iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019902

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACFV01135343

Gene Name

RNF5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000006298.1	ENSCJAT00000012228.1	ENSCJAP00000011592.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.40e-06	27.8	27	68

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle   +  +v  CgH+++  Cl++w         ++ CP+C+
   Q: 27   CNICLETAWE-AVVSVCGHLYCWPCLHQW---LETRPERQECPVCK 68
           99****9977.77799*************...555888889****7 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MAAAEEEDGG PEGPNRERGG AGATFDCNIC LETAWEAVVS VCGHLYCWPC LHQWLETRPE 60
RQECPVCKAG ISREKVVPLY GRGSQKPQDP RLKTPPRPQG QRPAPESRGG FQPFGDTGGF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAACAAAAC CTGTAATGGC AGCAGCAGAG GAGGAGGACG GGGGCCCCGA AGGGCCAAAT 60
CGCGAGCGGG GCGGGGCTGG CGCGACCTTC GACTGTAATA TATGTTTGGA GACTGCCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0070936--P:protein K48-linked ubiquitination
GO:0070534--P:protein K63-linked ubiquitination

KEGG

cjc:100411196

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001417	Ailuropoda melanoleuca	97.64	3.00e-70	257.00
IUUC-Aca-004254	Anolis carolinensis	73.56	9.00e-35	139.00
IUUC-Ame-011316	Astyanax mexicanus	69.48	4.00e-56	210.00
IUUC-Bta-013109	Bos taurus	97.87	8.00e-79	285.00
IUUC-Bdi-014313	Brachypodium distachyon	53.49	8.00e-23	100.00
IUUC-Cfa-020079	Canis familiaris	97.16	5.00e-78	283.00
IUUC-Cpo-021320	Cavia porcellus	91.62	9.00e-86	308.00
IUUC-Csa-023595	Chlorocebus sabaeus	97.16	2.00e-78	284.00
IUUC-Cme-027164	Cyanidioschyzon merolae	32.89	3.00e-17	82.00
IUUC-Dre-027716	Danio rerio	72.38	4.00e-41	160.00
IUUC-Dno-029843	Dasypus novemcinctus	85.11	3.00e-55	207.00
IUUC-Dor-030170	Dipodomys ordii	96.77	3.00e-68	250.00
IUUC-Eca-033642	Equus caballus	98.17	1.00e-91	328.00
IUUC-Eeu-034778	Erinaceus europaeus	99.15	2.00e-64	236.00
IUUC-Fca-036326	Felis catus	95.74	1.00e-77	281.00
IUUC-Fso-038195	Fusarium solani	40.91	6.00e-10	58.50
IUUC-Gac-042258	Gasterosteus aculeatus	78.40	1.00e-54	205.00
IUUC-Ggo-045474	Gorilla gorilla	97.87	1.00e-78	285.00
IUUC-Hsa-046046	Homo sapiens	97.87	7.00e-79	285.00
IUUC-Itr-048037	Ictidomys tridecemlineatus	96.67	3.00e-83	300.00
IUUC-Lch-050367	Latimeria chalumnae	71.67	5.00e-46	176.00
IUUC-Laf-053395	Loxodonta africana	95.74	4.00e-77	280.00
IUUC-Mcc-054833	Macaca mulatta	97.16	2.00e-78	284.00
IUUC-Meu-055984	Macropus eugenii	83.54	2.00e-34	138.00
IUUC-Mtr-058096	Medicago truncatula	51.09	3.00e-24	104.00
IUUC-Mdo-062437	Monodelphis domestica	86.59	3.00e-81	293.00
IUUC-Mmu-064159	Mus musculus	95.77	4.00e-78	283.00
IUUC-Mac-065053	Musa acuminata	56.47	6.00e-23	101.00
IUUC-Mlu-067689	Myotis lucifugus	90.74	3.00e-82	296.00
IUUC-Nle-069705	Nomascus leucogenys	97.87	7.00e-79	285.00
IUUC-Opr-070392	Ochotona princeps	74.58	6.00e-19	86.30
IUUC-Ont-072482	Oreochromis niloticus	72.73	6.00e-57	213.00
IUUC-Ocu-074208	Oryctolagus cuniculus	96.45	2.00e-77	281.00
IUUC-Oba-075461	Oryza barthii	51.65	2.00e-23	102.00
IUUC-Olo-080378	Oryza longistaminata	53.49	1.00e-22	99.80
IUUC-Opu-083362	Oryza punctata	56.98	7.00e-25	107.00
IUUC-Ola-086507	Oryzias latipes	67.27	2.00e-59	221.00
IUUC-Oga-088912	Otolemur garnettii	98.58	3.00e-79	287.00
IUUC-Oar-090284	Ovis aries	94.63	1.00e-70	258.00
IUUC-Ptr-090919	Pan troglodytes	97.62	1.00e-69	254.00
IUUC-Pan-092843	Papio anubis	97.16	2.00e-78	284.00
IUUC-Pfo-096818	Poecilia formosa	77.78	5.00e-55	207.00
IUUC-Pab-098244	Pongo abelii	97.16	2.00e-78	284.00
IUUC-Pca-100319	Procavia capensis	96.34	2.00e-81	294.00
IUUC-Pva-102249	Pteropus vampyrus	92.91	7.00e-72	262.00
IUUC-Rno-106042	Rattus norvegicus	95.77	4.00e-78	283.00
IUUC-Smo-109079	Selaginella moellendorffii	46.99	4.00e-22	99.00
IUUC-Sit-109934	Setaria italica	53.49	2.00e-22	99.40
IUUC-Sly-110917	Solanum lycopersicum	51.76	3.00e-24	104.00
IUUC-Ssc-115934	Sus scrofa	98.58	3.00e-79	287.00
IUUC-Tru-118679	Takifugu rubripes	61.73	3.00e-23	100.00
IUUC-Tsy-119615	Tarsius syrichta	94.37	2.00e-74	270.00
IUUC-Tae-124257	Triticum aestivum	52.87	2.00e-22	99.40
IUUC-Tur-126443	Triticum urartu	52.87	1.00e-22	99.40
IUUC-Tbe-127773	Tupaia belangeri	95.74	2.00e-75	274.00
IUUC-Ttr-128690	Tursiops truncatus	98.29	5.00e-64	236.00
IUUC-Vvi-131225	Vitis vinifera	58.82	4.00e-25	107.00
IUUC-Xtr-132608	Xenopus tropicalis	79.17	2.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence