iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015894

Ensembl Protein ID

Bo4g120240.1

UniProt Accession

A0A0D3BY64; A0A0D3BY64_BRAOL

Protein Name

Reticulon-like protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g120240	Bo4g120240.1	Bo4g120240.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Josephin	44.05	3.00e-39	160.00	IUUC-Mmu-063600
UBD/Alpha-Helix/UIM	44.05	3.00e-39	160.00	IUUC-Mmu-063600

Active Site

Position(s)	Description	Evidence
61	N/A	{ECO:0000256\|PROSITE-ProRule:PRU00331}
167		{ECO:0000256\|PROSITE-ProRule:PRU00331}
182		{ECO:0000256\|PROSITE-ProRule:PRU00331}

Organism

Brassica oleracea

Protein Sequence
(Fasta)

GVIFCLLTSD LPLLLHLSLP NCFKAKTFAS LHDIKQRNLG FMERTSNGGM LYHEVQEANL 60
CAVHCVNTVL QGPFFSEFDL AAVAADLDGK ERQVMLEGAA TGNFAAGDFF SEESHNVSLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGTAATAT TCTGTTTATT AACCTCCGAT CTCCCGTTGC TTCTTCATCT CTCGCTTCCT 60
AATTGCTTCA AGGCAAAGAC TTTCGCATCG CTTCATGATA TAAAGCAGAG GAATCTAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR033865--Ataxin-3
IPR006155--Josephin
IPR003388--Reticulon
IPR009068--S15_NS1_RNA-bd

PROSITE

PS50957--JOSEPHIN
PS50845--RETICULON

Pfam

PF02099--Josephin
PF02453--Reticulon

SMART

SM01246--Josephin

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002015	Ailuropoda melanoleuca	44.17	3.00e-39	155.00
IUUC-Atr-002735	Amborella trichopoda	82.46	1.00e-18	84.00
IUUC-Apl-003210	Anas platyrhynchos	43.56	2.00e-38	152.00
IUUC-Aca-005171	Anolis carolinensis	41.67	2.00e-27	115.00
IUUC-Aly-005625	Arabidopsis lyrata	89.88	1.00e-127	448.00
IUUC-Ath-007088	Arabidopsis thaliana	86.93	2.00e-128	451.00
IUUC-Ame-010715	Astyanax mexicanus	42.61	1.00e-39	156.00
IUUC-Bta-013538	Bos taurus	43.79	9.00e-40	157.00
IUUC-Bdi-015000	Brachypodium distachyon	72.33	4.00e-82	297.00
IUUC-Bra-018020	Brassica rapa	90.34	2.00e-127	449.00
IUUC-Cel-018121	Caenorhabditis elegans	35.50	3.00e-27	115.00
IUUC-Cja-018840	Callithrix jacchus	36.74	3.00e-41	162.00
IUUC-Cfa-021035	Canis familiaris	44.05	3.00e-41	162.00
IUUC-Cpo-021776	Cavia porcellus	43.90	4.00e-38	151.00
IUUC-Csa-023257	Chlorocebus sabaeus	44.38	3.00e-38	152.00
IUUC-Cho-024878	Choloepus hoffmanni	44.17	8.00e-38	150.00
IUUC-Cme-027158	Cyanidioschyzon merolae	32.88	3.00e-11	61.60
IUUC-Dre-027506	Danio rerio	43.36	8.00e-27	113.00
IUUC-Dno-029172	Dasypus novemcinctus	43.79	2.00e-39	155.00
IUUC-Dor-030900	Dipodomys ordii	44.05	1.00e-40	159.00
IUUC-Ete-033000	Echinops telfairi	31.62	6.00e-11	61.20
IUUC-Eca-034338	Equus caballus	44.17	3.00e-39	155.00
IUUC-Eeu-034585	Erinaceus europaeus	44.32	3.00e-21	95.10
IUUC-Fal-037525	Ficedula albicollis	42.86	6.00e-39	154.00
IUUC-Gmo-039718	Gadus morhua	43.27	2.00e-39	155.00
IUUC-Gga-040774	Gallus gallus	43.45	3.00e-40	158.00
IUUC-Gac-041671	Gasterosteus aculeatus	43.86	2.00e-36	145.00
IUUC-Gma-042801	Glycine max	67.36	3.00e-96	344.00
IUUC-Ggo-044759	Gorilla gorilla	45.71	3.00e-26	111.00
IUUC-Hsa-046591	Homo sapiens	36.74	5.00e-41	161.00
IUUC-Hvu-047492	Hordeum vulgare	76.24	3.00e-84	304.00
IUUC-Itr-048851	Ictidomys tridecemlineatus	31.29	2.00e-17	82.40
IUUC-Lch-049519	Latimeria chalumnae	33.00	3.00e-25	108.00
IUUC-Lpe-050819	Leersia perrieri	64.53	5.00e-85	307.00
IUUC-Loc-051816	Lepisosteus oculatus	45.03	2.00e-41	162.00
IUUC-Laf-053784	Loxodonta africana	44.05	8.00e-41	160.00
IUUC-Mcc-055283	Macaca mulatta	44.05	4.00e-41	161.00
IUUC-Meu-056589	Macropus eugenii	39.88	2.00e-34	139.00
IUUC-Mtr-058233	Medicago truncatula	66.55	8.00e-100	356.00
IUUC-Mla-059013	Melampsora laricipopulina	31.36	2.00e-15	76.60
IUUC-Mga-059301	Meleagris gallopavo	43.45	2.00e-40	159.00
IUUC-Mmr-061038	Microcebus murinus	44.05	3.00e-41	162.00
IUUC-Mdo-062927	Monodelphis domestica	44.05	2.00e-40	159.00
IUUC-Mmu-063600	Mus musculus	44.05	9.00e-41	160.00
IUUC-Mpu-065897	Mustela putorius furo	36.54	4.00e-38	151.00
IUUC-Mlu-067543	Myotis lucifugus	44.17	2.00e-39	156.00
IUUC-Nle-069430	Nomascus leucogenys	42.86	1.00e-37	150.00
IUUC-Opr-070550	Ochotona princeps	36.20	2.00e-27	116.00
IUUC-Ont-071723	Oreochromis niloticus	43.27	7.00e-36	144.00
IUUC-Oan-073569	Ornithorhynchus anatinus	43.45	4.00e-40	158.00
IUUC-Ocu-074632	Oryctolagus cuniculus	43.90	8.00e-38	150.00
IUUC-Oba-075288	Oryza barthii	64.02	6.00e-87	313.00
IUUC-Obr-076050	Oryza brachyantha	74.88	5.00e-80	291.00
IUUC-Ogl-077174	Oryza glaberrima	64.02	6.00e-87	313.00
IUUC-Ogu-078006	Oryza glumaepatula	64.02	5.00e-87	314.00
IUUC-Oin-079278	Oryza indica	61.68	1.00e-84	306.00
IUUC-Olo-080941	Oryza longistaminata	63.77	5.00e-87	314.00
IUUC-Ome-081172	Oryza meridionalis	74.51	9.00e-87	313.00
IUUC-Oni-082239	Oryza nivara	63.64	2.00e-86	312.00
IUUC-Opu-083939	Oryza punctata	63.77	2.00e-86	311.00
IUUC-Oru-084393	Oryza rufipogon	64.02	6.00e-87	313.00
IUUC-Osa-086080	Oryza sativa	63.64	1.00e-86	312.00
IUUC-Ola-087566	Oryzias latipes	42.46	3.00e-36	145.00
IUUC-Oga-088617	Otolemur garnettii	31.55	4.00e-19	88.20
IUUC-Oar-090052	Ovis aries	43.45	9.00e-39	154.00
IUUC-Ptr-091435	Pan troglodytes	44.05	4.00e-41	161.00
IUUC-Pan-092742	Papio anubis	44.38	1.00e-38	153.00
IUUC-Psi-093313	Pelodiscus sinensis	43.45	3.00e-40	158.00
IUUC-Pma-094374	Petromyzon marinus	43.37	9.00e-37	147.00
IUUC-Ppa-095601	Physcomitrella patens	54.77	6.00e-63	234.00
IUUC-Pfo-097327	Poecilia formosa	43.02	3.00e-37	148.00
IUUC-Pab-098435	Pongo abelii	43.45	4.00e-38	151.00
IUUC-Pca-101022	Procavia capensis	43.36	5.00e-22	98.20
IUUC-Ppe-101545	Prunus persica	83.01	6.00e-100	357.00
IUUC-Pva-102844	Pteropus vampyrus	44.05	9.00e-41	160.00
IUUC-Rno-104896	Rattus norvegicus	44.05	6.00e-41	160.00
IUUC-Sha-107106	Sarcophilus harrisii	44.05	1.00e-40	160.00
IUUC-Sja-107947	Schizosaccharomyces japonicus	24.75	1.70e-02	34.30
IUUC-Sit-110477	Setaria italica	74.40	1.00e-85	309.00
IUUC-Sly-111416	Solanum lycopersicum	62.28	6.00e-54	203.00
IUUC-Stu-112227	Solanum tuberosum	64.71	9.00e-59	219.00
IUUC-Sar-113534	Sorex araneus	44.17	5.00e-39	154.00
IUUC-Sbi-114751	Sorghum bicolor	74.16	2.00e-84	305.00
IUUC-Ssc-115274	Sus scrofa	44.05	3.00e-41	162.00
IUUC-Tgu-117426	Taeniopygia guttata	43.56	3.00e-38	152.00
IUUC-Tru-118059	Takifugu rubripes	43.27	4.00e-36	144.00
IUUC-Tsy-119448	Tarsius syrichta	35.71	8.00e-28	117.00
IUUC-Tni-120681	Tetraodon nigroviridis	42.52	1.00e-23	101.00
IUUC-Tca-121442	Theobroma cacao	71.58	6.00e-109	386.00
IUUC-Tae-123969	Triticum aestivum	72.36	4.00e-75	274.00
IUUC-Tme-127036	Tuber melanosporum	31.82	3.10e-01	31.20
IUUC-Tbe-127638	Tupaia belangeri	39.26	5.00e-29	121.00
IUUC-Ttr-129288	Tursiops truncatus	36.90	7.00e-30	124.00
IUUC-Uma-129359	Ustilago maydis	35.00	3.00e-24	106.00
IUUC-Vpa-130788	Vicugna pacos	36.68	2.00e-39	156.00
IUUC-Vvi-131227	Vitis vinifera	76.21	6.00e-89	320.00
IUUC-Xtr-132147	Xenopus tropicalis	44.19	1.00e-40	159.00
IUUC-Xma-133144	Xiphophorus maculatus	43.02	2.00e-37	149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence