iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114031

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G039200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g003380	Sb02g003380.1	Sb02g003380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.70e-105	353.8	245	866

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfla 97
           Gl+NlgNtC+mNS +QcL+++p+l +++l  + +++n++np + +gel+ ++ +l+++lw+ ++k + p++++++++ +a++fsg++q+D+qE+la
   Q: 245  GLENLGNTCFMNSSIQCLAHTPKLVDYFLGDYANNINRTNPLGLNGELALAFGELLRSLWT-DRKPIPPHHFKEKIACFAPQFSGFNQHDSQELLA 339
           9**********************************************************85.5679****************************** PP
   S: 98   flldqleeelkkeknkpkeeeeeed...kselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke..... 185
           flld+l+e+l++ k kp+ee+++++   ++e  de ++++  +n+s+i+d+ +gq+ks+++c++c ++s++++pf++lslpvp+  ++ ++     
   Q: 340  FLLDGLHEDLNQVKCKPYEEAKDASgrpDEEVADEYWSNHLARNDSVIVDTCHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPSTAKRVMTvtvfs 435
           ************99999999987762224555666***************************************************99888***** PP
   S: 186  ................................................................................................ 185
                                                                                                           
   Q: 436  tdgsrepcsydvsvpkfgtlsdlvqalsiacllgddeillvtevynnciiryleepsdsvsllrdgdklaayrlpkrhekspfvvfthqyfdehss 531
           ************************************************************************************************ PP
   S: 186  ................................................................................................ 185
                                                                                                           
   Q: 532  ddnltrqmrefeapllaalpetinglslqdiylkllspfrlsnragslnvcmesnsdsidltdatssdsgsnsfqnsqsedgpesshcsaseceim 627
           ************************************************************************************************ PP
   S: 186  ............................................................................................slqd 189
                                                                                                        l+ 
   Q: 628  krpddlcdggsdsnkeaqmeefefylknergdgqlqkieineldlletapsrlhvnvhwlrnaskkyatsmlsnlpeihklelipkgtedsvALHG 723
           ************************************************************************************************ PP
   S: 190  cLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavv 284
           cLe+f kee l  e+++yc+ ckk+q+a kkl+l++lPevL++hLkRfs+++    r+k+++ v+fp + Ldls++ ++++++   +  Y+L+a+ 
   Q: 724  CLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQ--FTRNKLETFVDFPTTdLDLSSYIADKSKQP--SSHYRLYAIS 815
           ************************************************8855..899**********************77665..9********* PP
   S: 285  vHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYkr 337
           +H+G++++GHY+a +++e+gk W++fdD++Vt+++e+++++   s aYvlfY+r
   Q: 816  NHYGNMGGGHYTASIYHEEGKgWYKFDDDYVTPMSEDSIKT---SAAYVLFYRR 866
           *****************99999*******************...********98 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATAATASHP ASASTSGRDA LAASSSSHAA VCLVPFRWWA RVREEEAAGG VQYAATAAAS 60
PSYYGLRLLH SFLHPDLVLR LERGDFRAGD GGGGGRSYAL VPADELSRAL ARQNSGLGLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCACCG CCGCCACCGC CTCCCACCCG GCCTCCGCCT CCACCTCCGG CCGCGACGCC 60
CTCGCCGCAT CATCCTCCTC CCACGCCGCC GTCTGCCTCG TCCCGTTCAG GTACCTTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g003380

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000058	Aegilops tauschii	73.42	0.00e+00	1128.00
IUUC-Apl-003249	Anas platyrhynchos	39.51	3.00e-124	438.00
IUUC-Ame-011064	Astyanax mexicanus	40.00	6.00e-124	437.00
IUUC-Bdi-015062	Brachypodium distachyon	79.98	0.00e+00	1308.00
IUUC-Cpo-022144	Cavia porcellus	40.44	1.00e-120	426.00
IUUC-Gmo-038866	Gadus morhua	41.40	1.00e-119	423.00
IUUC-Hvu-047108	Hordeum vulgare	77.30	0.00e+00	1104.00
IUUC-Lpe-051185	Leersia perrieri	77.46	0.00e+00	1307.00
IUUC-Meu-056742	Macropus eugenii	38.61	8.00e-110	390.00
IUUC-Oba-075553	Oryza barthii	79.09	0.00e+00	1328.00
IUUC-Obr-076410	Oryza brachyantha	77.16	0.00e+00	1084.00
IUUC-Ogl-077583	Oryza glaberrima	79.09	0.00e+00	1328.00
IUUC-Ogu-077990	Oryza glumaepatula	78.43	0.00e+00	1295.00
IUUC-Oin-079300	Oryza indica	78.97	0.00e+00	1323.00
IUUC-Olo-080387	Oryza longistaminata	78.70	0.00e+00	1204.00
IUUC-Ome-081963	Oryza meridionalis	78.22	0.00e+00	1284.00
IUUC-Oni-082303	Oryza nivara	78.31	0.00e+00	1299.00
IUUC-Opu-083770	Oryza punctata	79.32	0.00e+00	1330.00
IUUC-Oru-085141	Oryza rufipogon	78.62	0.00e+00	1288.00
IUUC-Osa-085641	Oryza sativa	78.97	0.00e+00	1323.00
IUUC-Oar-090439	Ovis aries	41.71	1.00e-123	436.00
IUUC-Psi-093942	Pelodiscus sinensis	40.82	5.00e-124	437.00
IUUC-Pva-103244	Pteropus vampyrus	39.78	7.00e-116	410.00
IUUC-Sit-109901	Setaria italica	87.40	0.00e+00	1460.00
IUUC-Tsy-119414	Tarsius syrichta	44.97	2.00e-74	272.00
IUUC-Tae-123874	Triticum aestivum	77.73	0.00e+00	1092.00
IUUC-Tur-126478	Triticum urartu	73.29	0.00e+00	1130.00
IUUC-Ttr-128778	Tursiops truncatus	41.55	5.00e-121	427.00
IUUC-Xma-133550	Xiphophorus maculatus	40.03	9.00e-124	437.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence