iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__1190__AT1G69330.1	fgenesh2_kg.2__1190__AT1G69330.1	fgenesh2_kg.2__1190__AT1G69330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	29.7	45	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl....qkwpglknssskefr......CPlCr 46
           C+iC+e+f   ++ p+vl CgH+ +++C+     ++ ++   ss+ +r      CP+C+
   Q: 45   CPICWESFnivENVPYVLWCGHTLCQNCVfglqSAV-LRL--SSQDIRipffvsCPWCQ 100
           ********999999**************75554333.333..333333445555****7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MWGFASNVIG SMGLKKSPKD PAQASSQCSD DEVSNVSRDE EGLECPICWE SFNIVENVPY 60
VLWCGHTLCQ NCVFGLQSAV LRLSSQDIRI PFFVSCPWCQ LLSFRIVYKG NLKFPRKNFF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACGGCGGAT CAACGAGAGA GAGAAAAAGA GAGAGGCTTT ATTCTTCTTC TTCCTCTCTT 60
CCCCGTTTCG ATATCTTCTT CAATACATCT GCGTATCTGA TTTGAAAGAT TTAACGGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_476060

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007395	Arabidopsis thaliana	94.07	1.00e-128	451.00
IUUC-Bol-016461	Brassica oleracea	69.03	3.00e-72	263.00
IUUC-Bra-017972	Brassica rapa	67.42	7.00e-75	272.00
IUUC-Gma-044330	Glycine max	63.77	9.00e-85	305.00
IUUC-Loc-051895	Lepisosteus oculatus	33.33	3.00e-08	50.40
IUUC-Mtr-058453	Medicago truncatula	58.94	6.00e-71	259.00
IUUC-Mdo-062993	Monodelphis domestica	33.82	2.00e-07	48.10
IUUC-Ptr-090580	Pan troglodytes	30.00	3.00e-05	41.20
IUUC-Sly-111188	Solanum lycopersicum	53.56	1.00e-70	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence