iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135827

Ensembl Protein ID

Zm00001d043157_T002

UniProt Accession

B4F7X8; B4F7X8_MAIZE

Genbank Protein ID

ACF78221.1; ACG31674.1; ONM37139.1

Protein Name

Rhomboid-like protein 20; UBA/TS-N domain

Genbank Nucleotide ID

BT033216; EU959556; CM007649

Gene Name

ZEAMMB73_Zm00001d043157

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d043157	Zm00001d043157_T001	Zm00001d043157_T001
Zm00001d043157	Zm00001d043157_T002	Zm00001d043157_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	7.70e-09	37.4	249	285

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLld 40
           e+ ++ lv MGFdr++a+qaL+ +n++++ A++ Ll+
   Q: 249  ESSIAALVTMGFDRSAAIQALALTNYDVNLASNILLE 285
           899********************************96 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MNGGLPGFHN APASKAVVVA AGLFSVAFGF RGHSLNLGLA YQSVYEKLSV WRLITSLFAF 60
SSTPELIFGA ALLYYFRVFE RQIGSNKYAV FIIFSTMVSV LLQILSLGYM KDPSLNPLTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGATCTCT CGAGCGCTTC GAGAAAGTTT CAGGCCCTCC GCCCCTGCAA GCGTCCACTG 60
ACCAGACCTG GCCAGCCCAG GCGTGGAGGT GCTCGTCTCC TCCGCCGCGC CGGGACCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF01694--Rhomboid
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity

KEGG

zma:100191187

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002272	Ailuropoda melanoleuca	28.00	9.00e-21	93.60
IUUC-Apl-004075	Anas platyrhynchos	27.94	1.00e-25	110.00
IUUC-Aca-004595	Anolis carolinensis	27.90	9.00e-23	100.00
IUUC-Acl-008340	Aspergillus clavatus	33.00	3.00e-05	42.00
IUUC-Afu-009037	Aspergillus fumigatus	30.20	6.00e-07	47.80
IUUC-Ang-009777	Aspergillus niger	30.05	4.00e-07	47.80
IUUC-Ame-011242	Astyanax mexicanus	40.86	6.00e-10	57.40
IUUC-Bta-013487	Bos taurus	26.69	5.00e-20	91.30
IUUC-Bdi-014757	Brachypodium distachyon	77.78	3.00e-120	424.00
IUUC-Cja-018818	Callithrix jacchus	27.33	5.00e-21	94.40
IUUC-Cfa-021174	Canis familiaris	28.76	3.00e-24	105.00
IUUC-Cpo-021964	Cavia porcellus	28.00	2.00e-21	96.30
IUUC-Csa-024015	Chlorocebus sabaeus	27.33	8.00e-21	94.00
IUUC-Cho-024706	Choloepus hoffmanni	27.85	4.00e-18	84.70
IUUC-Cgl-026433	Colletotrichum gloeosporioides	26.59	3.00e-16	78.20
IUUC-Cne-026916	Cryptococcus neoformans	30.62	4.00e-15	75.10
IUUC-Cme-027354	Cyanidioschyzon merolae	35.51	5.00e-10	57.80
IUUC-Dre-027633	Danio rerio	30.73	1.00e-16	80.10
IUUC-Dno-029418	Dasypus novemcinctus	27.33	7.00e-21	94.00
IUUC-Dor-030432	Dipodomys ordii	27.73	5.00e-21	94.70
IUUC-Eca-034280	Equus caballus	28.33	4.00e-22	98.20
IUUC-Eeu-034998	Erinaceus europaeus	29.04	5.00e-21	94.70
IUUC-Fca-036332	Felis catus	28.15	2.00e-22	99.00
IUUC-Fal-036680	Ficedula albicollis	28.61	4.00e-25	108.00
IUUC-Gmo-039606	Gadus morhua	30.23	4.00e-12	65.10
IUUC-Gga-041116	Gallus gallus	26.82	1.00e-22	99.80
IUUC-Ggo-045366	Gorilla gorilla	27.67	7.00e-21	94.00
IUUC-Hsa-045893	Homo sapiens	27.76	3.00e-20	92.00
IUUC-Lpe-051354	Leersia perrieri	70.04	2.00e-91	329.00
IUUC-Loc-052511	Lepisosteus oculatus	28.91	7.00e-23	100.00
IUUC-Laf-053414	Loxodonta africana	26.67	3.00e-21	95.10
IUUC-Mcc-055111	Macaca mulatta	27.33	9.00e-21	93.60
IUUC-Meu-056905	Macropus eugenii	33.33	4.00e-16	78.20
IUUC-Mga-059639	Meleagris gallopavo	40.32	2.00e-06	44.70
IUUC-Mvi-060380	Microbotryum violaceum	31.29	5.00e-10	58.50
IUUC-Mmr-061267	Microcebus murinus	30.81	1.00e-11	63.50
IUUC-Mdo-062640	Monodelphis domestica	27.91	3.00e-22	98.60
IUUC-Mmu-063305	Mus musculus	28.38	2.00e-19	89.00
IUUC-Mpu-066519	Mustela putorius furo	28.43	9.00e-22	97.10
IUUC-Nfi-068304	Neosartorya fischeri	28.57	7.00e-08	50.80
IUUC-Nle-070130	Nomascus leucogenys	32.79	1.00e-16	79.70
IUUC-Opr-070252	Ochotona princeps	27.00	2.00e-21	95.90
IUUC-Ont-072624	Oreochromis niloticus	32.31	4.00e-14	72.00
IUUC-Oan-072843	Ornithorhynchus anatinus	33.33	1.00e-13	68.90
IUUC-Ocu-073940	Oryctolagus cuniculus	28.00	7.00e-21	94.00
IUUC-Oba-075875	Oryza barthii	65.81	2.00e-98	351.00
IUUC-Obr-076147	Oryza brachyantha	80.28	9.00e-121	425.00
IUUC-Ogl-077322	Oryza glaberrima	78.55	2.00e-123	434.00
IUUC-Ogu-078996	Oryza glumaepatula	76.56	6.00e-111	392.00
IUUC-Oin-079646	Oryza indica	65.23	5.00e-93	333.00
IUUC-Olo-081041	Oryza longistaminata	65.05	7.00e-103	367.00
IUUC-Ome-081238	Oryza meridionalis	76.36	5.00e-111	392.00
IUUC-Oni-082310	Oryza nivara	72.79	2.00e-115	407.00
IUUC-Opu-083821	Oryza punctata	70.16	5.00e-92	329.00
IUUC-Oru-084586	Oryza rufipogon	72.38	4.00e-118	417.00
IUUC-Osa-085823	Oryza sativa	80.20	6.00e-90	323.00
IUUC-Ola-086714	Oryzias latipes	48.65	2.00e-05	43.10
IUUC-Oga-088600	Otolemur garnettii	28.24	3.00e-21	95.10
IUUC-Oar-090421	Ovis aries	26.58	7.00e-19	87.40
IUUC-Ptr-091509	Pan troglodytes	27.76	3.00e-20	92.00
IUUC-Pan-092468	Papio anubis	27.33	9.00e-21	93.60
IUUC-Psi-093075	Pelodiscus sinensis	28.09	1.00e-20	93.60
IUUC-Pno-095028	Phaeosphaeria nodorum	28.77	1.00e-07	50.10
IUUC-Pab-097915	Pongo abelii	27.67	8.00e-21	94.00
IUUC-Pca-100602	Procavia capensis	21.74	5.00e-10	57.80
IUUC-Pva-102466	Pteropus vampyrus	28.57	1.00e-20	93.20
IUUC-Rno-105226	Rattus norvegicus	28.00	3.00e-19	88.60
IUUC-Sha-106739	Sarcophilus harrisii	28.67	2.00e-20	92.80
IUUC-Sit-110720	Setaria italica	80.13	2.00e-126	444.00
IUUC-Sar-113380	Sorex araneus	31.69	3.00e-11	61.60
IUUC-Sbi-113779	Sorghum bicolor	91.38	1.00e-144	504.00
IUUC-Ssc-115286	Sus scrofa	32.19	4.00e-13	67.80
IUUC-Tgu-117075	Taeniopygia guttata	28.61	3.00e-24	105.00
IUUC-Tsy-118933	Tarsius syrichta	32.79	3.00e-16	78.60
IUUC-Tae-125696	Triticum aestivum	77.78	4.00e-119	420.00
IUUC-Tur-126868	Triticum urartu	67.74	5.00e-90	323.00
IUUC-Ttr-128543	Tursiops truncatus	26.39	2.00e-20	92.40
IUUC-Vpa-130623	Vicugna pacos	22.67	2.00e-10	59.30
IUUC-Yli-134415	Yarrowia lipolytica	25.96	5.00e-12	64.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence