iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cin-025451

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EAAA01002146

Gene Name

zf(mynd)-3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCING00000012223.2	ENSCINT00000023173.2	ENSCINP00000022927.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.10e-95	318.3	364	989

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgye 88
           tGl NlgNtC+mNSv+Q+L+n+pelr+++l+ k++ ++n +np +  g+++k++  ++++lw +++ka+sp+e+ ++++ + ++f+  +
   Q: 364  TGLINLGNTCFMNSVIQALANTPELRNYFLDeKFHCHINTKNPLGVGGKMAKAFYVVMRKLWGCSNKAFSPHEFRDVVGLKGSRFTDGM 452
           7******************************99999***************************************************** PP
   S: 89   qqDaqEflaflldqleeelkk....eknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldls 173
           q+Da+Ef+aflld l+e+l+      + +p++e ++ +++ +  ea+++  +++ s+i ++F+g lksq+kcl c+++s++++pfl ls
   Q: 453  QHDAHEFMAFLLDMLHEDLNTarnsTSIQPTSEVKGISEEMMAFEAWKSYISRSGSFIIENFHGLLKSQLKCLVCKTKSVKFDPFLFLS 541
           *******************77555566677778888888888888******************************************** PP
   S: 174  lpvpgkeetkke............................................................................. 185
           +p+p+k +                                                                                 
   Q: 542  VPLPKKVQPFSVfffrkdvsepikitvsvhsdgakmsdvlsqvgihtgtninhlvsyevnnnalcrffvptspltrtshtstvhiqeml 630
           ****99976544***************************************************************************** PP
   S: 186  ......................................................................................... 185
                                                                                                    
   Q: 631  spekegepvlqiictqrkmvpdinkhcayckrepdnsfelkrcmnclkvaycdrdcqkggwlkhknvcrrtpelvghpfvmciakskat 719
           ***************************************************************************************** PP
   S: 186  ......................................................................................... 185
                                                                                                    
   Q: 720  ytnvkslavkwaklssdveilsssmdgenangehsvsempmelrfsswkenknevypviedkgeelldfssrkfvsilwqndkskknyv 808
           ***************************************************************************************** PP
   S: 186  ..........................slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrek 248
                                     +l +cL+ ft++e l++++++yc++ckk+++a kk++l+ lP+vLi++LkRfsf+++ +++ k
   Q: 809  kvsdkaqdfsapgrtidlakksspkyDLLECLSLFTEPEILTQDEAWYCPQCKKHRQAMKKMSLWDLPDVLIIQLKRFSFKNYLWRD-K 896
           ***********************************************************************************8886.* PP
   S: 249  inkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvknekgk........WllfdDskVtevkeeevleetgs 328
           in  +++p + +d++++c++p++++  +  Y+L+av++H+G++ +GHY++ v+  + +        W l+dD +Vt+++ + v e    
   Q: 897  INMFIDLPVSnFDMTSYCNNPKTSK--SLCYDLFAVINHHGGILGGHYTTNVRLPDVNntsesvvdWRLCDDRHVTKLNNKVVTE---- 979
           ********999***********998..9*************************9443344467899************8666655.... PP
   S: 329  taYvlfYkrr 338
            aYv+fY+rr
   Q: 980  AAYVMFYHRR 989
           9******985 PP

Organism

Ciona intestinalis

Protein Sequence
(Fasta)

MPEANKNCAN VVASLLLKRG NTTMARKRKT DGLPINSLVR MSWSQRFHDV YMILWKINDD 60
LNLDEVDILL TDCTCSIKLP NGESHFWHFF LDVESAMSQR IPSSNAIIIV MPKKDHTVFW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGCCACCG CCAACGGCAT GTTCTCTCCA TTCTAAATGA AAGTGCGCCA TTTCAGCGAT 60
TTTGTTTGTC ACGACTCTGA ATATGAAATA ACTAATTATC GGTGTTACTT GCAATAACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008978--HSP20-like_chaperone
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001999	Ailuropoda melanoleuca	43.15	3.00e-86	312.00
IUUC-Apl-003368	Anas platyrhynchos	41.16	6.00e-80	291.00
IUUC-Aca-004267	Anolis carolinensis	42.12	1.00e-79	290.00
IUUC-Ame-010970	Astyanax mexicanus	41.60	3.00e-79	289.00
IUUC-Bta-012905	Bos taurus	43.93	4.00e-87	315.00
IUUC-Cel-018257	Caenorhabditis elegans	31.42	2.00e-89	322.00
IUUC-Cja-018789	Callithrix jacchus	42.89	9.00e-86	311.00
IUUC-Cfa-021004	Canis familiaris	43.41	4.00e-86	312.00
IUUC-Cpo-021529	Cavia porcellus	43.54	2.00e-86	313.00
IUUC-Csa-024035	Chlorocebus sabaeus	43.41	4.00e-86	311.00
IUUC-Cho-025036	Choloepus hoffmanni	47.18	5.00e-61	228.00
IUUC-Csv-025931	Ciona savignyi	66.97	7.00e-122	429.00
IUUC-Dre-028556	Danio rerio	38.66	2.00e-81	296.00
IUUC-Dno-029240	Dasypus novemcinctus	41.34	6.00e-76	279.00
IUUC-Dor-030495	Dipodomys ordii	46.30	3.00e-58	219.00
IUUC-Ete-032741	Echinops telfairi	43.15	6.00e-81	295.00
IUUC-Eca-033661	Equus caballus	43.41	8.00e-87	314.00
IUUC-Eeu-034648	Erinaceus europaeus	44.67	4.00e-52	199.00
IUUC-Fca-035646	Felis catus	43.67	9.00e-87	314.00
IUUC-Fal-037094	Ficedula albicollis	42.63	5.00e-84	305.00
IUUC-Gmo-038869	Gadus morhua	39.39	2.00e-73	270.00
IUUC-Gga-041170	Gallus gallus	41.42	3.00e-81	296.00
IUUC-Gac-041901	Gasterosteus aculeatus	40.47	8.00e-78	284.00
IUUC-Ggo-044708	Gorilla gorilla	43.15	6.00e-85	308.00
IUUC-Hsa-046791	Homo sapiens	43.41	1.00e-85	310.00
IUUC-Itr-048892	Ictidomys tridecemlineatus	43.67	1.00e-82	300.00
IUUC-Lch-050456	Latimeria chalumnae	38.60	1.00e-70	260.00
IUUC-Loc-052861	Lepisosteus oculatus	41.11	1.00e-70	260.00
IUUC-Laf-053788	Loxodonta africana	43.15	5.00e-86	311.00
IUUC-Mcc-055693	Macaca mulatta	43.41	3.00e-86	312.00
IUUC-Meu-055921	Macropus eugenii	42.78	3.00e-81	295.00
IUUC-Mga-059879	Meleagris gallopavo	40.99	3.00e-79	289.00
IUUC-Mmr-060802	Microcebus murinus	43.41	4.00e-86	312.00
IUUC-Mdo-061856	Monodelphis domestica	42.27	4.00e-80	292.00
IUUC-Mmu-063874	Mus musculus	43.67	3.00e-87	316.00
IUUC-Mpu-066166	Mustela putorius furo	43.41	1.00e-86	313.00
IUUC-Nle-070161	Nomascus leucogenys	43.15	7.00e-85	308.00
IUUC-Opr-071015	Ochotona princeps	42.89	4.00e-80	291.00
IUUC-Ont-072308	Oreochromis niloticus	41.95	7.00e-82	298.00
IUUC-Oan-072723	Ornithorhynchus anatinus	41.47	3.00e-77	282.00
IUUC-Ocu-073938	Oryctolagus cuniculus	43.41	1.00e-81	297.00
IUUC-Ola-086375	Oryzias latipes	43.16	1.00e-85	310.00
IUUC-Oga-088297	Otolemur garnettii	43.93	5.00e-87	315.00
IUUC-Oar-089675	Ovis aries	43.67	1.00e-85	310.00
IUUC-Ptr-091621	Pan troglodytes	43.15	8.00e-85	307.00
IUUC-Pan-092118	Papio anubis	43.41	4.00e-86	311.00
IUUC-Pma-094154	Petromyzon marinus	36.03	8.00e-61	226.00
IUUC-Pfo-097246	Poecilia formosa	41.69	3.00e-81	296.00
IUUC-Pab-098551	Pongo abelii	42.78	1.00e-83	303.00
IUUC-Pca-100158	Procavia capensis	43.41	3.00e-86	312.00
IUUC-Pva-103160	Pteropus vampyrus	43.15	3.00e-85	308.00
IUUC-Rno-105355	Rattus norvegicus	43.41	1.00e-86	314.00
IUUC-Sha-107057	Sarcophilus harrisii	42.78	5.00e-81	295.00
IUUC-Ssl-108506	Sclerotinia sclerotiorum	28.78	7.00e-13	67.80
IUUC-Sar-113011	Sorex araneus	42.64	1.00e-82	300.00
IUUC-Ssc-115761	Sus scrofa	43.67	5.00e-87	315.00
IUUC-Tgu-116956	Taeniopygia guttata	43.40	3.00e-55	208.00
IUUC-Tru-118739	Takifugu rubripes	42.22	1.00e-86	313.00
IUUC-Tsy-118827	Tarsius syrichta	49.78	7.00e-61	228.00
IUUC-Tni-119921	Tetraodon nigroviridis	40.53	3.00e-83	302.00
IUUC-Tbe-128017	Tupaia belangeri	40.83	1.00e-78	287.00
IUUC-Ttr-128869	Tursiops truncatus	42.89	3.00e-86	312.00
IUUC-Xtr-132734	Xenopus tropicalis	41.65	6.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence