iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cja-019487

Ensembl Protein ID

ENSCJAP00000002814.2

UniProt Accession

F7IBI3; F7IBI3_CALJA

Genbank Protein ID

JAB02586.1; JAB15631.1; JAB25175.1; JAB39242.1; JAB42128.1

Protein Name

Ubiquitin fusion degradation protein 1 homolog isoform A

Genbank Nucleotide ID

ACFV01156386; GAMS01007505; GAMR01008757; GAMQ01002609; GAMP01010627

Gene Name

UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000001566.2	ENSCJAT00000002969.2	ENSCJAP00000002814.2
ENSCJAG00000001566.2	ENSCJAT00000022224.2	ENSCJAP00000021019.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	99.35	3.00e-177	618.00	IUUC-Hsa-046680
UBD/Other/Other	99.35	3.00e-177	618.00	IUUC-Hsa-046680
UBD/Other/Other	37.95	3.00e-52	199.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MFSFNMFDHP IPRVFQNRFS TQYRCFSVSM LAGPNDRSDV EKGGKIIMPP SALDQLSRLN 60
ITYPMLFKLT NKNSDRMTHC GVLEFVADEG ICYLPHWMMQ NLLLEEGGLV QVESVNLQVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTCCGGTG AGCCTCGGGC ATACCGGCTT GGAGCAGCAG CTGCGGCGGC GGCGGGGTGC 60
CATCGTCACG TTCCCCGAGA GAAGCGGCGT CTGCAAGGGG GTGTCCATCA TGGTAAGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

cjc:100409073

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	51.80	3.00e-66	244.00
IUUC-Aml-001398	Ailuropoda melanoleuca	99.35	8.00e-178	615.00
IUUC-Atr-002449	Amborella trichopoda	48.37	2.00e-55	208.00
IUUC-Apl-004065	Anas platyrhynchos	93.51	3.00e-143	500.00
IUUC-Aca-004973	Anolis carolinensis	93.81	1.00e-173	601.00
IUUC-Aly-005501	Arabidopsis lyrata	51.71	4.00e-67	248.00
IUUC-Ath-007324	Arabidopsis thaliana	53.04	6.00e-68	251.00
IUUC-Ago-007918	Ashbya gossypii	38.82	3.00e-54	205.00
IUUC-Acl-008362	Aspergillus clavatus	42.34	3.00e-67	248.00
IUUC-Afl-008690	Aspergillus flavus	54.17	2.00e-64	239.00
IUUC-Afu-008787	Aspergillus fumigatus	43.54	9.00e-66	243.00
IUUC-Ani-009385	Aspergillus nidulans	56.57	4.00e-57	214.00
IUUC-Ang-009709	Aspergillus niger	56.22	5.00e-64	238.00
IUUC-Aor-010240	Aspergillus oryzae	54.17	2.00e-64	239.00
IUUC-Ate-010551	Aspergillus terreus	56.04	7.00e-65	240.00
IUUC-Ame-011417	Astyanax mexicanus	89.29	2.00e-159	554.00
IUUC-Bgr-011986	Blumeria graminis	56.25	7.00e-62	230.00
IUUC-Bta-012559	Bos taurus	97.80	6.00e-129	452.00
IUUC-Bci-013767	Botrytis cinerea	56.08	4.00e-58	218.00
IUUC-Bdi-014336	Brachypodium distachyon	52.00	1.00e-65	243.00
IUUC-Bol-015824	Brassica oleracea	44.41	4.00e-66	244.00
IUUC-Bra-016732	Brassica rapa	44.08	4.00e-66	244.00
IUUC-Cel-018590	Caenorhabditis elegans	40.13	1.00e-49	189.00
IUUC-Cfa-020497	Canis familiaris	99.02	5.00e-178	616.00
IUUC-Cpo-022150	Cavia porcellus	99.02	4.00e-177	613.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	50.66	3.00e-58	218.00
IUUC-Csa-023602	Chlorocebus sabaeus	99.35	1.00e-178	618.00
IUUC-Cin-025594	Ciona intestinalis	57.72	3.00e-93	334.00
IUUC-Csv-026040	Ciona savignyi	55.59	9.00e-95	339.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	48.15	5.00e-52	197.00
IUUC-Cne-026990	Cryptococcus neoformans	42.49	2.00e-39	156.00
IUUC-Cme-027323	Cyanidioschyzon merolae	34.54	2.00e-43	169.00
IUUC-Dre-027987	Danio rerio	87.01	8.00e-154	535.00
IUUC-Dor-030294	Dipodomys ordii	97.39	7.00e-174	602.00
IUUC-Dse-031411	Dothistroma septosporum	38.24	4.00e-57	214.00
IUUC-Dme-031798	Drosophila melanogaster	56.01	3.00e-93	334.00
IUUC-Ete-032432	Echinops telfairi	97.39	4.00e-175	606.00
IUUC-Eca-034427	Equus caballus	99.35	1.00e-178	618.00
IUUC-Eeu-034917	Erinaceus europaeus	70.36	2.00e-111	394.00
IUUC-Fca-035380	Felis catus	99.02	5.00e-178	616.00
IUUC-Fal-037659	Ficedula albicollis	94.70	7.00e-169	585.00
IUUC-Fox-038062	Fusarium oxysporum	44.90	4.00e-21	94.00
IUUC-Fso-038111	Fusarium solani	35.96	2.00e-53	202.00
IUUC-Gmo-039298	Gadus morhua	87.06	6.00e-147	513.00
IUUC-Ggr-039771	Gaeumannomyces graminis	51.03	3.00e-56	212.00
IUUC-Gga-040313	Gallus gallus	95.44	7.00e-173	599.00
IUUC-Gac-042009	Gasterosteus aculeatus	86.13	7.00e-148	516.00
IUUC-Gma-043844	Glycine max	52.70	4.00e-68	251.00
IUUC-Ggo-044639	Gorilla gorilla	88.63	1.00e-172	598.00
IUUC-Hsa-046680	Homo sapiens	99.35	1.00e-178	618.00
IUUC-Hvu-047614	Hordeum vulgare	52.27	4.00e-66	244.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	99.35	8.00e-178	615.00
IUUC-Kpa-049136	Komagataella pastoris	36.57	2.00e-55	209.00
IUUC-Lch-050607	Latimeria chalumnae	88.74	3.00e-156	543.00
IUUC-Lpe-050726	Leersia perrieri	50.23	1.00e-61	230.00
IUUC-Loc-051848	Lepisosteus oculatus	89.64	1.00e-161	561.00
IUUC-Lma-053187	Leptosphaeria maculans	41.64	2.00e-65	243.00
IUUC-Laf-053569	Loxodonta africana	97.41	3.00e-174	603.00
IUUC-Mcc-055275	Macaca mulatta	99.02	9.00e-178	615.00
IUUC-Mor-056967	Magnaporthe oryzae	38.24	3.00e-57	215.00
IUUC-Mpo-057399	Magnaporthe poae	51.55	1.00e-56	213.00
IUUC-Mtr-058353	Medicago truncatula	50.87	8.00e-65	240.00
IUUC-Mla-058830	Melampsora laricipopulina	44.56	1.00e-42	167.00
IUUC-Mga-059803	Meleagris gallopavo	94.66	1.00e-144	504.00
IUUC-Mvi-060456	Microbotryum violaceum	46.81	3.00e-45	176.00
IUUC-Mmr-060573	Microcebus murinus	99.02	5.00e-178	616.00
IUUC-Mdo-062831	Monodelphis domestica	97.07	9.00e-175	605.00
IUUC-Mmu-064302	Mus musculus	98.70	9.00e-177	612.00
IUUC-Mac-064745	Musa acuminata	52.16	2.00e-66	246.00
IUUC-Mpu-065922	Mustela putorius furo	99.02	2.00e-178	617.00
IUUC-Mlu-068236	Myotis lucifugus	98.06	5.00e-176	609.00
IUUC-Nfi-068417	Neosartorya fischeri	43.54	7.00e-66	244.00
IUUC-Ncr-068747	Neurospora crassa	40.75	5.00e-54	204.00
IUUC-Nle-069948	Nomascus leucogenys	88.66	8.00e-174	602.00
IUUC-Opr-070919	Ochotona princeps	83.72	6.00e-140	489.00
IUUC-Ont-071467	Oreochromis niloticus	86.73	7.00e-153	532.00
IUUC-Oan-073436	Ornithorhynchus anatinus	76.36	2.00e-69	254.00
IUUC-Ocu-074427	Oryctolagus cuniculus	98.70	8.00e-169	585.00
IUUC-Oba-075440	Oryza barthii	51.27	2.00e-66	245.00
IUUC-Obr-076275	Oryza brachyantha	51.15	6.00e-60	224.00
IUUC-Ogl-077237	Oryza glaberrima	51.27	2.00e-66	245.00
IUUC-Ogu-078934	Oryza glumaepatula	51.27	2.00e-66	245.00
IUUC-Oin-079475	Oryza indica	51.69	6.00e-67	247.00
IUUC-Olo-080285	Oryza longistaminata	59.64	4.00e-57	213.00
IUUC-Ome-081887	Oryza meridionalis	50.64	3.00e-66	244.00
IUUC-Oni-082064	Oryza nivara	51.69	8.00e-67	246.00
IUUC-Opu-083610	Oryza punctata	50.64	4.00e-66	244.00
IUUC-Oru-084911	Oryza rufipogon	44.27	6.00e-67	247.00
IUUC-Osa-085366	Oryza sativa	51.27	2.00e-66	245.00
IUUC-Ola-086846	Oryzias latipes	76.44	3.00e-139	488.00
IUUC-Olu-087879	Ostreococcus lucimarinus	45.82	5.00e-57	214.00
IUUC-Oga-089017	Otolemur garnettii	98.38	8.00e-176	608.00
IUUC-Oar-089970	Ovis aries	94.44	4.00e-168	583.00
IUUC-Ptr-091147	Pan troglodytes	89.97	1.00e-162	565.00
IUUC-Pan-091757	Papio anubis	91.88	1.00e-159	555.00
IUUC-Psi-093931	Pelodiscus sinensis	95.44	8.00e-173	598.00
IUUC-Pno-094775	Phaeosphaeria nodorum	48.62	1.00e-59	223.00
IUUC-Ppa-095156	Physcomitrella patens	51.34	1.00e-63	236.00
IUUC-Pfo-097295	Poecilia formosa	85.85	6.00e-152	529.00
IUUC-Pab-098537	Pongo abelii	99.35	1.00e-178	618.00
IUUC-Pop-099436	Populus trichocarpa	50.41	4.00e-67	248.00
IUUC-Pca-100631	Procavia capensis	86.09	1.00e-165	575.00
IUUC-Ppe-101259	Prunus persica	50.43	4.00e-66	244.00
IUUC-Pva-102679	Pteropus vampyrus	90.65	1.00e-159	555.00
IUUC-Pgr-103475	Puccinia graminis	45.59	8.00e-45	174.00
IUUC-Ptt-104012	Puccinia triticina	38.73	3.00e-32	132.00
IUUC-Pte-104071	Pyrenophora teres	51.43	3.00e-62	232.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	51.43	3.00e-62	231.00
IUUC-Rno-104858	Rattus norvegicus	98.05	2.00e-176	610.00
IUUC-Sce-106174	Saccharomyces cerevisiae	39.63	1.00e-54	206.00
IUUC-Sha-107075	Sarcophilus harrisii	97.06	1.00e-174	605.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	44.00	7.00e-61	227.00
IUUC-Spo-108259	Schizosaccharomyces pombe	46.32	5.00e-52	197.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	38.06	3.00e-51	195.00
IUUC-Smo-109290	Selaginella moellendorffii	53.71	5.00e-66	244.00
IUUC-Sit-109992	Setaria italica	51.06	1.00e-65	243.00
IUUC-Sly-110858	Solanum lycopersicum	52.02	9.00e-64	236.00
IUUC-Stu-112129	Solanum tuberosum	51.58	3.00e-64	238.00
IUUC-Sar-113061	Sorex araneus	98.37	3.00e-176	610.00
IUUC-Sbi-114882	Sorghum bicolor	44.27	4.00e-66	244.00
IUUC-Sre-115104	Sporisorium reilianum	47.12	2.00e-44	172.00
IUUC-Ssc-115403	Sus scrofa	98.70	4.00e-177	613.00
IUUC-Tgu-117013	Taeniopygia guttata	95.10	8.00e-172	595.00
IUUC-Tru-118307	Takifugu rubripes	87.01	7.00e-149	519.00
IUUC-Tsy-119309	Tarsius syrichta	88.73	1.00e-68	253.00
IUUC-Tni-120209	Tetraodon nigroviridis	86.41	5.00e-147	513.00
IUUC-Tca-121421	Theobroma cacao	51.30	2.00e-67	248.00
IUUC-Tre-122235	Trichoderma reesei	45.64	7.00e-52	197.00
IUUC-Tvi-122421	Trichoderma virens	45.59	2.00e-52	199.00
IUUC-Tae-124587	Triticum aestivum	51.80	2.00e-66	245.00
IUUC-Tur-126353	Triticum urartu	37.50	4.00e-25	109.00
IUUC-Tme-126918	Tuber melanosporum	53.65	3.00e-59	221.00
IUUC-Ttr-129286	Tursiops truncatus	89.32	3.00e-161	560.00
IUUC-Uma-129404	Ustilago maydis	48.17	1.00e-45	177.00
IUUC-Vda-129746	Verticillium dahliae	48.47	3.00e-53	202.00
IUUC-Vpa-130648	Vicugna pacos	98.04	3.00e-24	105.00
IUUC-Vvi-131301	Vitis vinifera	51.74	7.00e-66	243.00
IUUC-Xtr-132583	Xenopus tropicalis	91.21	4.00e-164	570.00
IUUC-Xma-133129	Xiphophorus maculatus	86.17	4.00e-152	530.00
IUUC-Yli-134515	Yarrowia lipolytica	46.19	3.00e-51	195.00
IUUC-Zma-135266	Zea mays	43.53	7.00e-66	243.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence