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Tag Content
UUCD2 ID IUUC-Ppa-095359
UUCD1 version UUC-PhP-00410
Ensembl Protein ID PP1S197_75V6.1
UniProt Accession A9TB41; A9TB41_PHYPA
Genbank Protein ID EDQ59345.1
Protein Name Predicted protein
Genbank Nucleotide ID DS545086
Gene Name PHYPADRAFT_51117
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S197_75V6 PP1S197_75V6.1 PP1S197_75V6.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.20e-36 123.9 281 318
UBD/Beta-Prp 1.40e-54 186.1 118 297
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v ++++ s+ + ++++s+D tik++D+rt + l
   Q: 281  GHKNTVLSVKWnSNgNWVLTASRDQTIKLYDIRTLKEL 318
           8**********9667*****************998765 PP
   

   UBD/Beta-Prp
   S: 55   vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg 149
           ++ v + p+g  l+tgs+ +   +w+ +++   ++l++h+  v+s+ +s + +++v+G++   i+ w+++ + +    ++ h+++v+ +++++++
   Q: 118  INRVLWTPNGRRLITGSQSGEFTLWNGQSFNFEMILQAHDLAVRSMVWSHNENWMVTGDDGGCIKYWQTNMNNVKA-NKTAHKEAVRDLSFSSTD 211
           6777888999999999999999999999999999999999999999999999999999999999999999999998.999999999999999999 PP
   S: 150  nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnder 236
             + s+s+D+tv++Wd ++ +  r ltg h  +v+s+++++++  lvsg++d+ vklwd +tg+++ tl+gh+++v+sv+  +n+++
   Q: 212  LKFCSCSDDTTVKVWDFARCQEERSLTG-HGWDVKSVDWHPQKALLVSGAKDNLVKLWDAKTGRVLCTLHGHKNTVLSVKWNSNGNW 297
           9999999999999999999999999999.9999999999999999999999999999999999999999999999999999988876 PP
   
Organism Physcomitrella patens
Protein Sequence
(Fasta)
MMEGPQMQQG HDYLRAPPVP AATAASAAPA EFGRPNVIFD GKRMRKPVHR RTVDYSSTVV 60
RYIQNRTWQR DCRDAPALQP TSAAVVDMLP TVAYPDNPAT SFTTKFVHPS TNKVRCSINR 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ppa-095359|E3,WD_repeat;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTAGTCTTAG GAAACCTGCT GTGGAGGAGA GCAGGGCAGG GGATGGCGAA GAGGAGGGAG 60
GTGTAGGTGA TTGAAGGGAA TTGAGAGCGG GGAAGGGAGC AATCTCAGCT GGTTACGATG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ppa-095359|E3,WD_repeat;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0006379--P:mRNA cleavage
KEGG ppp:PHYPADRAFT_51117
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001064 Aegilops tauschii 69.57 4.00e-174 603.00
IUUC-Aml-001363 Ailuropoda melanoleuca 60.69 2.00e-142 499.00
IUUC-Atr-003030 Amborella trichopoda 72.20 0.00e+00 666.00
IUUC-Apl-003409 Anas platyrhynchos 60.90 7.00e-141 494.00
IUUC-Aca-004694 Anolis carolinensis 60.42 6.00e-142 498.00
IUUC-Aly-006063 Arabidopsis lyrata 73.87 0.00e+00 651.00
IUUC-Ath-006583 Arabidopsis thaliana 68.90 0.00e+00 634.00
IUUC-Ago-007805 Ashbya gossypii 45.41 9.00e-92 329.00
IUUC-Acl-008075 Aspergillus clavatus 43.11 3.00e-95 342.00
IUUC-Afl-008582 Aspergillus flavus 45.38 1.00e-93 336.00
IUUC-Afu-008817 Aspergillus fumigatus 43.90 2.00e-82 298.00
IUUC-Ani-009391 Aspergillus nidulans 41.54 1.00e-85 309.00
IUUC-Ang-009750 Aspergillus niger 45.57 1.00e-80 292.00
IUUC-Aor-010085 Aspergillus oryzae 43.00 6.00e-97 347.00
IUUC-Ate-010397 Aspergillus terreus 43.00 3.00e-96 345.00
IUUC-Ame-010741 Astyanax mexicanus 59.29 1.00e-88 320.00
IUUC-Bgr-012169 Blumeria graminis 47.44 2.00e-100 358.00
IUUC-Bta-013265 Bos taurus 60.69 2.00e-142 499.00
IUUC-Bci-013762 Botrytis cinerea 45.38 5.00e-102 364.00
IUUC-Bdi-014849 Brachypodium distachyon 73.56 0.00e+00 644.00
IUUC-Bol-015325 Brassica oleracea 71.02 0.00e+00 632.00
IUUC-Bra-017064 Brassica rapa 71.73 0.00e+00 634.00
IUUC-Cel-018378 Caenorhabditis elegans 50.66 2.00e-117 416.00
IUUC-Cja-019547 Callithrix jacchus 60.69 1.00e-142 500.00
IUUC-Cfa-020031 Canis familiaris 60.69 2.00e-142 499.00
IUUC-Cpo-021554 Cavia porcellus 59.73 1.00e-136 480.00
IUUC-Cre-022830 Chlamydomonas reinhardtii 44.38 2.00e-77 282.00
IUUC-Csa-023146 Chlorocebus sabaeus 60.42 3.00e-142 499.00
IUUC-Cho-024679 Choloepus hoffmanni 56.02 2.00e-127 449.00
IUUC-Cin-025415 Ciona intestinalis 52.70 5.00e-131 461.00
IUUC-Csv-026003 Ciona savignyi 48.57 2.00e-126 445.00
IUUC-Cgl-026391 Colletotrichum gloeosporioides 44.44 4.00e-98 351.00
IUUC-Cne-026983 Cryptococcus neoformans 46.85 3.00e-96 345.00
IUUC-Cme-027147 Cyanidioschyzon merolae 51.68 2.00e-123 434.00
IUUC-Dre-028545 Danio rerio 57.31 1.00e-142 500.00
IUUC-Dno-029677 Dasypus novemcinctus 60.69 9.00e-143 501.00
IUUC-Dse-031371 Dothistroma septosporum 45.14 1.00e-94 339.00
IUUC-Dme-031663 Drosophila melanogaster 59.49 8.00e-144 503.00
IUUC-Ete-032511 Echinops telfairi 53.56 5.00e-120 425.00
IUUC-Eca-034152 Equus caballus 60.69 2.00e-142 499.00
IUUC-Eeu-034560 Erinaceus europaeus 47.76 1.00e-51 197.00
IUUC-Fca-035820 Felis catus 60.69 2.00e-142 499.00
IUUC-Fox-037958 Fusarium oxysporum 44.17 5.00e-100 357.00
IUUC-Fso-038162 Fusarium solani 43.97 3.00e-98 352.00
IUUC-Gmo-039708 Gadus morhua 59.84 1.00e-140 493.00
IUUC-Ggr-040031 Gaeumannomyces graminis 41.77 5.00e-89 321.00
IUUC-Gga-040963 Gallus gallus 60.69 2.00e-142 499.00
IUUC-Gac-041541 Gasterosteus aculeatus 52.92 2.00e-139 489.00
IUUC-Gma-044352 Glycine max 70.88 0.00e+00 657.00
IUUC-Ggo-045564 Gorilla gorilla 60.69 2.00e-142 500.00
IUUC-Hsa-045833 Homo sapiens 60.69 1.00e-142 500.00
IUUC-Hvu-047848 Hordeum vulgare 70.86 1.00e-130 459.00
IUUC-Itr-048083 Ictidomys tridecemlineatus 60.69 2.00e-142 499.00
IUUC-Kpa-049308 Komagataella pastoris 42.48 6.00e-93 333.00
IUUC-Lch-050525 Latimeria chalumnae 60.69 2.00e-142 499.00
IUUC-Lpe-051364 Leersia perrieri 69.34 3.00e-175 608.00
IUUC-Loc-052696 Lepisosteus oculatus 60.70 2.00e-142 499.00
IUUC-Lma-052951 Leptosphaeria maculans 46.83 2.00e-102 365.00
IUUC-Laf-053653 Loxodonta africana 60.69 3.00e-142 499.00
IUUC-Mcc-055797 Macaca mulatta 60.69 1.00e-142 500.00
IUUC-Meu-056331 Macropus eugenii 57.59 1.00e-110 394.00
IUUC-Mor-057168 Magnaporthe oryzae 43.42 7.00e-95 340.00
IUUC-Mpo-057510 Magnaporthe poae 45.15 4.00e-66 244.00
IUUC-Mtr-058032 Medicago truncatula 71.09 0.00e+00 632.00
IUUC-Mla-058852 Melampsora laricipopulina 50.79 1.00e-114 405.00
IUUC-Mga-059311 Meleagris gallopavo 60.69 2.00e-142 499.00
IUUC-Mvi-060544 Microbotryum violaceum 53.78 2.00e-118 419.00
IUUC-Mmr-061143 Microcebus murinus 60.69 1.00e-142 500.00
IUUC-Mdo-061977 Monodelphis domestica 60.69 2.00e-142 499.00
IUUC-Mmu-063922 Mus musculus 60.69 1.00e-142 500.00
IUUC-Mac-064961 Musa acuminata 72.94 0.00e+00 663.00
IUUC-Mpu-066079 Mustela putorius furo 63.12 2.00e-122 433.00
IUUC-Mlu-067247 Myotis lucifugus 61.23 1.00e-142 500.00
IUUC-Nfi-068255 Neosartorya fischeri 45.40 1.00e-90 326.00
IUUC-Ncr-068909 Neurospora crassa 45.81 9.00e-103 367.00
IUUC-Nle-068994 Nomascus leucogenys 60.69 1.00e-142 500.00
IUUC-Opr-071079 Ochotona princeps 60.69 8.00e-143 501.00
IUUC-Ont-071971 Oreochromis niloticus 60.16 8.00e-141 494.00
IUUC-Oan-073135 Ornithorhynchus anatinus 60.77 6.00e-125 441.00
IUUC-Ocu-073982 Oryctolagus cuniculus 60.69 3.00e-142 499.00
IUUC-Oba-075297 Oryza barthii 69.34 8.00e-177 613.00
IUUC-Obr-076641 Oryza brachyantha 73.33 0.00e+00 654.00
IUUC-Ogl-077539 Oryza glaberrima 70.83 1.00e-133 468.00
IUUC-Ogu-078807 Oryza glumaepatula 69.34 6.00e-177 613.00
IUUC-Oin-079229 Oryza indica 73.35 0.00e+00 664.00
IUUC-Olo-080371 Oryza longistaminata 69.21 7.00e-175 606.00
IUUC-Ome-081149 Oryza meridionalis 69.10 3.00e-176 610.00
IUUC-Oni-082970 Oryza nivara 69.10 7.00e-177 613.00
IUUC-Opu-083415 Oryza punctata 68.40 7.00e-173 600.00
IUUC-Oru-085236 Oryza rufipogon 69.10 4.00e-177 614.00
IUUC-Ola-087421 Oryzias latipes 57.07 1.00e-142 498.00
IUUC-Olu-087821 Ostreococcus lucimarinus 55.49 4.00e-125 440.00
IUUC-Oga-088132 Otolemur garnettii 60.69 2.00e-142 499.00
IUUC-Oar-089513 Ovis aries 60.69 2.00e-142 499.00
IUUC-Ptr-090717 Pan troglodytes 60.69 1.00e-142 500.00
IUUC-Pan-092108 Papio anubis 60.69 1.00e-142 500.00
IUUC-Psi-093892 Pelodiscus sinensis 60.69 5.00e-142 498.00
IUUC-Pma-094561 Petromyzon marinus 60.31 2.00e-141 496.00
IUUC-Pno-094943 Phaeosphaeria nodorum 46.25 1.00e-102 366.00
IUUC-Pfo-096516 Poecilia formosa 59.74 2.00e-139 489.00
IUUC-Pab-097759 Pongo abelii 60.69 1.00e-142 500.00
IUUC-Pop-098892 Populus trichocarpa 73.58 0.00e+00 659.00
IUUC-Ppe-101957 Prunus persica 73.58 0.00e+00 664.00
IUUC-Pva-102918 Pteropus vampyrus 60.69 3.00e-142 499.00
IUUC-Pgr-103594 Puccinia graminis 52.59 2.00e-116 412.00
IUUC-Ptt-103879 Puccinia triticina 54.76 7.00e-99 353.00
IUUC-Pte-104419 Pyrenophora teres 46.19 1.00e-106 380.00
IUUC-Pyt-104718 Pyrenophora triticirepentis 48.25 1.00e-102 366.00
IUUC-Rno-105838 Rattus norvegicus 60.69 1.00e-142 500.00
IUUC-Sce-106331 Saccharomyces cerevisiae 41.46 6.00e-84 303.00
IUUC-Sha-107435 Sarcophilus harrisii 60.37 7.00e-141 494.00
IUUC-Sja-107796 Schizosaccharomyces japonicus 42.70 9.00e-106 376.00
IUUC-Spo-108163 Schizosaccharomyces pombe 45.13 2.00e-104 371.00
IUUC-Smo-109602 Selaginella moellendorffii 76.54 0.00e+00 679.00
IUUC-Sit-109729 Setaria italica 72.41 0.00e+00 655.00
IUUC-Sly-111679 Solanum lycopersicum 69.37 0.00e+00 644.00
IUUC-Sar-113157 Sorex araneus 60.69 3.00e-142 499.00
IUUC-Sbi-114853 Sorghum bicolor 69.82 0.00e+00 652.00
IUUC-Sre-115085 Sporisorium reilianum 44.81 4.00e-102 364.00
IUUC-Ssc-116286 Sus scrofa 60.53 5.00e-141 495.00
IUUC-Tgu-117219 Taeniopygia guttata 60.69 2.00e-142 499.00
IUUC-Tru-117550 Takifugu rubripes 53.66 2.00e-141 495.00
IUUC-Tsy-119294 Tarsius syrichta 60.69 6.00e-143 501.00
IUUC-Tni-120561 Tetraodon nigroviridis 60.42 2.00e-142 499.00
IUUC-Tca-121347 Theobroma cacao 73.41 0.00e+00 662.00
IUUC-Tre-122018 Trichoderma reesei 44.96 2.00e-104 372.00
IUUC-Tvi-122413 Trichoderma virens 44.96 5.00e-103 367.00
IUUC-Tae-123191 Triticum aestivum 72.95 0.00e+00 645.00
IUUC-Tme-127077 Tuber melanosporum 47.28 2.00e-111 395.00
IUUC-Tbe-127744 Tupaia belangeri 42.34 2.00e-76 280.00
IUUC-Ttr-128777 Tursiops truncatus 52.24 4.00e-112 399.00
IUUC-Uma-129568 Ustilago maydis 43.81 2.00e-96 345.00
IUUC-Vda-129834 Verticillium dahliae 41.91 3.00e-95 341.00
IUUC-Vpa-130563 Vicugna pacos 58.70 1.00e-30 127.00
IUUC-Vvi-131360 Vitis vinifera 74.59 0.00e+00 671.00
IUUC-Xtr-132630 Xenopus tropicalis 60.96 4.00e-144 505.00
IUUC-Xma-133665 Xiphophorus maculatus 60.42 2.00e-141 496.00
IUUC-Yli-134556 Yarrowia lipolytica 40.24 1.00e-84 306.00
IUUC-Zma-135787 Zea mays 72.94 0.00e+00 661.00
Created Date 25-Jun-2017

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