iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-118231

UUCD1 version

UUC-TaR-00242

Ensembl Protein ID

ENSTRUP00000012617.1

UniProt Accession

H2SJN4; H2SJN4_TAKRU

Protein Name

Uncharacterized protein

Gene Name

rfwd2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000005262.1	ENSTRUT00000012678.1	ENSTRUP00000012617.1
ENSTRUG00000005262.1	ENSTRUT00000012679.1	ENSTRUP00000012618.1
ENSTRUG00000005262.1	ENSTRUT00000012680.1	ENSTRUP00000012619.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-06	28.5	110	148
E3 adaptor/Cullin RING/DCX/DWD	6.40e-24	84.2	442	472

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++++  + + CgH f+++C+ +          + rCP C+
   Q: 110  CPICFEMIEE-AHMTKCGHSFCFKCIRQS------LEDSNRCPKCN 148
           ********99.**************9555......899999****6 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           +++++c+++     +ll+s+ + gt+ +WD 
   Q: 442  NSKISCISWssYHkNLLASSDYEGTVILWDG 472
           689******9622599**************5 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MSGNRPQQNA GGASSVPGTS SGTSNSNGGG SNAAISNGNN SGTVVPSRTL AAASGLSVPT 60
LAAVPSGRGG FASLSRPSGS SGSRKKAHHQ TPLYNGLLNS YEDKSNDFVC PICFEMIEEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGGCA ACCGGCCACA GCAAAATGCT GGTGGGGCGA GTTCTGTGCC CGGCACAAGC 60
AGCGGTACCA GCAATTCAAA CGGTGGTGGA TCCAACGCCG CCATCAGTAA CGGTAACAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

tru:101074435

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	40.84	2.00e-130	459.00
IUUC-Aml-001265	Ailuropoda melanoleuca	88.89	0.00e+00	1104.00
IUUC-Atr-002460	Amborella trichopoda	39.57	8.00e-125	441.00
IUUC-Apl-003796	Anas platyrhynchos	87.82	0.00e+00	1044.00
IUUC-Aca-005078	Anolis carolinensis	89.40	0.00e+00	1103.00
IUUC-Aly-006014	Arabidopsis lyrata	39.48	2.00e-130	459.00
IUUC-Ath-007636	Arabidopsis thaliana	39.60	2.00e-129	456.00
IUUC-Ame-011176	Astyanax mexicanus	80.11	1.00e-76	280.00
IUUC-Bta-012595	Bos taurus	88.96	0.00e+00	1110.00
IUUC-Bdi-014152	Brachypodium distachyon	40.25	6.00e-129	454.00
IUUC-Bol-016380	Brassica oleracea	40.24	4.00e-131	461.00
IUUC-Bra-017690	Brassica rapa	38.69	1.00e-122	433.00
IUUC-Cja-018926	Callithrix jacchus	89.12	0.00e+00	1115.00
IUUC-Cfa-021088	Canis familiaris	88.47	0.00e+00	1107.00
IUUC-Cpo-022442	Cavia porcellus	87.73	0.00e+00	1070.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	33.57	5.00e-33	134.00
IUUC-Csa-024119	Chlorocebus sabaeus	88.47	0.00e+00	1103.00
IUUC-Cho-024883	Choloepus hoffmanni	64.92	9.00e-104	371.00
IUUC-Cin-025375	Ciona intestinalis	55.03	0.00e+00	679.00
IUUC-Cme-027350	Cyanidioschyzon merolae	41.51	2.00e-81	297.00
IUUC-Dre-028453	Danio rerio	91.61	0.00e+00	1123.00
IUUC-Dno-029887	Dasypus novemcinctus	88.98	0.00e+00	1112.00
IUUC-Dor-031110	Dipodomys ordii	82.67	0.00e+00	810.00
IUUC-Ete-033016	Echinops telfairi	77.31	0.00e+00	930.00
IUUC-Eca-034403	Equus caballus	87.91	0.00e+00	1034.00
IUUC-Eeu-034690	Erinaceus europaeus	73.87	0.00e+00	863.00
IUUC-Fca-036475	Felis catus	87.63	0.00e+00	1038.00
IUUC-Fal-037189	Ficedula albicollis	88.96	0.00e+00	1082.00
IUUC-Gmo-039245	Gadus morhua	84.52	0.00e+00	1140.00
IUUC-Gga-040806	Gallus gallus	88.98	0.00e+00	1116.00
IUUC-Gac-042177	Gasterosteus aculeatus	88.70	0.00e+00	1187.00
IUUC-Gma-044187	Glycine max	39.51	2.00e-126	446.00
IUUC-Ggo-044430	Gorilla gorilla	85.22	0.00e+00	792.00
IUUC-Hsa-045853	Homo sapiens	88.80	0.00e+00	1107.00
IUUC-Hvu-047750	Hordeum vulgare	38.76	6.00e-97	349.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	94.17	1.00e-137	481.00
IUUC-Lch-050420	Latimeria chalumnae	89.03	0.00e+00	1106.00
IUUC-Lpe-051219	Leersia perrieri	39.72	3.00e-125	442.00
IUUC-Loc-052728	Lepisosteus oculatus	88.37	0.00e+00	1107.00
IUUC-Laf-053775	Loxodonta africana	88.09	0.00e+00	1108.00
IUUC-Meu-056595	Macropus eugenii	71.70	9.00e-163	566.00
IUUC-Mtr-058555	Medicago truncatula	41.24	4.00e-133	468.00
IUUC-Mga-059646	Meleagris gallopavo	87.69	0.00e+00	1045.00
IUUC-Mmr-060990	Microcebus murinus	88.89	0.00e+00	1104.00
IUUC-Mdo-062287	Monodelphis domestica	88.82	0.00e+00	1113.00
IUUC-Mmu-064097	Mus musculus	88.98	0.00e+00	1112.00
IUUC-Mac-065057	Musa acuminata	41.34	1.00e-126	446.00
IUUC-Mpu-066612	Mustela putorius furo	87.69	0.00e+00	1042.00
IUUC-Mlu-067967	Myotis lucifugus	86.14	0.00e+00	1041.00
IUUC-Nle-069543	Nomascus leucogenys	88.80	0.00e+00	1110.00
IUUC-Opr-070366	Ochotona princeps	72.56	3.00e-177	614.00
IUUC-Ont-071522	Oreochromis niloticus	94.72	0.00e+00	1229.00
IUUC-Oan-073409	Ornithorhynchus anatinus	87.84	0.00e+00	1040.00
IUUC-Ocu-073756	Oryctolagus cuniculus	88.76	0.00e+00	1078.00
IUUC-Oba-075149	Oryza barthii	40.19	1.00e-127	451.00
IUUC-Obr-076563	Oryza brachyantha	40.52	7.00e-128	451.00
IUUC-Ogl-077701	Oryza glaberrima	40.22	3.00e-128	452.00
IUUC-Ogu-078383	Oryza glumaepatula	40.22	3.00e-128	452.00
IUUC-Oin-079965	Oryza indica	38.52	3.00e-114	405.00
IUUC-Olo-080639	Oryza longistaminata	39.30	2.00e-126	446.00
IUUC-Ome-081821	Oryza meridionalis	40.20	7.00e-117	415.00
IUUC-Oni-082622	Oryza nivara	40.22	3.00e-128	452.00
IUUC-Opu-083295	Oryza punctata	40.03	2.00e-128	453.00
IUUC-Oru-084661	Oryza rufipogon	40.22	3.00e-128	452.00
IUUC-Osa-085766	Oryza sativa	40.22	3.00e-128	452.00
IUUC-Ola-086727	Oryzias latipes	92.31	0.00e+00	1228.00
IUUC-Olu-087702	Ostreococcus lucimarinus	42.68	9.00e-69	253.00
IUUC-Oga-088215	Otolemur garnettii	86.67	0.00e+00	1080.00
IUUC-Oar-089880	Ovis aries	88.46	0.00e+00	1074.00
IUUC-Ptr-090597	Pan troglodytes	88.80	0.00e+00	1107.00
IUUC-Pan-091987	Papio anubis	88.96	0.00e+00	1112.00
IUUC-Psi-094033	Pelodiscus sinensis	89.29	0.00e+00	1070.00
IUUC-Pma-094587	Petromyzon marinus	70.24	0.00e+00	808.00
IUUC-Ppa-095401	Physcomitrella patens	39.85	8.00e-131	461.00
IUUC-Pfo-097388	Poecilia formosa	89.62	0.00e+00	1173.00
IUUC-Pab-098029	Pongo abelii	88.80	0.00e+00	1108.00
IUUC-Pop-100085	Populus trichocarpa	38.40	2.00e-109	390.00
IUUC-Pca-100846	Procavia capensis	82.33	0.00e+00	1026.00
IUUC-Ppe-101250	Prunus persica	38.65	3.00e-121	429.00
IUUC-Pva-102407	Pteropus vampyrus	88.64	0.00e+00	1097.00
IUUC-Rno-105312	Rattus norvegicus	88.96	0.00e+00	1108.00
IUUC-Sha-106514	Sarcophilus harrisii	94.35	0.00e+00	745.00
IUUC-Smo-109418	Selaginella moellendorffii	41.09	6.00e-133	468.00
IUUC-Sit-110248	Setaria italica	40.47	3.00e-128	452.00
IUUC-Sly-110964	Solanum lycopersicum	39.72	5.00e-128	451.00
IUUC-Stu-112882	Solanum tuberosum	40.31	6.00e-129	454.00
IUUC-Sar-113230	Sorex araneus	66.05	0.00e+00	735.00
IUUC-Sbi-113962	Sorghum bicolor	38.43	8.00e-124	437.00
IUUC-Ssc-115987	Sus scrofa	79.68	8.00e-136	476.00
IUUC-Tgu-116471	Taeniopygia guttata	88.74	0.00e+00	1108.00
IUUC-Tsy-119415	Tarsius syrichta	87.94	0.00e+00	1048.00
IUUC-Tni-120893	Tetraodon nigroviridis	98.56	0.00e+00	1185.00
IUUC-Tca-121703	Theobroma cacao	41.30	4.00e-131	461.00
IUUC-Tae-125317	Triticum aestivum	40.93	2.00e-137	482.00
IUUC-Tur-126557	Triticum urartu	41.04	5.00e-133	468.00
IUUC-Tbe-127253	Tupaia belangeri	65.32	0.00e+00	767.00
IUUC-Ttr-129100	Tursiops truncatus	86.60	0.00e+00	1018.00
IUUC-Vpa-130613	Vicugna pacos	81.91	0.00e+00	972.00
IUUC-Vvi-130880	Vitis vinifera	40.10	1.00e-123	437.00
IUUC-Xtr-132033	Xenopus tropicalis	85.24	0.00e+00	1132.00
IUUC-Xma-133421	Xiphophorus maculatus	89.32	0.00e+00	1169.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence