iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117431

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01011229

Gene Name

LONRF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000007379.1	ENSTGUT00000007685.1	ENSTGUP00000007607.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-08	34.1	303	341
E3 activity/RING/U-box	9.60e-12	44.7	299	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f++ p+++pCgH+f++ Cl++          + +CPlC+
   Q: 303  CSLCMRLFFE-PVTTPCGHTFCKGCLERC------LDHAPQCPLCK 341
           **********.9**************999......9*********7 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpltee 53
           ++f C++ + l+ +Pv++p+G+t+ + ++e++l++  + cP+++++l+e 
   Q: 299  SDFECSLCMRLFFEPVTTPCGHTFCKGCLERCLDHAPQ-CPLCKESLKEY 347
           68***********************************9.********875 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

LRCCGCRRFL GEPVTVPCGH TYCRRCLRRE LRARCRRCRD WLLPAGGTST AAAPLRTSVV 60
LNRLAEKWFP GECERARAGT RLEELLTQGR FREALGAANQ ALRADSSDLM LRIYRAESYV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCGCTGCT GCGGCTGCCG GAGGTTCCTG GGCGAGCCGG TGACCGTCCC GTGCGGGCAC 60
ACCTATTGCC GCCGCTGCCT CCGCAGGGAG CTGCGGGCCC GCTGCCGCCG CTGCCGGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg
PF13445--zf-RING_UBOX

