iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000000785.7	ENSRNOT00000001021.5	ENSRNOP00000001021.3
ENSRNOG00000000785.7	ENSRNOT00000087695.1	ENSRNOP00000074583.1
ENSRNOG00000000785.7	ENSRNOT00000092094.1	ENSRNOP00000073185.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.70e-08	32.5	63	123
E3 activity/RING/RING	4.00e-08	34.0	65	106

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPnltlrrl 64
             C++ le  ++Pv++++G+ + +++I +w ++ ++   cPv+r++ + ++l Pn  l ++
   Q: 63   ASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERdfPCPVCRKTSRYRSLRPNRQLGSM 123
           68*****************************88887799****************998766 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle +k+ p++  CgH f++ C+ +w        + f CP+Cr
   Q: 65   CSVCLEYLKE-PVIIECGHNFCKACITRW---WEDLERDFPCPVCR 106
           ********99.999************999...666889999****8 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MPRWGYIRKY GLLGANVRKQ SNPPTNTSLS PCLQVIMAET SLLEAGASAA STAAALENLQ 60
VEASCSVCLE YLKEPVIIEC GHNFCKACIT RWWEDLERDF PCPVCRKTSR YRSLRPNRQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGATAGGG CGCACCTCGG TCCACAGCCA AGATAACTTA CCTACTACCG CTTCACCGTA 60
AGCTAAATGC TAAACCTTAG CCAGTCGGAA GTGACGTGCA ACACGGCCTC TCAGGTCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001603	Ailuropoda melanoleuca	95.77	0.00e+00	939.00
IUUC-Apl-003354	Anas platyrhynchos	42.39	3.00e-105	375.00
IUUC-Aca-005381	Anolis carolinensis	69.67	0.00e+00	672.00
IUUC-Ame-011964	Astyanax mexicanus	34.40	1.00e-70	260.00
IUUC-Bta-012554	Bos taurus	92.07	9.00e-152	529.00
IUUC-Cja-019323	Callithrix jacchus	95.58	0.00e+00	914.00
IUUC-Cfa-020342	Canis familiaris	95.79	0.00e+00	932.00
IUUC-Cpo-022084	Cavia porcellus	91.03	9.00e-150	523.00
IUUC-Csa-023186	Chlorocebus sabaeus	95.79	0.00e+00	934.00
IUUC-Cho-024697	Choloepus hoffmanni	84.26	0.00e+00	834.00
IUUC-Dno-028914	Dasypus novemcinctus	43.79	8.00e-108	384.00
IUUC-Dor-031021	Dipodomys ordii	86.22	1.00e-143	503.00
IUUC-Ete-032936	Echinops telfairi	84.23	6.00e-150	523.00
IUUC-Eca-033687	Equus caballus	92.76	1.00e-152	532.00
IUUC-Eeu-034957	Erinaceus europaeus	95.61	2.00e-128	452.00
IUUC-Fca-035406	Felis catus	96.00	0.00e+00	933.00
IUUC-Fal-036705	Ficedula albicollis	45.57	4.00e-96	345.00
IUUC-Gmo-038505	Gadus morhua	35.78	2.00e-72	266.00
IUUC-Gac-041919	Gasterosteus aculeatus	35.79	2.00e-71	263.00
IUUC-Ggo-044526	Gorilla gorilla	90.10	0.00e+00	918.00
IUUC-Hsa-045719	Homo sapiens	90.10	0.00e+00	918.00
IUUC-Itr-048404	Ictidomys tridecemlineatus	97.89	0.00e+00	959.00
IUUC-Lch-049787	Latimeria chalumnae	40.43	8.00e-87	314.00
IUUC-Loc-052206	Lepisosteus oculatus	38.45	2.00e-85	309.00
IUUC-Laf-054295	Loxodonta africana	94.55	0.00e+00	926.00
IUUC-Mcc-055765	Macaca mulatta	91.37	0.00e+00	920.00
IUUC-Meu-055997	Macropus eugenii	58.99	2.00e-124	439.00
IUUC-Mmr-061030	Microcebus murinus	93.28	0.00e+00	652.00
IUUC-Mdo-062936	Monodelphis domestica	88.67	0.00e+00	840.00
IUUC-Mmu-063767	Mus musculus	97.68	0.00e+00	952.00
IUUC-Mpu-066160	Mustela putorius furo	95.77	0.00e+00	936.00
IUUC-Mlu-068126	Myotis lucifugus	91.03	2.00e-149	521.00
IUUC-Nle-070041	Nomascus leucogenys	85.50	0.00e+00	789.00
IUUC-Opr-070394	Ochotona princeps	90.04	0.00e+00	914.00
IUUC-Ont-071285	Oreochromis niloticus	35.65	4.00e-75	275.00
IUUC-Oan-072828	Ornithorhynchus anatinus	56.99	6.00e-160	556.00
IUUC-Ocu-073980	Oryctolagus cuniculus	92.72	0.00e+00	669.00
IUUC-Oga-088422	Otolemur garnettii	94.20	0.00e+00	917.00
IUUC-Oar-089277	Ovis aries	90.95	0.00e+00	860.00
IUUC-Ptr-090853	Pan troglodytes	90.10	0.00e+00	918.00
IUUC-Pan-091993	Papio anubis	95.79	0.00e+00	934.00
IUUC-Psi-092975	Pelodiscus sinensis	72.73	0.00e+00	635.00
IUUC-Pma-094519	Petromyzon marinus	27.07	2.00e-27	116.00
IUUC-Pfo-096831	Poecilia formosa	32.51	4.00e-68	252.00
IUUC-Pab-097944	Pongo abelii	95.79	0.00e+00	934.00
IUUC-Pca-100795	Procavia capensis	84.49	5.00e-173	600.00
IUUC-Pva-103180	Pteropus vampyrus	89.15	0.00e+00	902.00
IUUC-Sha-107411	Sarcophilus harrisii	52.61	2.00e-146	512.00
IUUC-Sar-113371	Sorex araneus	86.40	0.00e+00	728.00
IUUC-Ssc-116025	Sus scrofa	96.00	0.00e+00	936.00
IUUC-Tgu-116998	Taeniopygia guttata	46.07	9.00e-99	353.00
IUUC-Tru-117532	Takifugu rubripes	34.45	3.00e-70	259.00
IUUC-Tsy-119072	Tarsius syrichta	83.16	3.00e-175	607.00
IUUC-Tni-120490	Tetraodon nigroviridis	33.62	4.00e-73	268.00
IUUC-Tbe-127820	Tupaia belangeri	85.71	4.00e-137	481.00
IUUC-Ttr-128310	Tursiops truncatus	95.63	1.00e-129	456.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence