iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028453

UUCD1 version

UUC-DaR-00181

Ensembl Protein ID

ENSDARP00000101197.3

UniProt Accession

B0UY40; B0UY40_DANRE

Genbank Protein ID

CAQ15481.1; CAQ15481.1

Protein Name

Novel protein similar to vertebrate ring finger and WD repeat domain 2 (RFWD2, zgc:163067); Ring finger and WD repeat domain 2

Genbank Nucleotide ID

CR391976; CR388403

Gene Name

rfwd2; DKEY-39F8.2; DKEY-39F8.2-001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000079329.3	ENSDART00000113609.3	ENSDARP00000101197.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-24	83.7	475	505
E3 activity/RING/RING	4.00e-06	28.2	98	136

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWD 29
           H+ + ++++f    + +ll+sGsdD ++k+W+
   Q: 475  HEKRCWSVDFnlmdP-KLLASGSDDAKVKLWS 505
           777889999999633.99*************9 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++++  + + CgH f+ +C+ +          + rCP C+
   Q: 98   CPICFEMIEE-AHMTKCGHSFCYKCIRQS------LEDSNRCPKCN 136
           ********99.**************9555......899999****6 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSSTRQQQQQ QSGGAAGSVP GTSSGSLCSL SSSGGTGGAN SGNSAAQNGS SSGNGVSSRT 60
LGSVADGQSA RLGSLSRKRP LYNGLINPYE DKSNDFVCPI CFEMIEEAHM TKCGHSFCYK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACAAATCTC TGCGGAGTTG CATATCTACA TTAGCATCGA GCAGACCTAA ATGCGAGCCT 60
TCTGCATGCA GAAAAAGCAC CTCACTTGTG AAGAAATTTG CGCCTTTCAG TCCTAGCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	40.09	1.00e-128	453.00
IUUC-Aml-001265	Ailuropoda melanoleuca	88.02	0.00e+00	1112.00
IUUC-Atr-002460	Amborella trichopoda	39.38	1.00e-124	440.00
IUUC-Apl-003796	Anas platyrhynchos	87.56	0.00e+00	1049.00
IUUC-Aca-005078	Anolis carolinensis	87.96	0.00e+00	1102.00
IUUC-Aly-006014	Arabidopsis lyrata	39.48	7.00e-132	464.00
IUUC-Ath-007636	Arabidopsis thaliana	39.54	1.00e-131	464.00
IUUC-Ame-011176	Astyanax mexicanus	78.64	9.00e-85	307.00
IUUC-Bta-012595	Bos taurus	88.20	0.00e+00	1117.00
IUUC-Bdi-014152	Brachypodium distachyon	39.23	2.00e-128	452.00
IUUC-Bol-016380	Brassica oleracea	39.22	1.00e-130	460.00
IUUC-Bra-017690	Brassica rapa	38.59	4.00e-126	445.00
IUUC-Cja-018926	Callithrix jacchus	88.04	0.00e+00	1115.00
IUUC-Cfa-021088	Canis familiaris	87.72	0.00e+00	1112.00
IUUC-Cpo-022442	Cavia porcellus	87.13	0.00e+00	1077.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	33.94	3.00e-33	135.00
IUUC-Csa-024119	Chlorocebus sabaeus	87.72	0.00e+00	1109.00
IUUC-Cho-024883	Choloepus hoffmanni	64.26	2.00e-102	367.00
IUUC-Cin-025375	Ciona intestinalis	54.10	0.00e+00	672.00
IUUC-Cme-027350	Cyanidioschyzon merolae	41.08	9.00e-81	295.00
IUUC-Dno-029887	Dasypus novemcinctus	88.20	0.00e+00	1115.00
IUUC-Dor-031110	Dipodomys ordii	82.61	0.00e+00	809.00
IUUC-Ete-033016	Echinops telfairi	75.44	0.00e+00	922.00
IUUC-Eca-034403	Equus caballus	87.65	0.00e+00	1040.00
IUUC-Eeu-034690	Erinaceus europaeus	73.21	0.00e+00	865.00
IUUC-Fca-036475	Felis catus	87.54	0.00e+00	1044.00
IUUC-Fal-037189	Ficedula albicollis	88.70	0.00e+00	1088.00
IUUC-Gmo-039245	Gadus morhua	88.56	0.00e+00	1097.00
IUUC-Gga-040806	Gallus gallus	88.39	0.00e+00	1118.00
IUUC-Gac-042177	Gasterosteus aculeatus	89.91	0.00e+00	1149.00
IUUC-Gma-044187	Glycine max	39.60	3.00e-125	442.00
IUUC-Ggo-044430	Gorilla gorilla	84.97	0.00e+00	803.00
IUUC-Hsa-045853	Homo sapiens	88.04	0.00e+00	1112.00
IUUC-Hvu-047750	Hordeum vulgare	37.37	2.00e-97	351.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	96.25	6.00e-140	489.00
IUUC-Lch-050420	Latimeria chalumnae	89.92	0.00e+00	1120.00
IUUC-Lpe-051219	Leersia perrieri	38.69	3.00e-123	436.00
IUUC-Loc-052728	Lepisosteus oculatus	94.16	0.00e+00	1134.00
IUUC-Laf-053775	Loxodonta africana	87.80	0.00e+00	1110.00
IUUC-Meu-056595	Macropus eugenii	70.96	5.00e-164	571.00
IUUC-Mtr-058555	Medicago truncatula	40.92	2.00e-133	469.00
IUUC-Mga-059646	Meleagris gallopavo	87.44	0.00e+00	1049.00
IUUC-Mmr-060990	Microcebus murinus	88.12	0.00e+00	1111.00
IUUC-Mdo-062287	Monodelphis domestica	88.04	0.00e+00	1117.00
IUUC-Mmu-064097	Mus musculus	87.88	0.00e+00	1113.00
IUUC-Mac-065240	Musa acuminata	41.01	4.00e-132	465.00
IUUC-Mpu-066612	Mustela putorius furo	87.44	0.00e+00	1047.00
IUUC-Mlu-067967	Myotis lucifugus	86.07	0.00e+00	1048.00
IUUC-Nle-069543	Nomascus leucogenys	88.04	0.00e+00	1116.00
IUUC-Opr-070366	Ochotona princeps	73.56	2.00e-180	625.00
IUUC-Ont-071522	Oreochromis niloticus	90.94	0.00e+00	1146.00
IUUC-Oan-073409	Ornithorhynchus anatinus	87.59	0.00e+00	1045.00
IUUC-Ocu-073756	Oryctolagus cuniculus	87.31	0.00e+00	1076.00
IUUC-Oba-075149	Oryza barthii	39.29	9.00e-126	445.00
IUUC-Obr-076563	Oryza brachyantha	39.78	2.00e-126	446.00
IUUC-Ogl-077701	Oryza glaberrima	39.32	1.00e-126	446.00
IUUC-Ogu-078383	Oryza glumaepatula	39.32	1.00e-126	446.00
IUUC-Oin-079965	Oryza indica	37.62	1.00e-111	397.00
IUUC-Olo-080639	Oryza longistaminata	38.66	2.00e-124	439.00
IUUC-Ome-081821	Oryza meridionalis	39.02	2.00e-114	407.00
IUUC-Oni-082622	Oryza nivara	39.32	1.00e-126	446.00
IUUC-Opu-083295	Oryza punctata	39.22	1.00e-126	447.00
IUUC-Oru-084661	Oryza rufipogon	39.32	1.00e-126	446.00
IUUC-Osa-085766	Oryza sativa	39.32	1.00e-126	446.00
IUUC-Ola-086727	Oryzias latipes	91.63	0.00e+00	1164.00
IUUC-Olu-087702	Ostreococcus lucimarinus	42.99	4.00e-69	254.00
IUUC-Oga-088215	Otolemur garnettii	85.94	0.00e+00	1087.00
IUUC-Oar-089880	Ovis aries	87.68	0.00e+00	1080.00
IUUC-Ptr-090597	Pan troglodytes	88.04	0.00e+00	1112.00
IUUC-Pan-091987	Papio anubis	88.20	0.00e+00	1118.00
IUUC-Psi-094033	Pelodiscus sinensis	89.02	0.00e+00	1076.00
IUUC-Pma-094587	Petromyzon marinus	69.93	0.00e+00	812.00
IUUC-Ppa-095475	Physcomitrella patens	39.05	5.00e-132	465.00
IUUC-Pfo-097388	Poecilia formosa	89.18	0.00e+00	1128.00
IUUC-Pab-098029	Pongo abelii	88.04	0.00e+00	1113.00
IUUC-Pop-100085	Populus trichocarpa	38.19	1.00e-110	393.00
IUUC-Pca-100846	Procavia capensis	81.98	0.00e+00	1026.00
IUUC-Ppe-101250	Prunus persica	37.40	7.00e-121	427.00
IUUC-Pva-102407	Pteropus vampyrus	87.88	0.00e+00	1103.00
IUUC-Rno-105312	Rattus norvegicus	87.88	0.00e+00	1112.00
IUUC-Sha-106514	Sarcophilus harrisii	93.18	0.00e+00	749.00
IUUC-Smo-109418	Selaginella moellendorffii	41.19	3.00e-130	459.00
IUUC-Sit-110248	Setaria italica	39.13	8.00e-127	447.00
IUUC-Sly-110964	Solanum lycopersicum	40.71	2.00e-128	452.00
IUUC-Stu-112882	Solanum tuberosum	40.80	3.00e-129	456.00
IUUC-Sar-113230	Sorex araneus	65.10	0.00e+00	733.00
IUUC-Sbi-113962	Sorghum bicolor	37.61	2.00e-122	433.00
IUUC-Ssc-115987	Sus scrofa	79.75	2.00e-140	492.00
IUUC-Tgu-116471	Taeniopygia guttata	87.96	0.00e+00	1111.00
IUUC-Tru-118231	Takifugu rubripes	90.81	0.00e+00	1102.00
IUUC-Tsy-119415	Tarsius syrichta	87.69	0.00e+00	1052.00
IUUC-Tni-120893	Tetraodon nigroviridis	90.50	0.00e+00	1097.00
IUUC-Tca-121703	Theobroma cacao	40.12	1.00e-128	454.00
IUUC-Tae-125440	Triticum aestivum	40.49	2.00e-135	476.00
IUUC-Tur-126557	Triticum urartu	40.97	1.00e-130	460.00
IUUC-Tbe-127253	Tupaia belangeri	65.18	0.00e+00	771.00
IUUC-Ttr-129100	Tursiops truncatus	86.36	0.00e+00	1022.00
IUUC-Vpa-130613	Vicugna pacos	82.20	0.00e+00	980.00
IUUC-Vvi-131386	Vitis vinifera	38.82	2.00e-122	433.00
IUUC-Xtr-132033	Xenopus tropicalis	85.69	0.00e+00	1135.00
IUUC-Xma-133421	Xiphophorus maculatus	88.58	0.00e+00	1127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence