iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000006858.2	ENSCJAT00000013551.2	ENSCJAP00000012858.2
ENSCJAG00000006858.2	ENSCJAT00000013535.1	ENSCJAP00000012842.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.50e-18	67.7	177	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vC +Cg+g +++ +l+ C+ C++ +H  Cl ++  +++p+ + w CpkC +
   Q: 177  VCMFCGRGNNED-KLLLCDGCDDSYHTFCLIPP-LPDVPKGD-WRCPKCVA 224
           8*********88.6*******************.*******7.******75 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

FAFQIVASKG GFEMVTKEKK WSKVGSRLGY LPGKGTGSLL KSHYERILYP YELFQSGVSL 60
MGVQMPNLDL KDKVEPEVLS TDTHTSPEPG TRVNILPKRT RRVKSQSESG DVNRNTELKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGCTTTTC AGATTGTTGC CAGCAAAGGA GGTTTTGAAA TGGTCACCAA AGAGAAGAAA 60
TGGTCTAAAG TGGGTAGTCG CTTGGGATAT CTGCCAGGAA AAGGAACTGG GTCTCTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0019907--C:cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032993--C:protein-DNA complex
GO:0031490--F:chromatin DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003713--F:transcription coactivator activity
GO:0008270--F:zinc ion binding
GO:0032922--P:circadian regulation of gene expression
GO:0034720--P:histone H3-K4 demethylation
GO:1901726--P:negative regulation of histone deacetylase activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0045893--P:positive regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002061	Ailuropoda melanoleuca	96.38	0.00e+00	2759.00
IUUC-Apl-004141	Anas platyrhynchos	90.09	0.00e+00	2658.00
IUUC-Aca-004952	Anolis carolinensis	88.41	0.00e+00	2600.00
IUUC-Afl-008625	Aspergillus flavus	34.38	7.00e-109	389.00
IUUC-Aor-010155	Aspergillus oryzae	34.38	6.00e-109	389.00
IUUC-Ate-010453	Aspergillus terreus	29.42	2.00e-116	414.00
IUUC-Ame-011323	Astyanax mexicanus	75.27	0.00e+00	2046.00
IUUC-Bgr-012241	Blumeria graminis	29.46	1.00e-107	385.00
IUUC-Bta-012902	Bos taurus	95.63	0.00e+00	2764.00
IUUC-Cfa-020212	Canis familiaris	95.25	0.00e+00	2721.00
IUUC-Cpo-022221	Cavia porcellus	95.14	0.00e+00	2085.00
IUUC-Csa-023575	Chlorocebus sabaeus	98.42	0.00e+00	2683.00
IUUC-Cho-024280	Choloepus hoffmanni	90.57	0.00e+00	2516.00
IUUC-Cin-025321	Ciona intestinalis	48.93	0.00e+00	1078.00
IUUC-Dre-027909	Danio rerio	76.05	0.00e+00	1644.00
IUUC-Dno-029473	Dasypus novemcinctus	97.28	0.00e+00	2618.00
IUUC-Dor-030281	Dipodomys ordii	95.23	0.00e+00	1214.00
IUUC-Eca-034265	Equus caballus	95.75	0.00e+00	2768.00
IUUC-Fca-035476	Felis catus	95.32	0.00e+00	2754.00
IUUC-Fal-037078	Ficedula albicollis	91.79	0.00e+00	2291.00
IUUC-Ggr-039929	Gaeumannomyces graminis	30.33	9.00e-110	392.00
IUUC-Gga-040466	Gallus gallus	90.02	0.00e+00	2655.00
IUUC-Gac-042566	Gasterosteus aculeatus	75.20	0.00e+00	1935.00
IUUC-Ggo-044524	Gorilla gorilla	90.39	0.00e+00	2523.00
IUUC-Hsa-045821	Homo sapiens	96.75	0.00e+00	2773.00
IUUC-Kpa-049245	Komagataella pastoris	22.10	1.00e-26	116.00
IUUC-Lch-050630	Latimeria chalumnae	74.75	0.00e+00	1943.00
IUUC-Loc-051963	Lepisosteus oculatus	77.55	0.00e+00	1957.00
IUUC-Laf-053918	Loxodonta africana	90.13	0.00e+00	2363.00
IUUC-Mcc-055672	Macaca mulatta	98.25	0.00e+00	2828.00
IUUC-Meu-056374	Macropus eugenii	78.16	0.00e+00	1303.00
IUUC-Mor-057198	Magnaporthe oryzae	30.80	2.00e-119	424.00
IUUC-Mpo-057317	Magnaporthe poae	29.74	4.00e-110	393.00
IUUC-Mtr-058113	Medicago truncatula	31.97	4.00e-96	347.00
IUUC-Mga-059192	Meleagris gallopavo	80.77	0.00e+00	2282.00
IUUC-Mmr-060968	Microcebus murinus	97.06	0.00e+00	2843.00
IUUC-Mdo-062945	Monodelphis domestica	94.76	0.00e+00	2570.00
IUUC-Mmu-063614	Mus musculus	94.44	0.00e+00	2703.00
IUUC-Mpu-066349	Mustela putorius furo	96.05	0.00e+00	2633.00
IUUC-Mlu-067363	Myotis lucifugus	95.88	0.00e+00	2815.00
IUUC-Ncr-068763	Neurospora crassa	29.05	1.00e-103	372.00
IUUC-Nle-070142	Nomascus leucogenys	96.75	0.00e+00	2769.00
IUUC-Ont-072471	Oreochromis niloticus	77.84	0.00e+00	1874.00
IUUC-Oan-072797	Ornithorhynchus anatinus	77.86	0.00e+00	1793.00
IUUC-Ocu-074164	Oryctolagus cuniculus	94.94	0.00e+00	2818.00
IUUC-Ola-087076	Oryzias latipes	74.08	0.00e+00	1913.00
IUUC-Oga-088350	Otolemur garnettii	96.13	0.00e+00	2781.00
IUUC-Oar-090045	Ovis aries	95.57	0.00e+00	2766.00
IUUC-Ptr-091199	Pan troglodytes	96.31	0.00e+00	2761.00
IUUC-Pan-092094	Papio anubis	92.02	0.00e+00	2684.00
IUUC-Psi-093550	Pelodiscus sinensis	89.09	0.00e+00	2563.00
IUUC-Ppa-095839	Physcomitrella patens	35.20	6.00e-16	81.30
IUUC-Pfo-097266	Poecilia formosa	74.34	0.00e+00	1923.00
IUUC-Pab-098576	Pongo abelii	96.94	0.00e+00	2767.00
IUUC-Pca-100123	Procavia capensis	93.76	0.00e+00	1649.00
IUUC-Ppe-101504	Prunus persica	32.53	3.00e-103	370.00
IUUC-Pva-103109	Pteropus vampyrus	90.01	0.00e+00	2598.00
IUUC-Pte-104195	Pyrenophora teres	30.14	3.00e-122	434.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	30.24	4.00e-124	440.00
IUUC-Rno-105664	Rattus norvegicus	94.32	0.00e+00	2701.00
IUUC-Sha-107506	Sarcophilus harrisii	92.43	0.00e+00	2527.00
IUUC-Sja-107734	Schizosaccharomyces japonicus	21.19	3.00e-35	144.00
IUUC-Spo-108283	Schizosaccharomyces pombe	23.00	4.00e-53	204.00
IUUC-Smo-108843	Selaginella moellendorffii	52.08	1.00e-10	62.40
IUUC-Sit-110534	Setaria italica	31.86	2.00e-105	378.00
IUUC-Sly-111298	Solanum lycopersicum	31.86	2.00e-103	371.00
IUUC-Sar-113052	Sorex araneus	94.82	0.00e+00	2748.00
IUUC-Sbi-114173	Sorghum bicolor	58.14	8.00e-12	64.70
IUUC-Tgu-116613	Taeniopygia guttata	88.96	0.00e+00	2591.00
IUUC-Tru-118604	Takifugu rubripes	74.46	0.00e+00	1965.00
IUUC-Tsy-119237	Tarsius syrichta	98.53	0.00e+00	1316.00
IUUC-Tni-120779	Tetraodon nigroviridis	74.44	0.00e+00	1947.00
IUUC-Tca-121478	Theobroma cacao	32.39	1.00e-106	382.00
IUUC-Tvi-122263	Trichoderma virens	31.31	1.00e-98	355.00
IUUC-Tme-127087	Tuber melanosporum	30.87	6.00e-132	466.00
IUUC-Tbe-127627	Tupaia belangeri	98.99	0.00e+00	808.00
IUUC-Ttr-129242	Tursiops truncatus	93.69	0.00e+00	2661.00
IUUC-Vda-129733	Verticillium dahliae	29.75	1.00e-105	378.00
IUUC-Vpa-130429	Vicugna pacos	89.86	0.00e+00	1337.00
IUUC-Xtr-131762	Xenopus tropicalis	82.17	0.00e+00	2137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence