iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mcc-055883

Ensembl Protein ID

ENSMMUP00000009940.3

UniProt Accession

F6SSW0; F6SSW0_MACMU

Genbank Protein ID

ENSMMUP00000009940

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

JSUE03025496

Gene Name

SLX4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMMUG00000007574.3	ENSMMUT00000010596.3	ENSMMUP00000009940.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	2.20e-09	38.4	278	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 2    lvCPvCqkm...vdqtdfeeHlDeCl 24
           ++C++Cqk    +++t++e+H+++Cl
   Q: 278  FFCQICQKNlsaMNVTRREQHVNRCL 303
           89***********************8 PP

Organism

Macaca mulatta

Protein Sequence
(Fasta)

AQLGFYLGSL SHLSACPGID PRSSEDQPES LKTDFKELCA SFFQRVKKHG IKEVSGERKT 60
QNASSNGTQV RRKLKRTKQT ATKTKTLQGP AEKKPPSGSQ APRTKKQGVT KWQASEPALS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCAGCTAG GCTTCTACTT GGGTTCACTT TCTCATCTGT CTGCATGTCC CGGGATTGAC 60
CCTCGCTCCT CTGAAGACCA GCCTGAAAGC CTTAAAACTG GTCAGTGATG GATGAGTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR018574--Structure-sp_endonuc_su_Slx4

PROSITE

PS50097--BTB

Pfam

PF00651--BTB
PF09494--Slx4

SMART

SM00225--BTB

Gene Ontology

GO:0030054--C:cell junction
GO:0005829--C:cytosol
GO:0070522--C:ERCC4-ERCC1 complex
GO:0048476--C:Holliday junction resolvase complex
GO:0000790--C:nuclear chromatin
GO:0000784--C:nuclear chromosome, telomeric region
GO:0005654--C:nucleoplasm
GO:0033557--C:Slx1-Slx4 complex
GO:0048257--F:3'-flap endonuclease activity
GO:0017108--F:5'-flap endonuclease activity
GO:0008821--F:crossover junction endodeoxyribonuclease activity
GO:0008047--F:enzyme activator activity
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0006260--P:DNA replication
GO:0000724--P:double-strand break repair via homologous recombination
GO:0036297--P:interstrand cross-link repair
GO:0000706--P:meiotic DNA double-strand break processing
GO:1904357--P:negative regulation of telomere maintenance via telomere lengthening
GO:0006289--P:nucleotide-excision repair
GO:1904431--P:positive regulation of t-circle formation
GO:0000712--P:resolution of meiotic recombination intermediates
GO:0072429--P:response to intra-S DNA damage checkpoint signaling
GO:0090656--P:t-circle formation
GO:0061820--P:telomeric D-loop disassembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001225	Ailuropoda melanoleuca	62.84	0.00e+00	1424.00
IUUC-Apl-003261	Anas platyrhynchos	41.70	1.00e-149	524.00
IUUC-Aca-004455	Anolis carolinensis	59.65	3.00e-15	72.80
IUUC-Acl-008026	Aspergillus clavatus	24.49	7.80e-02	33.10
IUUC-Ame-010993	Astyanax mexicanus	38.53	1.00e-10	60.10
IUUC-Bta-013472	Bos taurus	60.18	0.00e+00	1449.00
IUUC-Cel-018663	Caenorhabditis elegans	38.64	4.00e-03	36.60
IUUC-Cja-019406	Callithrix jacchus	82.82	0.00e+00	2412.00
IUUC-Cfa-020129	Canis familiaris	60.11	0.00e+00	1457.00
IUUC-Cpo-021944	Cavia porcellus	56.93	0.00e+00	1363.00
IUUC-Csa-023941	Chlorocebus sabaeus	95.38	0.00e+00	1453.00
IUUC-Cho-024847	Choloepus hoffmanni	67.65	2.00e-158	553.00
IUUC-Cin-025405	Ciona intestinalis	42.31	1.00e-06	47.40
IUUC-Csv-025916	Ciona savignyi	38.98	4.00e-08	51.60
IUUC-Dre-027764	Danio rerio	34.28	5.00e-79	290.00
IUUC-Dno-030083	Dasypus novemcinctus	58.62	0.00e+00	1376.00
IUUC-Dor-031129	Dipodomys ordii	53.22	0.00e+00	1053.00
IUUC-Dse-031510	Dothistroma septosporum	38.89	8.40e-02	33.10
IUUC-Ete-032536	Echinops telfairi	45.28	1.00e-122	435.00
IUUC-Eca-033407	Equus caballus	65.14	0.00e+00	1424.00
IUUC-Eeu-034473	Erinaceus europaeus	51.05	8.00e-55	209.00
IUUC-Fca-035730	Felis catus	61.82	0.00e+00	1489.00
IUUC-Fal-036850	Ficedula albicollis	44.55	2.00e-137	484.00
IUUC-Gmo-038677	Gadus morhua	44.21	6.00e-41	162.00
IUUC-Gga-041088	Gallus gallus	43.54	8.00e-129	456.00
IUUC-Gac-041824	Gasterosteus aculeatus	78.95	4.00e-13	67.80
IUUC-Ggo-045642	Gorilla gorilla	89.81	0.00e+00	2326.00
IUUC-Hsa-047035	Homo sapiens	89.98	0.00e+00	2743.00
IUUC-Hvu-047552	Hordeum vulgare	34.23	1.00e-05	43.50
IUUC-Itr-049010	Ictidomys tridecemlineatus	65.65	0.00e+00	1751.00
IUUC-Kpa-049328	Komagataella pastoris	29.41	3.00e-04	40.40
IUUC-Lch-050364	Latimeria chalumnae	42.66	3.00e-82	300.00
IUUC-Loc-052423	Lepisosteus oculatus	43.71	1.00e-46	182.00
IUUC-Lma-053057	Leptosphaeria maculans	29.27	6.20e-01	29.60
IUUC-Laf-053910	Loxodonta africana	58.41	0.00e+00	1392.00
IUUC-Meu-056224	Macropus eugenii	51.68	2.00e-91	331.00
IUUC-Mga-059880	Meleagris gallopavo	39.50	2.00e-136	481.00
IUUC-Mvi-060510	Microbotryum violaceum	32.73	2.00e-03	38.50
IUUC-Mmr-061715	Microcebus murinus	70.13	0.00e+00	1993.00
IUUC-Mdo-062426	Monodelphis domestica	43.86	0.00e+00	1023.00
IUUC-Mmu-063947	Mus musculus	56.22	0.00e+00	1401.00
IUUC-Mpu-066184	Mustela putorius furo	64.34	0.00e+00	968.00
IUUC-Mlu-067533	Myotis lucifugus	64.07	0.00e+00	1548.00
IUUC-Nle-069204	Nomascus leucogenys	89.70	0.00e+00	2750.00
IUUC-Opr-070377	Ochotona princeps	62.93	0.00e+00	911.00
IUUC-Ont-072551	Oreochromis niloticus	32.64	1.00e-64	242.00
IUUC-Oan-073350	Ornithorhynchus anatinus	48.55	6.00e-98	351.00
IUUC-Ocu-074915	Oryctolagus cuniculus	63.27	0.00e+00	926.00
IUUC-Obr-076222	Oryza brachyantha	38.24	2.00e-04	39.30
IUUC-Ola-087360	Oryzias latipes	71.43	6.00e-18	84.30
IUUC-Oga-089106	Otolemur garnettii	62.85	0.00e+00	1426.00
IUUC-Oar-089289	Ovis aries	59.45	0.00e+00	1004.00
IUUC-Ptr-091469	Pan troglodytes	90.14	0.00e+00	2737.00
IUUC-Pan-091841	Papio anubis	97.92	0.00e+00	2434.00
IUUC-Psi-093842	Pelodiscus sinensis	47.86	7.00e-135	476.00
IUUC-Pma-094732	Petromyzon marinus	53.85	3.00e-08	51.60
IUUC-Pfo-097299	Poecilia formosa	37.90	1.00e-31	132.00
IUUC-Pab-098271	Pongo abelii	90.47	0.00e+00	2714.00
IUUC-Pca-100721	Procavia capensis	55.94	0.00e+00	904.00
IUUC-Pva-102276	Pteropus vampyrus	65.82	0.00e+00	1739.00
IUUC-Rno-105619	Rattus norvegicus	57.77	0.00e+00	1485.00
IUUC-Sha-106722	Sarcophilus harrisii	44.63	0.00e+00	1044.00
IUUC-Sar-113673	Sorex araneus	49.18	2.00e-68	254.00
IUUC-Sre-115039	Sporisorium reilianum	33.90	2.00e-04	40.00
IUUC-Ssc-115383	Sus scrofa	57.63	0.00e+00	1303.00
IUUC-Tgu-117243	Taeniopygia guttata	48.88	1.00e-93	337.00
IUUC-Tru-118092	Takifugu rubripes	38.43	5.00e-27	114.00
IUUC-Tsy-119362	Tarsius syrichta	66.94	0.00e+00	729.00
IUUC-Tni-120380	Tetraodon nigroviridis	73.47	5.00e-17	81.30
IUUC-Tbe-127404	Tupaia belangeri	51.68	0.00e+00	761.00
IUUC-Ttr-128317	Tursiops truncatus	64.53	0.00e+00	1607.00
IUUC-Uma-129640	Ustilago maydis	33.96	3.00e-03	35.80
IUUC-Xtr-132533	Xenopus tropicalis	39.26	1.00e-92	335.00
IUUC-Xma-134059	Xiphophorus maculatus	40.47	2.00e-34	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence