iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115282

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU896571

Gene Name

PREB

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000008553.2	ENSSSCT00000009358.2	ENSSSCP00000009118.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-08	32.8	161	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlrtg 33
           ++f +d tll++G+ Dg ++vW + t 
   Q: 161  VRFnHDaTLLATGGTDGYVRVWKVPTL 187
           5788889****************9775 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MGRRRAPELY RAPFPLYALQ VEPSAGLLIA AGGGGAAKTG IKNGVHFLQL ERIHGHLSAS 60
LLHSHDTETR ATMNLALAGN ILAAGQDARC QLLRFQTQQQ KGKNKAEKAA SKEQGPRQRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGACCGGGT TTGCCGGCCC GGGGCAGTGA CAGGGATCCT TGTGTGTGGT TACGGTTTCG 60
GCTTCCCGGT GGCAGGGAGA GGGGTCTGGG GTCCTCTGGC GGCCACAGGA CCGACGTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070971--C:endoplasmic reticulum exit site
GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005634--C:nucleus
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0032527--P:protein exit from endoplasmic reticulum
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	22.02	2.00e-08	53.10
IUUC-Aml-001671	Ailuropoda melanoleuca	91.85	0.00e+00	680.00
IUUC-Atr-002477	Amborella trichopoda	24.51	1.00e-10	60.50
IUUC-Ath-006922	Arabidopsis thaliana	27.43	4.00e-12	65.50
IUUC-Ame-010812	Astyanax mexicanus	50.00	6.00e-64	236.00
IUUC-Bta-012386	Bos taurus	94.46	0.00e+00	731.00
IUUC-Bdi-014110	Brachypodium distachyon	27.69	7.00e-19	87.80
IUUC-Bra-017708	Brassica rapa	28.21	1.00e-14	73.60
IUUC-Cel-018480	Caenorhabditis elegans	23.16	1.00e-21	97.40
IUUC-Cja-018998	Callithrix jacchus	91.24	0.00e+00	728.00
IUUC-Cfa-020666	Canis familiaris	92.77	0.00e+00	711.00
IUUC-Cpo-022030	Cavia porcellus	80.62	1.00e-178	618.00
IUUC-Csa-023521	Chlorocebus sabaeus	92.55	0.00e+00	694.00
IUUC-Cin-025431	Ciona intestinalis	32.34	2.00e-46	179.00
IUUC-Dre-027832	Danio rerio	56.16	9.00e-132	462.00
IUUC-Dno-028989	Dasypus novemcinctus	88.43	0.00e+00	721.00
IUUC-Dme-031901	Drosophila melanogaster	32.29	3.00e-52	199.00
IUUC-Ete-032290	Echinops telfairi	88.43	0.00e+00	672.00
IUUC-Eca-033917	Equus caballus	95.42	0.00e+00	740.00
IUUC-Fca-036323	Felis catus	94.22	0.00e+00	735.00
IUUC-Gmo-038693	Gadus morhua	56.45	4.00e-131	461.00
IUUC-Gga-040702	Gallus gallus	67.15	3.00e-144	504.00
IUUC-Gac-042635	Gasterosteus aculeatus	55.94	8.00e-120	423.00
IUUC-Gma-043946	Glycine max	27.78	5.00e-18	85.10
IUUC-Ggo-044648	Gorilla gorilla	91.55	0.00e+00	664.00
IUUC-Hsa-046003	Homo sapiens	92.05	0.00e+00	697.00
IUUC-Itr-048613	Ictidomys tridecemlineatus	89.88	0.00e+00	685.00
IUUC-Lch-049473	Latimeria chalumnae	61.52	1.00e-144	505.00
IUUC-Lpe-051586	Leersia perrieri	26.37	3.00e-18	85.90
IUUC-Loc-052177	Lepisosteus oculatus	60.72	2.00e-140	492.00
IUUC-Laf-054366	Loxodonta africana	91.81	0.00e+00	712.00
IUUC-Mcc-055775	Macaca mulatta	92.33	0.00e+00	692.00
IUUC-Meu-056562	Macropus eugenii	77.59	5.00e-160	556.00
IUUC-Mtr-058661	Medicago truncatula	27.44	2.00e-18	87.00
IUUC-Mvi-060443	Microbotryum violaceum	22.39	2.00e-10	60.50
IUUC-Mmr-061126	Microcebus murinus	92.05	0.00e+00	679.00
IUUC-Mdo-062928	Monodelphis domestica	78.42	2.00e-162	565.00
IUUC-Mmu-064083	Mus musculus	84.82	3.00e-180	624.00
IUUC-Mac-064955	Musa acuminata	27.85	1.00e-15	77.00
IUUC-Mpu-066857	Mustela putorius furo	91.81	0.00e+00	748.00
IUUC-Mlu-067891	Myotis lucifugus	92.29	0.00e+00	705.00
IUUC-Nle-070030	Nomascus leucogenys	90.36	0.00e+00	671.00
IUUC-Opr-070864	Ochotona princeps	90.94	2.00e-131	461.00
IUUC-Ont-072204	Oreochromis niloticus	58.31	7.00e-128	449.00
IUUC-Oan-073643	Ornithorhynchus anatinus	71.14	5.00e-121	426.00
IUUC-Ocu-074217	Oryctolagus cuniculus	89.16	0.00e+00	651.00
IUUC-Oba-075587	Oryza barthii	27.62	2.00e-17	82.80
IUUC-Obr-076826	Oryza brachyantha	26.37	2.00e-18	86.70
IUUC-Ogl-077927	Oryza glaberrima	25.69	6.00e-18	84.70
IUUC-Ogu-078241	Oryza glumaepatula	25.69	8.00e-18	84.30
IUUC-Oin-080217	Oryza indica	25.69	9.00e-18	84.30
IUUC-Olo-081060	Oryza longistaminata	25.58	5.00e-18	85.10
IUUC-Ome-082007	Oryza meridionalis	25.69	4.00e-18	85.10
IUUC-Oni-082827	Oryza nivara	25.69	9.00e-18	84.30
IUUC-Opu-083159	Oryza punctata	25.70	4.00e-17	82.40
IUUC-Oru-085039	Oryza rufipogon	25.69	9.00e-18	84.30
IUUC-Osa-086258	Oryza sativa	25.69	9.00e-18	84.30
IUUC-Ola-087223	Oryzias latipes	57.21	3.00e-121	427.00
IUUC-Oga-088417	Otolemur garnettii	89.16	0.00e+00	656.00
IUUC-Oar-090435	Ovis aries	94.22	0.00e+00	729.00
IUUC-Ptr-090869	Pan troglodytes	92.29	0.00e+00	675.00
IUUC-Pan-092527	Papio anubis	92.55	0.00e+00	694.00
IUUC-Pma-094156	Petromyzon marinus	54.85	9.00e-115	406.00
IUUC-Ppa-095590	Physcomitrella patens	29.22	7.00e-15	74.70
IUUC-Pfo-097488	Poecilia formosa	52.69	5.00e-122	430.00
IUUC-Pab-097720	Pongo abelii	92.29	0.00e+00	694.00
IUUC-Pop-099618	Populus trichocarpa	27.20	3.00e-18	85.90
IUUC-Pca-100288	Procavia capensis	89.12	2.00e-170	591.00
IUUC-Ppe-101864	Prunus persica	27.08	3.00e-12	65.90
IUUC-Pva-103192	Pteropus vampyrus	93.25	0.00e+00	719.00
IUUC-Rno-106123	Rattus norvegicus	86.02	0.00e+00	634.00
IUUC-Sha-107169	Sarcophilus harrisii	79.86	7.00e-166	576.00
IUUC-Smo-109265	Selaginella moellendorffii	27.56	5.00e-14	72.00
IUUC-Sly-111551	Solanum lycopersicum	27.92	2.00e-15	76.30
IUUC-Stu-112264	Solanum tuberosum	27.41	5.00e-14	71.60
IUUC-Sar-113218	Sorex araneus	85.52	1.00e-112	398.00
IUUC-Tru-117866	Takifugu rubripes	55.83	1.00e-120	426.00
IUUC-Tca-121083	Theobroma cacao	29.79	5.00e-18	85.10
IUUC-Tae-124218	Triticum aestivum	29.65	9.00e-18	84.00
IUUC-Ttr-128585	Tursiops truncatus	93.98	0.00e+00	669.00
IUUC-Vvi-131024	Vitis vinifera	28.12	1.00e-18	86.70
IUUC-Xma-134081	Xiphophorus maculatus	52.84	3.00e-120	424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence