iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nle-069168

Ensembl Protein ID

ENSNLEP00000014436.1

UniProt Accession

G1RMH2; G1RMH2_NOMLE

Genbank Protein ID

ENSNLEP00000014436

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01197101

Gene Name

TNRC6A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000011851.2	ENSNLET00000015154.2	ENSNLEP00000014436.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	34.10	5.00e-31	134.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

RDLVQEEEQL MEEKKKKKDD KKKKEAAQKK ATEQKIKVPE QIKPSVSQPQ PANSNNGTST 60
ATSTNNNAKR ATANNQQPQQ QPQQQPQQQQ QQQQQPQQQP QQQPPQPQPQ QQPQQQPQAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGATTTAG TGCAAGAAGA AGAACAGTTG ATGGAAGAAA AGAAAAAGAA AAAAGACGAC 60
AAGAAAAAGA AGGAAGCTGC TCAAAAGAAG GTAGTATGTG TGTAAACTAT TTATATTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033501--TNRC6A

Pfam

PF10427--Ago_hook
PF12938--M_domain
PF16608--TNRC6-PABC_bdg

Gene Ontology

GO:0005794--C:Golgi apparatus
GO:0035068--C:micro-ribonucleoprotein complex
GO:0005654--C:nucleoplasm
GO:0000932--C:P-body
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0035278--P:miRNA mediated inhibition of translation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	96.40	0.00e+00	2974.00
IUUC-Apl-003191	Anas platyrhynchos	44.53	0.00e+00	736.00
IUUC-Aca-004717	Anolis carolinensis	43.38	0.00e+00	694.00
IUUC-Ame-010681	Astyanax mexicanus	41.08	7.00e-71	263.00
IUUC-Bta-012915	Bos taurus	91.91	0.00e+00	2802.00
IUUC-Cja-019614	Callithrix jacchus	39.32	6.00e-105	376.00
IUUC-Cfa-020452	Canis familiaris	93.62	0.00e+00	2889.00
IUUC-Cpo-021452	Cavia porcellus	41.95	0.00e+00	660.00
IUUC-Csa-023169	Chlorocebus sabaeus	98.69	0.00e+00	3028.00
IUUC-Cho-024655	Choloepus hoffmanni	90.88	0.00e+00	2197.00
IUUC-Dre-028059	Danio rerio	47.55	2.00e-78	288.00
IUUC-Dno-029734	Dasypus novemcinctus	93.75	0.00e+00	2905.00
IUUC-Dor-030671	Dipodomys ordii	95.92	0.00e+00	2000.00
IUUC-Dme-032014	Drosophila melanogaster	33.42	1.00e-26	115.00
IUUC-Ete-032774	Echinops telfairi	46.50	5.00e-84	306.00
IUUC-Eca-033866	Equus caballus	42.83	2.00e-179	624.00
IUUC-Eeu-034572	Erinaceus europaeus	46.40	6.00e-41	163.00
IUUC-Fal-036856	Ficedula albicollis	40.50	0.00e+00	669.00
IUUC-Gga-040531	Gallus gallus	42.88	0.00e+00	656.00
IUUC-Gac-041681	Gasterosteus aculeatus	42.86	1.00e-74	275.00
IUUC-Ggo-045143	Gorilla gorilla	41.62	3.00e-100	360.00
IUUC-Hsa-045913	Homo sapiens	41.42	3.00e-101	363.00
IUUC-Lch-049619	Latimeria chalumnae	68.02	0.00e+00	2107.00
IUUC-Loc-052289	Lepisosteus oculatus	48.95	2.00e-85	311.00
IUUC-Laf-053607	Loxodonta africana	41.02	8.00e-180	625.00
IUUC-Mcc-055342	Macaca mulatta	38.83	2.00e-100	361.00
IUUC-Meu-056275	Macropus eugenii	88.26	0.00e+00	1381.00
IUUC-Mga-059241	Meleagris gallopavo	80.59	0.00e+00	2513.00
IUUC-Mvi-060308	Microbotryum violaceum	28.33	5.20e-01	29.30
IUUC-Mmr-061348	Microcebus murinus	94.88	0.00e+00	2932.00
IUUC-Mdo-062155	Monodelphis domestica	41.99	2.00e-116	414.00
IUUC-Mmu-064259	Mus musculus	94.28	0.00e+00	2201.00
IUUC-Mpu-066534	Mustela putorius furo	81.33	0.00e+00	2363.00
IUUC-Mlu-067834	Myotis lucifugus	92.81	0.00e+00	2908.00
IUUC-Opr-070976	Ochotona princeps	35.52	6.00e-91	329.00
IUUC-Ocu-073749	Oryctolagus cuniculus	94.01	0.00e+00	2859.00
IUUC-Oga-088116	Otolemur garnettii	96.79	0.00e+00	3001.00
IUUC-Oar-090041	Ovis aries	91.96	0.00e+00	2681.00
IUUC-Ptr-091135	Pan troglodytes	41.38	9.00e-97	348.00
IUUC-Pan-092665	Papio anubis	38.94	1.00e-100	362.00
IUUC-Psi-093057	Pelodiscus sinensis	42.90	0.00e+00	669.00
IUUC-Pma-094508	Petromyzon marinus	39.94	3.00e-40	160.00
IUUC-Pfo-097115	Poecilia formosa	37.47	4.00e-33	136.00
IUUC-Pab-097935	Pongo abelii	98.47	0.00e+00	3026.00
IUUC-Pca-100481	Procavia capensis	45.86	2.00e-76	281.00
IUUC-Pva-102376	Pteropus vampyrus	42.36	4.00e-63	237.00
IUUC-Rno-105508	Rattus norvegicus	91.39	0.00e+00	2821.00
IUUC-Sar-113036	Sorex araneus	44.02	4.00e-40	160.00
IUUC-Ssc-115574	Sus scrofa	45.76	2.00e-61	231.00
IUUC-Tgu-117233	Taeniopygia guttata	39.52	0.00e+00	668.00
IUUC-Tru-117725	Takifugu rubripes	39.11	4.00e-118	419.00
IUUC-Tsy-118786	Tarsius syrichta	35.19	7.00e-83	303.00
IUUC-Tbe-127551	Tupaia belangeri	94.28	0.00e+00	2808.00
IUUC-Ttr-128518	Tursiops truncatus	41.84	0.00e+00	640.00
IUUC-Vpa-130230	Vicugna pacos	85.38	0.00e+00	1164.00
IUUC-Xtr-132265	Xenopus tropicalis	36.96	2.00e-92	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence