iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000011791.8	ENSRNOT00000015742.6	ENSRNOP00000015742.4
ENSRNOG00000011791.8	ENSRNOT00000083563.1	ENSRNOP00000074111.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
ULD/UDP/UBQ/UBQ_Other	UBQ_Other	12905741

Classification

Family	E-value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	1.80e-15	57.0	54	128

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksg 75
           +++++++l+g+ ++l+v+p + V  +K ki++++gip  qq+Li  + +Ledd  L+dy++ +g+t+ l++ ++g
   Q: 54   MELFIETLTGTCFELRVSPFEAVISVKGKIQRLEGIPICQQHLIWNNMELEDDYCLNDYNISEGCTLKLVLAMRG 128
           789******************************************************************988776 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MFKADLGTIG IQLHTTYSRR IRKVKVMDNR KEPPFFNEDN VGPFYFKLPF YDPMELFIET 60
LTGTCFELRV SPFEAVISVK GKIQRLEGIP ICQQHLIWNN MELEDDYCLN DYNISEGCTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTACGCCCG CCTCAATTGC AGCCTGGTCA CACCCTCCAC GCTTCTCTGC CTACGGACTC 60
AGGACTCACA GACAAACCGG TCGCGCCCGT GGCTCCGGGT GCTGCTGACC GGACTTTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002390	Ailuropoda melanoleuca	86.25	3.00e-122	432.00
IUUC-Apl-003649	Anas platyrhynchos	79.92	2.00e-113	402.00
IUUC-Aca-004473	Anolis carolinensis	74.75	5.00e-91	328.00
IUUC-Ame-010845	Astyanax mexicanus	71.78	1.00e-87	317.00
IUUC-Bta-012480	Bos taurus	83.12	2.00e-116	413.00
IUUC-Cpo-022533	Cavia porcellus	88.72	4.00e-101	360.00
IUUC-Csa-023820	Chlorocebus sabaeus	76.82	3.00e-93	336.00
IUUC-Cho-024505	Choloepus hoffmanni	83.75	3.00e-117	416.00
IUUC-Cin-025250	Ciona intestinalis	63.01	3.00e-52	197.00
IUUC-Csv-025857	Ciona savignyi	60.40	8.00e-57	213.00
IUUC-Dre-027734	Danio rerio	71.36	8.00e-88	318.00
IUUC-Dor-030969	Dipodomys ordii	92.53	2.00e-96	346.00
IUUC-Ete-032468	Echinops telfairi	90.06	3.00e-93	336.00
IUUC-Eca-033298	Equus caballus	92.64	3.00e-142	497.00
IUUC-Eeu-035296	Erinaceus europaeus	86.97	3.00e-122	432.00
IUUC-Fal-037464	Ficedula albicollis	84.93	4.00e-115	409.00
IUUC-Gmo-039287	Gadus morhua	70.45	2.00e-90	326.00
IUUC-Gga-041142	Gallus gallus	88.13	2.00e-117	416.00
IUUC-Gac-041359	Gasterosteus aculeatus	71.95	4.00e-92	332.00
IUUC-Ggo-045168	Gorilla gorilla	78.18	6.00e-94	338.00
IUUC-Hsa-045966	Homo sapiens	78.18	7.00e-94	338.00
IUUC-Itr-049043	Ictidomys tridecemlineatus	87.71	5.00e-122	431.00
IUUC-Lch-050149	Latimeria chalumnae	82.38	4.00e-105	375.00
IUUC-Loc-052608	Lepisosteus oculatus	83.58	1.00e-96	347.00
IUUC-Mcc-055138	Macaca mulatta	79.09	5.00e-96	345.00
IUUC-Meu-056894	Macropus eugenii	92.73	3.00e-93	336.00
IUUC-Mga-059527	Meleagris gallopavo	79.66	5.00e-110	392.00
IUUC-Mmr-061033	Microcebus murinus	90.71	2.00e-122	432.00
IUUC-Mdo-062843	Monodelphis domestica	88.57	2.00e-131	462.00
IUUC-Mmu-063313	Mus musculus	91.19	7.00e-140	491.00
IUUC-Mpu-066305	Mustela putorius furo	69.04	3.00e-88	319.00
IUUC-Mlu-068214	Myotis lucifugus	85.17	5.00e-116	411.00
IUUC-Nle-069991	Nomascus leucogenys	78.64	2.00e-95	343.00
IUUC-Opr-070361	Ochotona princeps	74.57	1.00e-96	347.00
IUUC-Ont-072350	Oreochromis niloticus	72.53	9.00e-90	324.00
IUUC-Oan-073424	Ornithorhynchus anatinus	69.29	2.00e-51	194.00
IUUC-Ocu-073958	Oryctolagus cuniculus	79.26	2.00e-123	436.00
IUUC-Ola-087284	Oryzias latipes	67.62	3.00e-85	309.00
IUUC-Oga-088754	Otolemur garnettii	93.61	4.00e-125	442.00
IUUC-Oar-089571	Ovis aries	89.40	2.00e-107	383.00
IUUC-Ptr-090558	Pan troglodytes	79.09	1.00e-94	340.00
IUUC-Pan-092164	Papio anubis	78.18	6.00e-95	342.00
IUUC-Psi-094015	Pelodiscus sinensis	88.13	4.00e-116	412.00
IUUC-Pma-094348	Petromyzon marinus	65.49	4.00e-74	272.00
IUUC-Pfo-096743	Poecilia formosa	72.96	9.00e-94	337.00
IUUC-Pab-097914	Pongo abelii	79.55	1.00e-95	344.00
IUUC-Pca-100646	Procavia capensis	83.54	2.00e-115	409.00
IUUC-Sha-106931	Sarcophilus harrisii	84.58	2.00e-119	423.00
IUUC-Ssc-116312	Sus scrofa	93.15	3.00e-124	439.00
IUUC-Tgu-116536	Taeniopygia guttata	77.12	9.00e-110	390.00
IUUC-Tru-118746	Takifugu rubripes	66.67	5.00e-92	332.00
IUUC-Tsy-119588	Tarsius syrichta	83.41	4.00e-105	375.00
IUUC-Tni-120242	Tetraodon nigroviridis	68.64	3.00e-87	316.00
IUUC-Tbe-127677	Tupaia belangeri	83.55	1.00e-107	383.00
IUUC-Xtr-132911	Xenopus tropicalis	73.45	4.00e-97	349.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence