iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-011323

Ensembl Protein ID

ENSAMXP00000018348.1

UniProt Accession

W5LET6; W5LET6_ASTMX

Genbank Protein ID

ENSAMXP00000018348

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01034429

Gene Name

KDM5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000017813.1	ENSAMXT00000018348.1	ENSAMXP00000018348.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.80e-19	69.9	302	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  Cg+g+e++  l+ C+ C++ +H  Cl ++  +++p+ + w CpkC +
   Q: 302  MCMACGRGDEED-RLLLCDGCDDSYHTFCLIPP-LQDVPKGD-WRCPKCVA 349
           8*********88.5*******************.*******7.******75 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MSMYAEFVPP PECPVFEPSW EDFSDPLGYI SKIRPIAEKS GICKIRPPQD WQPPFACDVR 60
NFRFTPRVQR LNELEALTRI KLNFLDQIAK FWELQGSKLR FPHVEKKILD LYLLSKLVSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTATGT ACGCGGAGTT CGTCCCACCT CCAGAGTGTC CCGTTTTCGA ACCCAGCTGG 60
GAGGATTTTT CAGATCCACT GGGCTATATA TCTAAAATAC GACCCATTGC AGAGAAATCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002061	Ailuropoda melanoleuca	74.83	0.00e+00	2164.00
IUUC-Apl-004141	Anas platyrhynchos	75.20	0.00e+00	2178.00
IUUC-Aca-004952	Anolis carolinensis	73.98	0.00e+00	2185.00
IUUC-Acl-008162	Aspergillus clavatus	30.70	7.00e-122	432.00
IUUC-Afl-008625	Aspergillus flavus	30.19	2.00e-117	417.00
IUUC-Afu-008796	Aspergillus fumigatus	30.98	2.00e-122	434.00
IUUC-Aor-010155	Aspergillus oryzae	30.19	3.00e-117	417.00
IUUC-Ate-010453	Aspergillus terreus	30.22	4.00e-117	417.00
IUUC-Bgr-012241	Blumeria graminis	31.32	2.00e-117	418.00
IUUC-Bta-012902	Bos taurus	74.15	0.00e+00	2172.00
IUUC-Bdi-014050	Brachypodium distachyon	30.28	4.00e-117	417.00
IUUC-Cja-018988	Callithrix jacchus	74.45	0.00e+00	2012.00
IUUC-Cfa-020212	Canis familiaris	73.83	0.00e+00	2130.00
IUUC-Cpo-022221	Cavia porcellus	78.16	0.00e+00	1520.00
IUUC-Csa-023575	Chlorocebus sabaeus	75.15	0.00e+00	2191.00
IUUC-Cho-024280	Choloepus hoffmanni	70.44	0.00e+00	1954.00
IUUC-Cin-025321	Ciona intestinalis	46.71	0.00e+00	1046.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	30.38	2.00e-116	414.00
IUUC-Cne-026851	Cryptococcus neoformans	29.24	6.00e-112	399.00
IUUC-Dre-027909	Danio rerio	85.07	0.00e+00	1855.00
IUUC-Dno-029473	Dasypus novemcinctus	74.65	0.00e+00	2051.00
IUUC-Dor-030281	Dipodomys ordii	77.26	0.00e+00	948.00
IUUC-Dse-031479	Dothistroma septosporum	30.23	7.00e-121	429.00
IUUC-Eca-034265	Equus caballus	73.96	0.00e+00	2155.00
IUUC-Eeu-034692	Erinaceus europaeus	59.52	0.00e+00	1117.00
IUUC-Fca-035476	Felis catus	75.02	0.00e+00	2165.00
IUUC-Fal-037078	Ficedula albicollis	74.58	0.00e+00	2073.00
IUUC-Fox-037694	Fusarium oxysporum	31.82	5.00e-100	360.00
IUUC-Fso-038127	Fusarium solani	29.26	4.00e-116	413.00
IUUC-Gmo-039140	Gadus morhua	52.38	0.00e+00	1345.00
IUUC-Ggr-039929	Gaeumannomyces graminis	30.06	1.00e-113	405.00
IUUC-Gga-040466	Gallus gallus	75.00	0.00e+00	2245.00
IUUC-Gac-042566	Gasterosteus aculeatus	85.28	0.00e+00	2518.00
IUUC-Gma-042675	Glycine max	32.27	6.00e-103	369.00
IUUC-Ggo-044524	Gorilla gorilla	74.23	0.00e+00	1808.00
IUUC-Hsa-045821	Homo sapiens	74.83	0.00e+00	2173.00
IUUC-Kpa-049245	Komagataella pastoris	22.12	1.00e-29	125.00
IUUC-Lch-050630	Latimeria chalumnae	69.45	0.00e+00	2019.00
IUUC-Lpe-051537	Leersia perrieri	30.60	6.00e-89	323.00
IUUC-Loc-051963	Lepisosteus oculatus	83.76	0.00e+00	2289.00
IUUC-Laf-053918	Loxodonta africana	68.75	0.00e+00	1917.00
IUUC-Mcc-055672	Macaca mulatta	75.22	0.00e+00	2188.00
IUUC-Meu-056643	Macropus eugenii	54.70	0.00e+00	1313.00
IUUC-Mor-057198	Magnaporthe oryzae	31.32	3.00e-122	433.00
IUUC-Mtr-058113	Medicago truncatula	30.26	4.00e-98	353.00
IUUC-Mga-059192	Meleagris gallopavo	66.89	0.00e+00	1845.00
IUUC-Mmr-060968	Microcebus murinus	74.88	0.00e+00	2180.00
IUUC-Mdo-062945	Monodelphis domestica	74.98	0.00e+00	2178.00
IUUC-Mmu-063614	Mus musculus	74.22	0.00e+00	2163.00
IUUC-Mpu-066349	Mustela putorius furo	74.77	0.00e+00	2164.00
IUUC-Mlu-067363	Myotis lucifugus	75.17	0.00e+00	2205.00
IUUC-Nfi-068430	Neosartorya fischeri	30.79	4.00e-120	426.00
IUUC-Ncr-068763	Neurospora crassa	29.60	4.00e-116	413.00
IUUC-Nle-070142	Nomascus leucogenys	74.90	0.00e+00	2181.00
IUUC-Opr-071002	Ochotona princeps	68.50	0.00e+00	1810.00
IUUC-Ont-072471	Oreochromis niloticus	88.70	0.00e+00	2370.00
IUUC-Oan-072797	Ornithorhynchus anatinus	67.29	0.00e+00	1732.00
IUUC-Ocu-074164	Oryctolagus cuniculus	74.80	0.00e+00	2186.00
IUUC-Opu-083164	Oryza punctata	28.70	8.00e-88	319.00
IUUC-Ola-087076	Oryzias latipes	81.79	0.00e+00	2551.00
IUUC-Oga-088350	Otolemur garnettii	73.04	0.00e+00	2095.00
IUUC-Oar-090045	Ovis aries	74.33	0.00e+00	2178.00
IUUC-Ptr-091199	Pan troglodytes	75.27	0.00e+00	2176.00
IUUC-Pan-092094	Papio anubis	73.88	0.00e+00	2154.00
IUUC-Psi-093550	Pelodiscus sinensis	75.39	0.00e+00	2165.00
IUUC-Pma-094137	Petromyzon marinus	48.96	0.00e+00	1305.00
IUUC-Pno-094879	Phaeosphaeria nodorum	29.80	2.00e-118	421.00
IUUC-Pfo-097266	Poecilia formosa	85.67	0.00e+00	2625.00
IUUC-Pab-098576	Pongo abelii	74.90	0.00e+00	2173.00
IUUC-Pca-100123	Procavia capensis	76.11	0.00e+00	1361.00
IUUC-Pva-103109	Pteropus vampyrus	70.31	0.00e+00	2026.00
IUUC-Pte-104195	Pyrenophora teres	30.15	5.00e-124	439.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	30.09	1.00e-125	445.00
IUUC-Rno-105664	Rattus norvegicus	74.35	0.00e+00	2164.00
IUUC-Sce-106207	Saccharomyces cerevisiae	36.25	2.00e-74	273.00
IUUC-Sha-107506	Sarcophilus harrisii	77.31	0.00e+00	1944.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	22.00	2.00e-45	178.00
IUUC-Spo-108283	Schizosaccharomyces pombe	24.08	9.00e-58	219.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	30.08	5.00e-121	429.00
IUUC-Smo-108843	Selaginella moellendorffii	55.32	4.00e-11	63.50
IUUC-Sly-111298	Solanum lycopersicum	31.41	1.00e-101	365.00
IUUC-Sar-113052	Sorex araneus	74.03	0.00e+00	2149.00
IUUC-Sbi-114173	Sorghum bicolor	60.47	7.00e-12	64.70
IUUC-Ssc-116354	Sus scrofa	55.95	0.00e+00	1390.00
IUUC-Tgu-116613	Taeniopygia guttata	75.12	0.00e+00	2192.00
IUUC-Tru-118604	Takifugu rubripes	83.48	0.00e+00	2600.00
IUUC-Tsy-119237	Tarsius syrichta	70.38	0.00e+00	1855.00
IUUC-Tni-120779	Tetraodon nigroviridis	83.46	0.00e+00	2623.00
IUUC-Tre-122213	Trichoderma reesei	29.27	7.00e-113	402.00
IUUC-Tvi-122263	Trichoderma virens	29.29	9.00e-109	389.00
IUUC-Tme-127087	Tuber melanosporum	34.44	5.00e-123	436.00
IUUC-Tbe-128040	Tupaia belangeri	68.46	0.00e+00	763.00
IUUC-Ttr-129242	Tursiops truncatus	73.50	0.00e+00	2130.00
IUUC-Vda-129733	Verticillium dahliae	29.22	8.00e-107	382.00
IUUC-Vpa-130429	Vicugna pacos	67.60	0.00e+00	1120.00
IUUC-Vvi-131071	Vitis vinifera	30.42	2.00e-83	305.00
IUUC-Xtr-131762	Xenopus tropicalis	68.95	0.00e+00	1920.00
IUUC-Xma-133693	Xiphophorus maculatus	84.86	0.00e+00	2643.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence