iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mdo-061882

UUCD1 version

UUC-MoD-00362

Ensembl Protein ID

ENSMODP00000033082.1

UniProt Accession

F6WKK5; F6WKK5_MONDO

Protein Name

Uncharacterized protein

Gene Name

TRIM13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000024106.1	ENSMODT00000034660.1	ENSMODP00000033082.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-08	35.4	13	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C+iC++ f+d p+vlpC H f+++Cl+ +    +  +   +  f+CP+Cr
   Q: 13   CPICCSLFDD-PRVLPCSHNFCKKCLEGIlegnVRNMLWRQSPFKCPTCR 61
           ********99.**************977777777888889*********8 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

QSIMELLEED LTCPICCSLF DDPRVLPCSH NFCKKCLEGI LEGNVRNMLW RQSPFKCPTC 60
RKETAAAGVN SLQVNYSLKG IVEKYNKIKV SPKMPVCKGH VGQPLNIFCL TDMQLICGIC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAGTATAA TGGAGCTACT TGAAGAAGAC CTCACATGCC CTATTTGTTG CAGCTTGTTT 60
GATGATCCCC GAGTTCTGCC TTGTTCTCAC AATTTCTGCA AAAAATGCCT GGAAGGTATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0097038--C:perinuclear endoplasmic reticulum
GO:0004871--F:signal transducer activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045087--P:innate immune response
GO:1902187--P:negative regulation of viral release from host cell
GO:0032897--P:negative regulation of viral transcription
GO:0010942--P:positive regulation of cell death
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0016239--P:positive regulation of macroautophagy
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0051865--P:protein autoubiquitination
GO:0010332--P:response to gamma radiation
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002269	Ailuropoda melanoleuca	84.60	0.00e+00	686.00
IUUC-Apl-004168	Anas platyrhynchos	76.23	0.00e+00	635.00
IUUC-Aca-004395	Anolis carolinensis	71.08	3.00e-171	594.00
IUUC-Ame-011325	Astyanax mexicanus	48.09	4.00e-68	251.00
IUUC-Bta-012613	Bos taurus	83.09	0.00e+00	666.00
IUUC-Cja-018856	Callithrix jacchus	82.89	0.00e+00	702.00
IUUC-Cfa-021019	Canis familiaris	83.94	0.00e+00	680.00
IUUC-Cpo-021845	Cavia porcellus	81.37	0.00e+00	661.00
IUUC-Csa-023380	Chlorocebus sabaeus	83.82	0.00e+00	676.00
IUUC-Cho-024733	Choloepus hoffmanni	71.04	2.00e-77	282.00
IUUC-Dre-028675	Danio rerio	60.87	5.00e-110	390.00
IUUC-Dno-030018	Dasypus novemcinctus	81.62	0.00e+00	672.00
IUUC-Dor-030599	Dipodomys ordii	77.24	2.00e-110	391.00
IUUC-Ete-033134	Echinops telfairi	82.64	0.00e+00	683.00
IUUC-Eca-033931	Equus caballus	84.11	0.00e+00	673.00
IUUC-Eeu-034903	Erinaceus europaeus	81.91	0.00e+00	662.00
IUUC-Fca-035642	Felis catus	83.82	0.00e+00	666.00
IUUC-Fal-037108	Ficedula albicollis	76.96	0.00e+00	644.00
IUUC-Gga-040903	Gallus gallus	76.00	0.00e+00	626.00
IUUC-Ggo-044635	Gorilla gorilla	82.89	0.00e+00	673.00
IUUC-Hsa-046345	Homo sapiens	82.89	0.00e+00	675.00
IUUC-Itr-048220	Ictidomys tridecemlineatus	81.51	0.00e+00	646.00
IUUC-Lch-050599	Latimeria chalumnae	61.23	5.00e-142	497.00
IUUC-Loc-052378	Lepisosteus oculatus	64.47	2.00e-118	418.00
IUUC-Laf-053332	Loxodonta africana	85.29	0.00e+00	689.00
IUUC-Mcc-054705	Macaca mulatta	83.86	0.00e+00	674.00
IUUC-Meu-056825	Macropus eugenii	93.15	0.00e+00	762.00
IUUC-Mga-059528	Meleagris gallopavo	75.25	0.00e+00	636.00
IUUC-Mmr-060688	Microcebus murinus	83.13	0.00e+00	671.00
IUUC-Mmu-064352	Mus musculus	80.15	0.00e+00	673.00
IUUC-Mpu-066712	Mustela putorius furo	85.00	0.00e+00	635.00
IUUC-Mlu-068093	Myotis lucifugus	83.58	0.00e+00	667.00
IUUC-Nle-069310	Nomascus leucogenys	82.84	0.00e+00	669.00
IUUC-Ont-071759	Oreochromis niloticus	60.59	3.00e-111	395.00
IUUC-Oan-073673	Ornithorhynchus anatinus	81.02	0.00e+00	694.00
IUUC-Ocu-074192	Oryctolagus cuniculus	84.11	0.00e+00	684.00
IUUC-Ola-087424	Oryzias latipes	59.35	2.00e-110	392.00
IUUC-Oga-088808	Otolemur garnettii	84.07	0.00e+00	673.00
IUUC-Oar-089553	Ovis aries	82.40	0.00e+00	666.00
IUUC-Ptr-090518	Pan troglodytes	82.64	0.00e+00	669.00
IUUC-Pan-092781	Papio anubis	83.62	0.00e+00	673.00
IUUC-Psi-093914	Pelodiscus sinensis	74.82	0.00e+00	628.00
IUUC-Pfo-096346	Poecilia formosa	57.28	5.00e-108	384.00
IUUC-Pca-100914	Procavia capensis	82.40	0.00e+00	691.00
IUUC-Pva-102728	Pteropus vampyrus	84.11	0.00e+00	675.00
IUUC-Rno-105922	Rattus norvegicus	79.17	4.00e-180	624.00
IUUC-Sha-107124	Sarcophilus harrisii	94.38	0.00e+00	786.00
IUUC-Sja-107830	Schizosaccharomyces japonicus	36.05	7.00e-08	52.00
IUUC-Sar-113607	Sorex araneus	81.66	0.00e+00	644.00
IUUC-Ssc-116355	Sus scrofa	84.07	0.00e+00	675.00
IUUC-Tgu-116476	Taeniopygia guttata	75.98	0.00e+00	636.00
IUUC-Tru-118737	Takifugu rubripes	59.93	2.00e-110	392.00
IUUC-Tsy-118908	Tarsius syrichta	82.89	0.00e+00	678.00
IUUC-Tbe-127258	Tupaia belangeri	84.84	0.00e+00	684.00
IUUC-Vpa-130138	Vicugna pacos	83.13	0.00e+00	672.00
IUUC-Xtr-132100	Xenopus tropicalis	59.07	3.00e-135	474.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence