iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001616

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01163346

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000007191.1	ENSAMET00000007903.1	ENSAMEP00000007585.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	2.10e-16	59.6	215	262

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP  +k++L+++++
   Q: 215  MEKIW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVTIKSHLKSFSM 262
           67899.**********************888...***************976 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

EVSWGQRAGG LVTPGTLRGA AGGGEGGRGP RARERMGTQG SPVKSYDYLL KFLLVGDSDV 60
GKGEILESLQ DGAAESPYAY SNGIDYKTTT ILLDGRRVKL ELWDTSGQGR FCTIFRSYSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGTGTCGT GGGGGCAGAG GGCAGGGGGG CTGGTGACTC CGGGTACTCT GCGGGGAGCG 60
GCGGGGGGGG GGGAGGGGNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003799	Anas platyrhynchos	90.64	9.00e-125	438.00
IUUC-Aca-005004	Anolis carolinensis	82.29	4.00e-131	460.00
IUUC-Ame-011203	Astyanax mexicanus	95.20	7.00e-155	539.00
IUUC-Bta-013490	Bos taurus	98.52	3.00e-145	507.00
IUUC-Cja-019990	Callithrix jacchus	97.43	2.00e-143	501.00
IUUC-Cpo-022437	Cavia porcellus	98.90	1.00e-143	502.00
IUUC-Csa-024147	Chlorocebus sabaeus	98.15	1.00e-144	505.00
IUUC-Dre-027427	Danio rerio	96.31	3.00e-156	543.00
IUUC-Dno-029998	Dasypus novemcinctus	90.71	3.00e-109	390.00
IUUC-Dor-030584	Dipodomys ordii	88.79	2.00e-103	367.00
IUUC-Dme-031810	Drosophila melanogaster	69.20	3.00e-95	340.00
IUUC-Ete-033080	Echinops telfairi	97.89	3.00e-140	490.00
IUUC-Eca-033423	Equus caballus	98.21	7.00e-121	426.00
IUUC-Eeu-034590	Erinaceus europaeus	88.79	1.00e-105	375.00
IUUC-Fca-035697	Felis catus	99.11	1.00e-117	415.00
IUUC-Fal-037070	Ficedula albicollis	98.15	9.00e-145	505.00
IUUC-Gmo-039605	Gadus morhua	94.46	3.00e-154	537.00
IUUC-Gga-040343	Gallus gallus	98.15	9.00e-145	505.00
IUUC-Gac-041833	Gasterosteus aculeatus	90.48	1.00e-144	505.00
IUUC-Ggo-045131	Gorilla gorilla	90.41	2.00e-127	448.00
IUUC-Hsa-046237	Homo sapiens	98.15	1.00e-144	505.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	99.26	3.00e-145	507.00
IUUC-Lch-050193	Latimeria chalumnae	95.22	3.00e-155	540.00
IUUC-Loc-052243	Lepisosteus oculatus	96.32	9.00e-157	545.00
IUUC-Laf-054435	Loxodonta africana	95.94	4.00e-144	503.00
IUUC-Mcc-055337	Macaca mulatta	97.79	8.00e-144	502.00
IUUC-Meu-056731	Macropus eugenii	96.18	3.00e-74	271.00
IUUC-Mga-059204	Meleagris gallopavo	81.99	2.00e-136	477.00
IUUC-Mmr-061380	Microcebus murinus	98.88	4.00e-144	503.00
IUUC-Mdo-062438	Monodelphis domestica	97.79	6.00e-145	506.00
IUUC-Mmu-064046	Mus musculus	98.89	3.00e-145	507.00
IUUC-Mpu-066029	Mustela putorius furo	94.64	4.00e-119	420.00
IUUC-Mlu-067741	Myotis lucifugus	98.16	3.00e-145	507.00
IUUC-Nle-069240	Nomascus leucogenys	91.88	2.00e-131	461.00
IUUC-Opr-070662	Ochotona princeps	75.65	1.00e-126	445.00
IUUC-Ont-071248	Oreochromis niloticus	95.94	2.00e-155	541.00
IUUC-Oan-073432	Ornithorhynchus anatinus	96.88	5.00e-117	413.00
IUUC-Ocu-074559	Oryctolagus cuniculus	77.86	3.00e-125	440.00
IUUC-Olo-080270	Oryza longistaminata	34.41	6.00e-12	65.10
IUUC-Ola-086486	Oryzias latipes	88.81	5.00e-144	503.00
IUUC-Oga-088293	Otolemur garnettii	98.89	3.00e-145	507.00
IUUC-Ptr-090720	Pan troglodytes	98.15	1.00e-144	505.00
IUUC-Pan-091732	Papio anubis	98.15	1.00e-144	505.00
IUUC-Psi-093627	Pelodiscus sinensis	98.31	1.00e-140	492.00
IUUC-Pma-094679	Petromyzon marinus	79.04	3.00e-107	380.00
IUUC-Pfo-097105	Poecilia formosa	94.83	4.00e-154	536.00
IUUC-Pab-098054	Pongo abelii	98.15	1.00e-144	505.00
IUUC-Pca-100775	Procavia capensis	98.66	1.00e-87	315.00
IUUC-Pva-102658	Pteropus vampyrus	97.79	5.00e-144	503.00
IUUC-Rno-105303	Rattus norvegicus	98.89	3.00e-145	507.00
IUUC-Sha-106536	Sarcophilus harrisii	97.79	6.00e-145	506.00
IUUC-Sar-113518	Sorex araneus	75.20	2.00e-113	401.00
IUUC-Ssc-115719	Sus scrofa	75.09	6.00e-127	446.00
IUUC-Tgu-116858	Taeniopygia guttata	98.96	5.00e-113	399.00
IUUC-Tru-117605	Takifugu rubripes	88.42	2.00e-133	468.00
IUUC-Tni-120350	Tetraodon nigroviridis	95.20	2.00e-154	537.00
IUUC-Ttr-129236	Tursiops truncatus	98.15	1.00e-146	511.00
IUUC-Xtr-132079	Xenopus tropicalis	81.25	5.00e-137	479.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence