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Tag Content
iUUCD ID IUUC-Aly-005791
Ensembl Protein ID fgenesh2_kg.8__2062__AT5G60940.1
UniProt Accession D7MUF8; D7MUF8_ARALL
Genbank Protein ID EFH40970.1
Protein Name Transducin family protein
Genbank Nucleotide ID GL348720
Gene Name ARALYDRAFT_496246
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.8__2062__AT5G60940.1 fgenesh2_kg.8__2062__AT5G60940.1 fgenesh2_kg.8__2062__AT5G60940.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 7.40e-25 86.7 122 152
UBD/Beta-Prp 2.00e-56 192.0 120 388
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ v+c +f +d  ++++G+ D +ik++++
   Q: 122  HKSVVRCARFsPDgMFFATGGADTSIKLFEV 152
           9**********997889************97 PP
   

   UBD/Beta-Prp
   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgse 72
           ++hksv++c  fspd+ ++atg++d +ik+++v + k            +r++++h +++++++f+p++ il+++++
   Q: 120  SEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQmisgdtqarplIRTFYDHAEPINDLDFHPRSTILISSAK 196
           46889****************************998889************************************** PP
   S: 73   Drtikvwdlstgkcvhtlk..ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvv 144
           D+ ik +d+s+ +  +++k  +  ++v+s+sf+psg++l++G+++ + +++d++t+qc+     ++sg +g++n v+
   Q: 197  DNCIKFFDFSKTTAKRAFKvfQDAHNVRSVSFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPsnfPDSGVSGAINQVR 273
           **********8888888777789************************************9999************** PP
   S: 145  vhpdgnllvsGslDrtvrlWdlktgkllrtltgghtd.svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng 220
           ++++g++++++s+D+++rl+d  ++k++r  + +h +  v+s  f++++++++s ++d+tvklw++ +g++v+++ g
   Q: 274  YSSTGSIYITASKDGAIRLFDGVSAKCVRSISNAHGKsEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLG 350
           *******************************8888651699999********************************* PP
   S: 221  htdnvksvrfs..pnderlvsgssDgsiri..Wdlrsgd 255
            ++  ++ ++   + +e+++s   + s  +  Wd r+gd
   Q: 351  AKRIKLRSQAIfnDTEEFVISID-EASNEVvtWDARTGD 388
           99666555544336666666664.55555555***9997 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MGNSGDLEQA LQDGNIFRQL NALIVAHLRH HNLSQVASVV ASATMTPLYI EVPPNRLLEL 60
VAKGLAAENN GTLRGVSSSV LLPSPYGSIT TPRTASIDFS VTHAKGSSKT IPKHESKTLS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-005791|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGAGGAGGAA GAAGACGATG GTTTAACAGA GTAAGCTCAA ATATGGCGAC TTTGGTTTCG 60
AATTAAACTT GTGAGGTAGG TTTTAGGGTT TTTTAAGTGA TAAAGAATGG GGAACAGTGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-005791|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
KEGG aly:ARALYDRAFT_496246
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002163 Ailuropoda melanoleuca 37.26 7.00e-80 290.00
IUUC-Atr-002687 Amborella trichopoda 55.60 1.00e-155 541.00
IUUC-Apl-003438 Anas platyrhynchos 37.26 1.00e-80 292.00
IUUC-Aca-005178 Anolis carolinensis 37.50 1.00e-80 293.00
IUUC-Ath-006689 Arabidopsis thaliana 96.97 0.00e+00 833.00
IUUC-Ame-011217 Astyanax mexicanus 46.44 3.00e-69 254.00
IUUC-Bta-012619 Bos taurus 37.26 6.00e-80 290.00
IUUC-Bdi-014515 Brachypodium distachyon 61.02 7.00e-150 523.00
IUUC-Bra-017450 Brassica rapa 80.79 0.00e+00 728.00
IUUC-Cel-018151 Caenorhabditis elegans 40.12 2.00e-68 252.00
IUUC-Cja-019304 Callithrix jacchus 37.50 2.00e-80 292.00
IUUC-Cfa-020208 Canis familiaris 37.26 7.00e-80 290.00
IUUC-Cpo-022245 Cavia porcellus 37.26 7.00e-80 290.00
IUUC-Csa-023066 Chlorocebus sabaeus 37.50 2.00e-80 292.00
IUUC-Cho-024770 Choloepus hoffmanni 42.68 2.00e-77 281.00
IUUC-Cin-025621 Ciona intestinalis 37.61 1.00e-67 249.00
IUUC-Csv-026071 Ciona savignyi 40.84 5.00e-74 271.00
IUUC-Dre-028254 Danio rerio 36.56 2.00e-77 281.00
IUUC-Dno-029903 Dasypus novemcinctus 37.26 7.00e-80 290.00
IUUC-Dor-030423 Dipodomys ordii 37.26 8.00e-80 290.00
IUUC-Dme-031993 Drosophila melanogaster 38.20 4.00e-70 258.00
IUUC-Eca-033316 Equus caballus 37.26 8.00e-80 290.00
IUUC-Eeu-035192 Erinaceus europaeus 38.30 3.00e-79 288.00
IUUC-Fca-036447 Felis catus 37.26 7.00e-80 290.00
IUUC-Fal-037601 Ficedula albicollis 37.26 1.00e-80 292.00
IUUC-Gmo-038531 Gadus morhua 35.92 5.00e-73 267.00
IUUC-Gga-040869 Gallus gallus 37.26 2.00e-80 292.00
IUUC-Gac-042380 Gasterosteus aculeatus 37.56 2.00e-76 278.00
IUUC-Gma-043478 Glycine max 67.90 6.00e-179 619.00
IUUC-Ggo-045302 Gorilla gorilla 37.50 2.00e-80 292.00
IUUC-Hsa-045678 Homo sapiens 37.50 2.00e-80 292.00
IUUC-Hvu-047301 Hordeum vulgare 61.41 5.00e-148 516.00
IUUC-Itr-048259 Ictidomys tridecemlineatus 37.26 7.00e-80 290.00
IUUC-Lch-050319 Latimeria chalumnae 36.79 2.00e-78 285.00
IUUC-Lpe-051440 Leersia perrieri 47.84 4.00e-126 444.00
IUUC-Loc-052035 Lepisosteus oculatus 37.50 2.00e-79 288.00
IUUC-Laf-054275 Loxodonta africana 37.26 7.00e-80 290.00
IUUC-Mcc-055857 Macaca mulatta 32.54 1.00e-60 226.00
IUUC-Mtr-058667 Medicago truncatula 64.57 4.00e-167 580.00
IUUC-Mga-059710 Meleagris gallopavo 37.26 2.00e-80 292.00
IUUC-Mmr-060604 Microcebus murinus 37.26 7.00e-80 290.00
IUUC-Mdo-062953 Monodelphis domestica 37.26 5.00e-80 290.00
IUUC-Mmu-064292 Mus musculus 37.03 1.00e-79 289.00
IUUC-Mac-064568 Musa acuminata 70.12 1.00e-142 498.00
IUUC-Mpu-066294 Mustela putorius furo 45.02 3.00e-53 201.00
IUUC-Mlu-067279 Myotis lucifugus 38.17 2.00e-79 289.00
IUUC-Nle-069322 Nomascus leucogenys 37.50 2.00e-80 292.00
IUUC-Opr-070580 Ochotona princeps 37.26 7.00e-80 290.00
IUUC-Ont-072554 Oreochromis niloticus 37.26 4.00e-79 287.00
IUUC-Oan-072856 Ornithorhynchus anatinus 37.03 1.00e-79 289.00
IUUC-Ocu-074150 Oryctolagus cuniculus 33.81 2.00e-64 239.00
IUUC-Oba-075585 Oryza barthii 55.11 4.00e-141 493.00
IUUC-Obr-076069 Oryza brachyantha 59.63 1.00e-142 499.00
IUUC-Ogl-077045 Oryza glaberrima 60.27 5.00e-155 540.00
IUUC-Ogu-078697 Oryza glumaepatula 59.86 8.00e-147 514.00
IUUC-Oin-080119 Oryza indica 60.27 5.00e-155 540.00
IUUC-Olo-081093 Oryza longistaminata 50.32 7.00e-86 311.00
IUUC-Ome-081718 Oryza meridionalis 51.24 1.00e-120 426.00
IUUC-Oni-082072 Oryza nivara 55.11 4.00e-141 493.00
IUUC-Opu-084080 Oryza punctata 53.51 1.00e-118 418.00
IUUC-Oru-085070 Oryza rufipogon 56.57 5.00e-140 491.00
IUUC-Osa-086149 Oryza sativa 60.27 5.00e-155 540.00
IUUC-Ola-086697 Oryzias latipes 37.26 5.00e-79 287.00
IUUC-Oga-088697 Otolemur garnettii 37.26 7.00e-80 290.00
IUUC-Oar-089774 Ovis aries 37.26 1.00e-79 289.00
IUUC-Ptr-090924 Pan troglodytes 37.50 2.00e-80 292.00
IUUC-Pan-092373 Papio anubis 37.50 3.00e-80 291.00
IUUC-Psi-094001 Pelodiscus sinensis 37.26 6.00e-80 290.00
IUUC-Pma-094274 Petromyzon marinus 36.15 1.00e-74 273.00
IUUC-Ppa-095562 Physcomitrella patens 61.25 6.00e-156 543.00
IUUC-Pfo-097235 Poecilia formosa 37.26 6.00e-79 287.00
IUUC-Pab-098608 Pongo abelii 37.50 2.00e-80 292.00
IUUC-Pca-100268 Procavia capensis 37.26 6.00e-80 290.00
IUUC-Ppe-101425 Prunus persica 68.48 2.00e-178 617.00
IUUC-Pva-103183 Pteropus vampyrus 37.26 7.00e-80 290.00
IUUC-Rno-105097 Rattus norvegicus 37.03 1.00e-79 289.00
IUUC-Sha-107642 Sarcophilus harrisii 37.26 5.00e-80 290.00
IUUC-Smo-108680 Selaginella moellendorffii 57.18 2.00e-142 498.00
IUUC-Sit-110471 Setaria italica 61.72 4.00e-156 544.00
IUUC-Sly-111143 Solanum lycopersicum 63.67 3.00e-89 320.00
IUUC-Stu-111926 Solanum tuberosum 70.37 6.00e-70 255.00
IUUC-Sar-112947 Sorex araneus 44.35 3.00e-62 230.00
IUUC-Sbi-113769 Sorghum bicolor 61.02 2.00e-150 525.00
IUUC-Ssc-115736 Sus scrofa 37.26 7.00e-80 290.00
IUUC-Tgu-117457 Taeniopygia guttata 37.26 1.00e-80 292.00
IUUC-Tru-117760 Takifugu rubripes 37.26 7.00e-79 286.00
IUUC-Tsy-118943 Tarsius syrichta 36.56 1.00e-75 276.00
IUUC-Tni-120081 Tetraodon nigroviridis 36.79 2.00e-78 285.00
IUUC-Tca-121190 Theobroma cacao 71.63 0.00e+00 641.00
IUUC-Tae-125535 Triticum aestivum 60.60 3.00e-145 507.00
IUUC-Tur-126329 Triticum urartu 58.31 2.00e-137 482.00
IUUC-Tbe-127878 Tupaia belangeri 37.26 3.00e-79 288.00
IUUC-Ttr-128985 Tursiops truncatus 37.26 7.00e-80 290.00
IUUC-Vpa-130147 Vicugna pacos 37.26 7.00e-80 290.00
IUUC-Vvi-130935 Vitis vinifera 66.13 3.00e-176 610.00
IUUC-Xtr-132482 Xenopus tropicalis 37.03 3.00e-79 288.00
IUUC-Xma-133929 Xiphophorus maculatus 37.26 6.00e-79 287.00
Created Date 25-Jun-2017

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