SMART

SM00464--LON
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001989	Ailuropoda melanoleuca	71.16	0.00e+00	768.00
IUUC-Apl-003309	Anas platyrhynchos	94.00	0.00e+00	765.00
IUUC-Aca-004288	Anolis carolinensis	68.50	0.00e+00	837.00
IUUC-Ath-006654	Arabidopsis thaliana	33.98	4.00e-39	155.00
IUUC-Afu-008802	Aspergillus fumigatus	29.64	2.00e-39	157.00
IUUC-Ame-010716	Astyanax mexicanus	69.52	2.00e-156	545.00
IUUC-Bta-012903	Bos taurus	69.91	0.00e+00	811.00
IUUC-Bdi-014333	Brachypodium distachyon	42.17	7.00e-45	174.00
IUUC-Bol-016150	Brassica oleracea	37.12	7.00e-40	157.00
IUUC-Bra-016716	Brassica rapa	35.39	5.00e-37	148.00
IUUC-Cel-018356	Caenorhabditis elegans	34.15	9.00e-10	55.80
IUUC-Cja-019312	Callithrix jacchus	70.14	0.00e+00	835.00
IUUC-Cfa-020159	Canis familiaris	69.83	0.00e+00	826.00
IUUC-Cpo-022528	Cavia porcellus	69.98	0.00e+00	751.00
IUUC-Cre-022730	Chlamydomonas reinhardtii	33.78	7.00e-13	67.40
IUUC-Csa-023361	Chlorocebus sabaeus	69.15	0.00e+00	805.00
IUUC-Cho-024549	Choloepus hoffmanni	63.52	0.00e+00	637.00
IUUC-Cgl-026514	Colletotrichum gloeosporioides	32.19	2.00e-44	172.00
IUUC-Cme-027153	Cyanidioschyzon merolae	30.60	2.00e-27	116.00
IUUC-Dre-028195	Danio rerio	69.97	7.00e-155	540.00
IUUC-Dno-029284	Dasypus novemcinctus	71.16	0.00e+00	775.00
IUUC-Dor-031123	Dipodomys ordii	69.70	4.00e-164	570.00
IUUC-Dme-031919	Drosophila melanogaster	37.76	2.00e-67	250.00
IUUC-Ete-032455	Echinops telfairi	77.92	0.00e+00	652.00
IUUC-Eca-033248	Equus caballus	77.86	0.00e+00	639.00
IUUC-Eeu-034441	Erinaceus europaeus	78.63	0.00e+00	656.00
IUUC-Fca-035551	Felis catus	71.35	0.00e+00	777.00
IUUC-Fal-036731	Ficedula albicollis	90.46	0.00e+00	958.00
IUUC-Gmo-039315	Gadus morhua	51.58	8.00e-165	573.00
IUUC-Gga-040888	Gallus gallus	94.75	0.00e+00	794.00
IUUC-Gac-042121	Gasterosteus aculeatus	54.34	3.00e-176	611.00
IUUC-Ggo-044985	Gorilla gorilla	70.95	0.00e+00	786.00
IUUC-Hsa-046592	Homo sapiens	70.23	0.00e+00	821.00
IUUC-Hvu-047145	Hordeum vulgare	43.20	5.00e-27	114.00
IUUC-Itr-048573	Ictidomys tridecemlineatus	71.38	0.00e+00	811.00
IUUC-Lch-050404	Latimeria chalumnae	60.85	0.00e+00	713.00
IUUC-Laf-053431	Loxodonta africana	71.72	0.00e+00	776.00
IUUC-Mcc-055751	Macaca mulatta	68.01	0.00e+00	789.00
IUUC-Mtr-058075	Medicago truncatula	35.09	2.00e-44	172.00
IUUC-Mla-058946	Melampsora laricipopulina	35.64	4.00e-48	184.00
IUUC-Mga-059472	Meleagris gallopavo	94.36	7.00e-154	535.00
IUUC-Mvi-060228	Microbotryum violaceum	33.71	2.00e-51	197.00
IUUC-Mmr-061283	Microcebus murinus	70.40	0.00e+00	806.00
IUUC-Mmu-063169	Mus musculus	70.51	0.00e+00	812.00
IUUC-Mpu-066537	Mustela putorius furo	69.35	0.00e+00	804.00
IUUC-Mlu-067497	Myotis lucifugus	71.16	0.00e+00	775.00
IUUC-Nle-068971	Nomascus leucogenys	71.48	0.00e+00	775.00
IUUC-Opr-070791	Ochotona princeps	71.07	0.00e+00	677.00
IUUC-Ont-071548	Oreochromis niloticus	54.10	0.00e+00	627.00
IUUC-Oan-072747	Ornithorhynchus anatinus	81.68	0.00e+00	672.00
IUUC-Ocu-074928	Oryctolagus cuniculus	79.90	0.00e+00	657.00
IUUC-Oba-075239	Oryza barthii	41.74	5.00e-45	174.00
IUUC-Obr-076158	Oryza brachyantha	36.82	4.00e-46	178.00
IUUC-Ogu-078154	Oryza glumaepatula	42.17	2.00e-45	176.00
IUUC-Oin-079067	Oryza indica	37.06	6.00e-46	178.00
IUUC-Olo-080663	Oryza longistaminata	41.74	1.00e-44	173.00
IUUC-Oni-082119	Oryza nivara	37.06	5.00e-46	178.00
IUUC-Opu-083266	Oryza punctata	41.76	7.00e-33	134.00
IUUC-Oru-085190	Oryza rufipogon	41.74	6.00e-45	174.00
IUUC-Ola-086977	Oryzias latipes	55.66	0.00e+00	639.00
IUUC-Oga-088719	Otolemur garnettii	69.63	0.00e+00	832.00
IUUC-Oar-089577	Ovis aries	70.52	0.00e+00	769.00
IUUC-Ptr-090711	Pan troglodytes	70.23	0.00e+00	821.00
IUUC-Pan-092587	Papio anubis	69.46	0.00e+00	809.00
IUUC-Psi-093128	Pelodiscus sinensis	74.87	0.00e+00	850.00
IUUC-Pfo-096474	Poecilia formosa	54.16	0.00e+00	639.00
IUUC-Pab-097800	Pongo abelii	69.98	0.00e+00	813.00
IUUC-Pgr-103289	Puccinia graminis	27.25	1.00e-30	127.00
IUUC-Ptt-103898	Puccinia triticina	28.96	4.00e-29	122.00
IUUC-Rno-105718	Rattus norvegicus	70.06	0.00e+00	787.00
IUUC-Sit-110495	Setaria italica	40.43	2.00e-45	176.00
IUUC-Sar-113220	Sorex araneus	77.95	0.00e+00	628.00
IUUC-Sbi-114779	Sorghum bicolor	37.43	1.00e-30	127.00
IUUC-Ssc-115733	Sus scrofa	69.52	0.00e+00	816.00
IUUC-Tru-118274	Takifugu rubripes	54.46	1.00e-173	602.00
IUUC-Tsy-119043	Tarsius syrichta	70.11	0.00e+00	763.00
IUUC-Tni-120766	Tetraodon nigroviridis	48.92	5.00e-162	563.00
IUUC-Tae-124676	Triticum aestivum	35.69	4.00e-45	175.00
IUUC-Tur-126297	Triticum urartu	41.85	4.00e-35	142.00
IUUC-Tme-127112	Tuber melanosporum	36.27	5.00e-48	184.00
IUUC-Tbe-127284	Tupaia belangeri	77.61	0.00e+00	632.00
IUUC-Uma-129541	Ustilago maydis	31.54	1.00e-34	141.00
IUUC-Vda-129721	Verticillium dahliae	35.35	4.00e-35	142.00
IUUC-Vpa-130408	Vicugna pacos	76.84	0.00e+00	630.00
IUUC-Xtr-132417	Xenopus tropicalis	59.43	0.00e+00	711.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence