iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114334

Ensembl Protein ID

Sb09g007890.1

UniProt Accession

A0A1B6P7B8; A0A1B6P7B8_SORBI

Genbank Protein ID

KXG21597.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G085100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g007890	Sb09g007890.1	Sb09g007890.1
Sb09g007890	Sb09g007890.2	Sb09g007890.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.30e-15	58.1	146	230

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 4    vkvsykgeirsfaldlekpgkfedLlkavrtlt...........elkn.sevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           vkvs++g+++++++dl+ + +++dL  a++++            e+++  e+ l+YeD+dGD++ l++D++++++ +      s+ rl+i+k
   Q: 146  VKVSMDGAPYLRKIDLKTYKNYKDLSTALEKMFsgfstgkdglsEYRKdGEYVLTYEDKDGDWM-LVGDVPWEMFAD------SCRRLRIMK 230
           9******************************3346667888888999889**************.************......*******98 PP

Organism

Sorghum bicolor

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MSPPLELDYI GLSPQPAAAA AAADADDDLK GTELRLGLPG SGSPDRRVAA ATATTLELLP 60
AKGAKRGFSD EAPPPSPAAA AGKGKKVAEE EDDDKKVAAT PQPAAKAQVV GWPPIRSYRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCTGTTCA CCTCTCAAAC AAAACCACTC TTCCCTCCGG CTCCCACTCC CACTCTTCGG 60
TCTTTCCCCT TCCGTTCCAC TCCCAGGCTC CCACTCTCCC CCTACCGGCT ACCCACACAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002452	Amborella trichopoda	70.19	5.00e-59	220.00
IUUC-Apl-003220	Anas platyrhynchos	25.00	6.00e-02	30.80
IUUC-Ame-010792	Astyanax mexicanus	23.33	1.20e+00	26.90
IUUC-Bta-012950	Bos taurus	25.00	4.20e-02	31.60
IUUC-Bol-015732	Brassica oleracea	50.38	3.00e-58	217.00
IUUC-Cel-018552	Caenorhabditis elegans	56.25	3.30e-01	26.90
IUUC-Cja-019530	Callithrix jacchus	25.00	3.60e-02	32.00
IUUC-Cfa-020019	Canis familiaris	25.00	4.50e-02	31.60
IUUC-Cpo-021749	Cavia porcellus	25.00	4.20e-02	31.60
IUUC-Csa-023127	Chlorocebus sabaeus	25.00	3.10e-02	31.60
IUUC-Dre-027850	Danio rerio	23.75	2.40e-01	29.30
IUUC-Dno-029244	Dasypus novemcinctus	25.00	4.70e-02	31.60
IUUC-Dor-030191	Dipodomys ordii	25.00	4.20e-02	31.60
IUUC-Eca-033719	Equus caballus	25.00	3.80e-02	32.00
IUUC-Eeu-035270	Erinaceus europaeus	25.00	1.70e-02	33.10
IUUC-Fca-035804	Felis catus	25.00	3.70e-02	32.00
IUUC-Fal-037426	Ficedula albicollis	23.91	1.10e-01	30.00
IUUC-Gmo-038472	Gadus morhua	23.16	1.40e-01	29.30
IUUC-Gga-040715	Gallus gallus	23.91	9.10e-02	30.40
IUUC-Gac-041966	Gasterosteus aculeatus	23.75	2.20e-01	28.50
IUUC-Gma-043506	Glycine max	51.16	7.00e-60	223.00
IUUC-Hsa-045687	Homo sapiens	25.00	3.90e-02	31.60
IUUC-Itr-048521	Ictidomys tridecemlineatus	25.00	3.60e-02	32.00
IUUC-Lch-049822	Latimeria chalumnae	23.91	9.70e-02	30.40
IUUC-Laf-053735	Loxodonta africana	25.00	3.80e-02	32.00
IUUC-Mcc-054955	Macaca mulatta	25.00	3.80e-02	32.00
IUUC-Mtr-058756	Medicago truncatula	55.42	3.00e-65	240.00
IUUC-Mmr-061160	Microcebus murinus	25.00	2.90e-02	32.00
IUUC-Mdo-062388	Monodelphis domestica	25.00	3.40e-02	32.00
IUUC-Mmu-063730	Mus musculus	25.00	4.30e-02	31.60
IUUC-Mac-064563	Musa acuminata	58.36	3.00e-76	277.00
IUUC-Mpu-065683	Mustela putorius furo	25.00	4.20e-02	31.60
IUUC-Mlu-067270	Myotis lucifugus	25.00	1.50e-02	33.10
IUUC-Nle-069491	Nomascus leucogenys	25.00	3.80e-02	32.00
IUUC-Opr-071160	Ochotona princeps	25.00	4.50e-02	31.60
IUUC-Oan-073255	Ornithorhynchus anatinus	25.00	3.10e-02	32.00
IUUC-Oba-075593	Oryza barthii	92.91	1.00e-67	247.00
IUUC-Ogu-078946	Oryza glumaepatula	93.53	5.00e-75	272.00
IUUC-Ome-081266	Oryza meridionalis	59.21	3.00e-48	184.00
IUUC-Opu-083799	Oryza punctata	75.70	3.00e-83	300.00
IUUC-Oga-088931	Otolemur garnettii	25.00	3.80e-02	32.00
IUUC-Oar-089653	Ovis aries	25.00	3.80e-02	32.00
IUUC-Ptr-091043	Pan troglodytes	25.00	3.90e-02	31.60
IUUC-Psi-093566	Pelodiscus sinensis	23.91	7.50e-02	30.80
IUUC-Pfo-096649	Poecilia formosa	23.75	2.70e-01	28.90
IUUC-Pab-098182	Pongo abelii	25.00	3.50e-02	32.00
IUUC-Pca-100634	Procavia capensis	35.00	2.70e+00	26.90
IUUC-Rno-105324	Rattus norvegicus	25.00	4.40e-02	31.60
IUUC-Sha-106837	Sarcophilus harrisii	25.00	3.20e-02	32.00
IUUC-Tgu-117454	Taeniopygia guttata	23.91	8.90e-02	30.40
IUUC-Tru-117548	Takifugu rubripes	22.83	2.10e-01	29.30
IUUC-Tsy-119108	Tarsius syrichta	25.00	3.70e-02	32.00
IUUC-Tni-120677	Tetraodon nigroviridis	23.75	2.40e-01	29.30
IUUC-Tbe-127251	Tupaia belangeri	25.00	4.30e-02	31.60
IUUC-Ttr-129157	Tursiops truncatus	25.00	4.00e-02	31.60
IUUC-Vpa-130130	Vicugna pacos	25.00	8.00e-02	30.80
IUUC-Xtr-132566	Xenopus tropicalis	25.00	4.30e-02	31.60
IUUC-Xma-134169	Xiphophorus maculatus	22.83	2.30e-01	29.30

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence