iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012584

Ensembl Protein ID

ENSBTAP00000047993.2

UniProt Accession

Q8HYB6; Q3ZBC6; GBRL1_BOVIN

Genbank Protein ID

AAI03443.1; AAM77035.1

Protein Name

Gamma-aminobutyric acid receptor-associated protein-like 1; GABA(A) receptor-associated protein-like 1

Genbank Nucleotide ID

BC103442; AY117146

Gene Name

GABARAPL1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000011765.5	ENSBTAT00000055075.2	ENSBTAP00000047993.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/ATG8	1.70e-53	179.3	14	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/ATG8

   S: 2    rkeevekirdkfpdkiPvivekakkekipeldkkkylvPsdltvgqlvkiirkrlqlraedalfllvnnslvsvsatlaeiyeeekded 90
           rk+e+ekir+k+pd++Pviveka+k+++p+ldk+kylvPsdltvgq++++irkr++lr+edalf++vnn+++++sat++++ye++++ed
   Q: 14   RKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEED 102
           89*************************************************************************************** PP
   S: 91   gflyvayaseetfG 104
           +flyvay++e+++G
   Q: 103  YFLYVAYSDESVYG 116
           *************9 PP

Organism

Bos taurus

Functional Description
(View)

Ubiquitin-like modifier that increases cell-surface expression of kappa-type opioid receptor through facilitating anterograde intracellular trafficking of the receptor. Involved in formation of autophagosomal vacuoles. Whereas LC3s are involved in elongation of the phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a later stage in autophagosome maturation (By similarity).

Protein Sequence
(Fasta)

MKFQYKEDHP FEYRKKEGEK IRKKYPDRVP VIVEKAPKAR VPDLDKRKYL VPSDLTVGQF 60
YFLIRKRIHL RPEDALFFFV NNTIPPTSAT MGQLYEDNHE EDYFLYVAYS DESVYGK 117

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCTCGCAG CTCTCGGTAA AAGCCACCGG GAATTCTTTA CCTGGCCCTA CCCTGTCTTG 60
GAACCCAGGC CCCGAGTCCC TCCTTTCTGA AAGCTCTGCC GAGCGGCGCT GCGACGTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0206--Cytoskeleton
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0449--Lipoprotein
KW-0472--Membrane
KW-0493--Microtubule
KW-1185--Reference proteome

Interpro

IPR004241--Atg8-like
IPR029071--Ubiquitin-rel_dom

Pfam

PF02991--Atg8

Gene Ontology

GO:0005776--C:autophagosome
GO:0030659--C:cytoplasmic vesicle membrane
GO:0005783--C:endoplasmic reticulum
GO:0005794--C:Golgi apparatus
GO:0005874--C:microtubule
GO:0005739--C:mitochondrion
GO:0006914--P:autophagy

KEGG

bta:338472

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002173	Ailuropoda melanoleuca	100.00	6.00e-65	238.00
IUUC-Apl-003994	Anas platyrhynchos	100.00	1.00e-64	237.00
IUUC-Aca-004544	Anolis carolinensis	94.87	4.00e-60	222.00
IUUC-Cja-019701	Callithrix jacchus	100.00	5.00e-65	238.00
IUUC-Cfa-020883	Canis familiaris	100.00	5.00e-65	238.00
IUUC-Cpo-022522	Cavia porcellus	100.00	5.00e-65	238.00
IUUC-Csa-024162	Chlorocebus sabaeus	100.00	5.00e-65	238.00
IUUC-Cho-025008	Choloepus hoffmanni	95.73	8.00e-62	228.00
IUUC-Dno-030014	Dasypus novemcinctus	100.00	3.00e-65	239.00
IUUC-Eca-033464	Equus caballus	100.00	5.00e-65	238.00
IUUC-Eeu-034826	Erinaceus europaeus	76.92	2.00e-46	176.00
IUUC-Fca-036435	Felis catus	100.00	2.00e-64	237.00
IUUC-Fal-037143	Ficedula albicollis	100.00	1.00e-64	237.00
IUUC-Gga-040919	Gallus gallus	100.00	5.00e-65	238.00
IUUC-Gma-044021	Glycine max	57.39	4.00e-38	149.00
IUUC-Ggo-044931	Gorilla gorilla	100.00	5.00e-65	238.00
IUUC-Hsa-046493	Homo sapiens	100.00	5.00e-65	238.00
IUUC-Itr-048838	Ictidomys tridecemlineatus	100.00	1.00e-64	237.00
IUUC-Laf-054083	Loxodonta africana	100.00	4.00e-65	239.00
IUUC-Mcc-055410	Macaca mulatta	100.00	5.00e-65	238.00
IUUC-Meu-056010	Macropus eugenii	100.00	5.00e-65	238.00
IUUC-Mtr-057664	Medicago truncatula	57.39	1.00e-33	134.00
IUUC-Mga-060108	Meleagris gallopavo	100.00	1.00e-64	237.00
IUUC-Mmr-060690	Microcebus murinus	100.00	5.00e-65	238.00
IUUC-Mdo-062279	Monodelphis domestica	100.00	2.00e-65	240.00
IUUC-Mmu-063624	Mus musculus	100.00	5.00e-65	238.00
IUUC-Mpu-066745	Mustela putorius furo	100.00	6.00e-65	238.00
IUUC-Oan-073612	Ornithorhynchus anatinus	98.85	6.00e-47	177.00
IUUC-Ocu-073934	Oryctolagus cuniculus	100.00	5.00e-65	238.00
IUUC-Oga-088360	Otolemur garnettii	100.00	5.00e-65	238.00
IUUC-Oar-089396	Ovis aries	100.00	9.00e-65	238.00
IUUC-Ptr-091136	Pan troglodytes	94.87	1.00e-60	224.00
IUUC-Psi-093055	Pelodiscus sinensis	100.00	5.00e-65	238.00
IUUC-Pfo-096947	Poecilia formosa	61.54	5.00e-32	129.00
IUUC-Pop-099400	Populus trichocarpa	58.26	4.00e-34	136.00
IUUC-Pva-103103	Pteropus vampyrus	100.00	5.00e-65	238.00
IUUC-Rno-105347	Rattus norvegicus	100.00	5.00e-65	238.00
IUUC-Sha-106802	Sarcophilus harrisii	100.00	4.00e-65	239.00
IUUC-Ssc-115683	Sus scrofa	99.15	1.00e-64	237.00
IUUC-Tgu-116669	Taeniopygia guttata	100.00	7.00e-65	238.00
IUUC-Tsy-118919	Tarsius syrichta	100.00	5.00e-65	238.00
IUUC-Tca-121335	Theobroma cacao	58.26	6.00e-34	136.00
IUUC-Tbe-128099	Tupaia belangeri	76.92	2.00e-46	176.00
IUUC-Ttr-128712	Tursiops truncatus	100.00	5.00e-65	238.00
IUUC-Vpa-130227	Vicugna pacos	100.00	2.00e-47	179.00
IUUC-Vvi-131213	Vitis vinifera	56.52	4.00e-34	136.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence