iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cfa-020995

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03010804

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000004835.3	ENSCAFT00000007815.3	ENSCAFP00000007243.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-09	37.5	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f++++++lpC+H  +++C + +                ss ++frCP Cr
   Q: 26   CPICLEMFSKPVVILPCQHNLCRKCANDVfqasnplwqsrGSTTVSSGGRFRCPSCR 82
           *************************87777777888899977777899********8 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MNFTVGFKPL LGDAHSMDNL EKQLICPICL EMFSKPVVIL PCQHNLCRKC ANDVFQASNP 60
LWQSRGSTTV SSGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESSRPLHSKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTTCATGG ACCAGATTCC CACACTTTCT CAGAGGCATG CTCATGAGGT CGTTCCAGGC 60
CCTGGGGCAG CTGCCAGCTC TAGCGCCCTT AGCTTCTTTT CCTAGGGTGA TACAAGAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR033492--TRIM54
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005874--C:microtubule
GO:0005875--C:microtubule associated complex
GO:0008270--F:zinc ion binding
GO:0055001--P:muscle cell development
GO:0007026--P:negative regulation of microtubule depolymerization

KEGG

cfa:475701

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002282	Ailuropoda melanoleuca	98.91	4.00e-135	473.00
IUUC-Bta-013385	Bos taurus	95.63	6.00e-179	619.00
IUUC-Cja-019697	Callithrix jacchus	78.89	9.00e-141	493.00
IUUC-Cpo-021913	Cavia porcellus	96.15	0.00e+00	680.00
IUUC-Cre-022560	Chlamydomonas reinhardtii	44.44	1.00e-05	45.80
IUUC-Csa-023342	Chlorocebus sabaeus	98.33	0.00e+00	656.00
IUUC-Cin-025224	Ciona intestinalis	51.78	1.00e-93	337.00
IUUC-Csv-026374	Ciona savignyi	52.33	1.00e-81	296.00
IUUC-Dre-027562	Danio rerio	68.91	8.00e-145	506.00
IUUC-Dno-029582	Dasypus novemcinctus	97.57	3.00e-170	591.00
IUUC-Dor-031139	Dipodomys ordii	94.74	0.00e+00	643.00
IUUC-Ete-032346	Echinops telfairi	99.51	2.00e-109	388.00
IUUC-Eca-033645	Equus caballus	98.80	7.00e-180	622.00
IUUC-Eeu-035333	Erinaceus europaeus	68.82	5.00e-115	407.00
IUUC-Fca-035865	Felis catus	98.79	0.00e+00	634.00
IUUC-Fal-036978	Ficedula albicollis	73.54	2.00e-167	581.00
IUUC-Gga-040452	Gallus gallus	77.32	3.00e-163	567.00
IUUC-Ggo-044467	Gorilla gorilla	86.82	6.00e-174	603.00
IUUC-Hsa-046379	Homo sapiens	96.67	3.00e-179	620.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	96.17	0.00e+00	640.00
IUUC-Lch-050029	Latimeria chalumnae	78.35	3.00e-153	534.00
IUUC-Loc-051801	Lepisosteus oculatus	80.28	2.00e-135	474.00
IUUC-Laf-054215	Loxodonta africana	97.25	0.00e+00	676.00
IUUC-Mcc-055027	Macaca mulatta	88.31	0.00e+00	639.00
IUUC-Meu-056412	Macropus eugenii	95.22	1.00e-167	582.00
IUUC-Mmr-060920	Microcebus murinus	97.22	0.00e+00	663.00
IUUC-Mdo-062832	Monodelphis domestica	96.66	7.00e-165	573.00
IUUC-Mmu-063707	Mus musculus	94.54	8.00e-180	622.00
IUUC-Mpu-066375	Mustela putorius furo	81.49	3.00e-108	384.00
IUUC-Mlu-067653	Myotis lucifugus	80.92	3.00e-137	481.00
IUUC-Nle-069020	Nomascus leucogenys	97.78	0.00e+00	647.00
IUUC-Opr-070577	Ochotona princeps	78.44	2.00e-142	498.00
IUUC-Ont-072491	Oreochromis niloticus	62.54	6.00e-121	427.00
IUUC-Oan-073101	Ornithorhynchus anatinus	91.01	9.00e-174	602.00
IUUC-Ocu-074454	Oryctolagus cuniculus	95.34	0.00e+00	633.00
IUUC-Oga-088361	Otolemur garnettii	97.43	5.00e-176	610.00
IUUC-Oar-089950	Ovis aries	80.33	3.00e-141	494.00
IUUC-Ptr-090785	Pan troglodytes	86.57	2.00e-173	601.00
IUUC-Pan-092344	Papio anubis	98.61	0.00e+00	659.00
IUUC-Pab-098322	Pongo abelii	94.44	5.00e-177	613.00
IUUC-Pca-100385	Procavia capensis	76.73	5.00e-123	433.00
IUUC-Rno-105134	Rattus norvegicus	95.03	0.00e+00	682.00
IUUC-Sha-106768	Sarcophilus harrisii	96.35	3.00e-178	617.00
IUUC-Tgu-117494	Taeniopygia guttata	80.43	2.00e-158	551.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence