iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116197

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU468031

Gene Name

WDR38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000005594.2	ENSSSCT00000006150.2	ENSSSCP00000005991.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-47	157.8	231	269
UBD/Beta-Prp	2.60e-73	247.1	20	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH  +v ++af +d   l+s+++ +t+kvWD  tg+++ 
   Q: 231  GHVTWVKSIAFsPDgLQLASAGYSHTVKVWDCNTGRCTD 269
           8999********99788********************86 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           h + +++ +fspd++ l+t+s+dg++  w++++g ll++l gh+++v+ ++fspdg +++++s+D ti++wd+ + +c+++lkgh++sv
   Q: 20   HRGEVNSSTFSPDGQRLLTASEDGCVYGWETQSGRLLWKLGGHTGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSV 108
           66788899********************************************************************************* PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
            ++sfsp+++ l+sG++d+ +++w++++gq+l+  l gh++++++  + p++++l++Gs D+t+r+Wdl+ g
   Q: 109  ETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLR-HLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGG 179
           *********************************.**********************************9866 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MNSGAPGTLA VGRVKFYCRH RGEVNSSTFS PDGQRLLTAS EDGCVYGWET QSGRLLWKLG 60
GHTGPVKFCR FSPDGRLFAS TSSDCTIRLW DVAKVECLQV LKGHQRSVET VSFSPDSKQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCCCCTTC CTCTGAGCCA GGGCCCGCGG GTCAGGCCAG CGCCCACCTA GGAGGGAGCC 60
CCCGGGGGCG GGCGGCCGCG GGCCCATGAA CAGCGGGGCC CCCGGGACGC TGGCGGTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

KEGG

ssc:100154489

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001664	Ailuropoda melanoleuca	85.94	2.00e-156	544.00
IUUC-Ame-010858	Astyanax mexicanus	49.49	3.00e-79	288.00
IUUC-Bta-012352	Bos taurus	87.16	4.00e-152	530.00
IUUC-Cja-019585	Callithrix jacchus	77.88	1.00e-143	502.00
IUUC-Cfa-020062	Canis familiaris	80.07	2.00e-128	451.00
IUUC-Csa-023528	Chlorocebus sabaeus	80.19	1.00e-147	515.00
IUUC-Cin-025426	Ciona intestinalis	35.67	1.00e-52	199.00
IUUC-Dre-027740	Danio rerio	50.00	3.00e-51	194.00
IUUC-Dno-030012	Dasypus novemcinctus	70.66	6.00e-132	463.00
IUUC-Dor-030536	Dipodomys ordii	66.67	4.00e-106	377.00
IUUC-Ete-032871	Echinops telfairi	75.43	6.00e-99	352.00
IUUC-Eca-033729	Equus caballus	87.50	4.00e-153	533.00
IUUC-Eeu-034740	Erinaceus europaeus	81.58	2.00e-145	507.00
IUUC-Fca-036514	Felis catus	85.30	4.00e-157	546.00
IUUC-Ggo-044793	Gorilla gorilla	77.32	3.00e-142	497.00
IUUC-Hsa-046414	Homo sapiens	79.30	7.00e-145	506.00
IUUC-Itr-048798	Ictidomys tridecemlineatus	77.97	1.00e-126	445.00
IUUC-Lch-049905	Latimeria chalumnae	50.17	3.00e-86	311.00
IUUC-Loc-052101	Lepisosteus oculatus	53.00	3.00e-85	308.00
IUUC-Laf-053443	Loxodonta africana	77.67	8.00e-136	476.00
IUUC-Mcc-055346	Macaca mulatta	80.51	2.00e-148	517.00
IUUC-Meu-056531	Macropus eugenii	64.22	9.00e-82	295.00
IUUC-Mor-057042	Magnaporthe oryzae	33.60	7.00e-33	135.00
IUUC-Mmr-061721	Microcebus murinus	83.78	2.00e-146	510.00
IUUC-Mdo-062379	Monodelphis domestica	65.17	9.00e-112	396.00
IUUC-Mmu-064175	Mus musculus	73.56	7.00e-126	442.00
IUUC-Mpu-066361	Mustela putorius furo	86.15	1.00e-148	518.00
IUUC-Mlu-067300	Myotis lucifugus	65.45	3.00e-100	357.00
IUUC-Nle-070150	Nomascus leucogenys	81.14	2.00e-142	497.00
IUUC-Opr-071060	Ochotona princeps	69.80	4.00e-109	387.00
IUUC-Ocu-074101	Oryctolagus cuniculus	79.23	3.00e-145	507.00
IUUC-Oga-088479	Otolemur garnettii	79.32	1.00e-138	485.00
IUUC-Oar-089608	Ovis aries	86.73	2.00e-151	528.00
IUUC-Ptr-091521	Pan troglodytes	80.51	2.00e-148	518.00
IUUC-Pan-092092	Papio anubis	80.51	2.00e-148	518.00
IUUC-Pab-098454	Pongo abelii	80.83	3.00e-149	520.00
IUUC-Pca-100981	Procavia capensis	81.27	6.00e-144	503.00
IUUC-Pva-102491	Pteropus vampyrus	85.67	3.00e-155	540.00
IUUC-Rno-105417	Rattus norvegicus	74.37	3.00e-120	424.00
IUUC-Sha-107649	Sarcophilus harrisii	65.28	9.00e-113	399.00
IUUC-Sar-113110	Sorex araneus	64.09	2.00e-86	311.00
IUUC-Tbe-127734	Tupaia belangeri	75.57	3.00e-76	278.00
IUUC-Ttr-128709	Tursiops truncatus	83.28	2.00e-149	520.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence