48; D7LE48_ARALL

Genbank Protein ID

EFH54897.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348716

Gene Name

AtGRF1; ARALYDRAFT_481147

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__207__AT2G22840.1	fgenesh2_kg.4__207__AT2G22840.1	fgenesh2_kg.4__207__AT2G22840.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	24.27	3.80e+00	31.20	IUUC-Hsa-045783

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDLGVRVSGH ENGSSPGQTE LGSGFSNKQE RSGFDGEDCW RSSKLSRTSS TGGFSSSSAS 60
AKTLSFHQGI PLLRSTTIDP RKGQEHMLSF SSTSDKSDVS PYLQYCRNSG YGLGGMMNAS 120

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Nucleotide Sequence
(Fasta)

AAGCGATTAC CTCCCATGGG AAAAATCTCT GAAGTGATTA TTTAGCACTT TTTTTTTTTT 60
TTTGTCTCCT TCTGAATCCA TTTTTATGGA TCTTGGAGTT CGTGTTTCGG GTCATGAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome

Interpro

IPR014978--Gln-Leu-Gln_QLQ
IPR031137--GRF
IPR014977--WRC_dom

PROSITE

PS51666--QLQ
PS51667--WRC

Pfam

PF08880--QLQ
PF08879--WRC

SMART

SM00951--QLQ

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0043565--F:sequence-specific DNA binding
GO:0019760--P:glucosinolate metabolic process
GO:0061062--P:regulation of nematode larval development
GO:0006355--P:regulation of transcription, DNA-templated
GO:0009624--P:response to nematode
GO:0048364--P:root development
GO:0006351--P:transcription, DNA-templated

KEGG

aly:ARALYDRAFT_481147

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002040	Ailuropoda melanoleuca	24.27	4.50e-02	31.20
IUUC-Apl-004008	Anas platyrhynchos	24.27	4.30e-02	31.20
IUUC-Aca-004631	Anolis carolinensis	23.30	1.90e-01	28.90
IUUC-Ame-010841	Astyanax mexicanus	24.27	4.10e-02	31.20
IUUC-Bta-012816	Bos taurus	24.27	3.50e-02	31.60
IUUC-Cja-019531	Callithrix jacchus	24.27	4.00e-02	31.20
IUUC-Cfa-020107	Canis familiaris	24.27	4.00e-02	31.20
IUUC-Cpo-021983	Cavia porcellus	24.27	3.40e-02	31.60
IUUC-Csa-023603	Chlorocebus sabaeus	24.27	4.00e-02	31.20
IUUC-Cin-025737	Ciona intestinalis	25.47	6.00e-03	34.30
IUUC-Csv-026238	Ciona savignyi	24.53	1.20e-01	30.00
IUUC-Dre-028699	Danio rerio	25.24	2.30e-02	32.00
IUUC-Dno-028959	Dasypus novemcinctus	24.27	3.60e-02	31.20
IUUC-Dor-030400	Dipodomys ordii	24.27	3.60e-02	31.20
IUUC-Eca-034017	Equus caballus	24.27	4.10e-02	31.20
IUUC-Eeu-035331	Erinaceus europaeus	24.27	4.50e-02	31.20
IUUC-Fca-035981	Felis catus	24.27	4.00e-02	31.20
IUUC-Gmo-038813	Gadus morhua	22.77	1.20e-01	29.60
IUUC-Gga-040286	Gallus gallus	24.27	4.70e-02	30.80
IUUC-Gac-041392	Gasterosteus aculeatus	24.75	5.70e-02	30.80
IUUC-Ggo-044990	Gorilla gorilla	24.27	4.00e-02	31.20
IUUC-Hsa-045783	Homo sapiens	24.27	3.70e-02	31.20
IUUC-Itr-048565	Ictidomys tridecemlineatus	24.27	3.70e-02	31.20
IUUC-Lch-049583	Latimeria chalumnae	25.24	2.70e-02	32.00
IUUC-Loc-052220	Lepisosteus oculatus	24.27	3.40e-02	31.60
IUUC-Laf-053976	Loxodonta africana	24.27	3.60e-02	31.20
IUUC-Mcc-055223	Macaca mulatta	24.27	4.00e-02	31.20
IUUC-Meu-056426	Macropus eugenii	24.27	3.90e-02	31.20
IUUC-Mga-059620	Meleagris gallopavo	24.27	4.70e-02	30.80
IUUC-Mmr-061373	Microcebus murinus	24.27	4.00e-02	31.20
IUUC-Mdo-063064	Monodelphis domestica	24.27	4.50e-02	31.20
IUUC-Mmu-064370	Mus musculus	24.27	3.40e-02	31.60
IUUC-Mpu-066516	Mustela putorius furo	24.27	5.00e-02	30.80
IUUC-Opr-070732	Ochotona princeps	24.27	3.30e-02	31.60
IUUC-Ont-071692	Oreochromis niloticus	24.75	2.80e-02	31.60
IUUC-Oan-072793	Ornithorhynchus anatinus	24.27	4.20e-02	31.60
IUUC-Ocu-074726	Oryctolagus cuniculus	24.27	2.80e-02	31.60
IUUC-Ola-086593	Oryzias latipes	24.66	2.50e-01	28.50
IUUC-Oga-089174	Otolemur garnettii	24.27	4.10e-02	31.20
IUUC-Oar-089518	Ovis aries	24.27	3.60e-02	31.20
IUUC-Ptr-090932	Pan troglodytes	24.27	4.00e-02	31.20
IUUC-Pan-091876	Papio anubis	24.27	4.00e-02	31.20
IUUC-Psi-093032	Pelodiscus sinensis	24.27	3.90e-02	31.20
IUUC-Pfo-096274	Poecilia formosa	24.75	3.10e-01	28.10
IUUC-Pab-097701	Pongo abelii	24.27	4.10e-02	30.80
IUUC-Pca-100140	Procavia capensis	24.27	4.20e-02	30.80
IUUC-Pva-102977	Pteropus vampyrus	24.27	4.00e-02	31.20
IUUC-Rno-105030	Rattus norvegicus	24.27	3.40e-02	31.60
IUUC-Sha-107161	Sarcophilus harrisii	24.27	3.50e-02	31.60
IUUC-Tru-118256	Takifugu rubripes	26.73	2.00e-03	35.40
IUUC-Tni-120305	Tetraodon nigroviridis	24.78	1.50e-02	32.70
IUUC-Tbe-127668	Tupaia belangeri	24.27	4.10e-02	30.80
IUUC-Xtr-132803	Xenopus tropicalis	23.30	8.50e-02	30.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence